RNA–Protein interactions for RNA: ENST00000378615.7

C11orf49-202, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene C11orf49, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-202ENST00000378615 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
C11orf49-202ENST00000378615 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
C11orf49-202ENST00000378615 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
C11orf49-202ENST00000378615 CHMLP26374 656 aa12.58□□□□□ -0.4
C11orf49-202ENST00000378615 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
C11orf49-202ENST00000378615 SSH3Q8TE77 659 aa12.58□□□□□ -0.4
C11orf49-202ENST00000378615 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
C11orf49-202ENST00000378615 SOX12O15370 315 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 NEK4P51957 841 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
C11orf49-202ENST00000378615 EXOC6BQ9Y2D4 811 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 SPATA31A3Q5VYP0 1347 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 UBAP1LF5GYI3 381 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 ZSCAN23Q3MJ62 389 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 TMX3Q96JJ7 454 aa12.57□□□□□ -0.4
C11orf49-202ENST00000378615 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
C11orf49-202ENST00000378615 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
C11orf49-202ENST00000378615 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
C11orf49-202ENST00000378615 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
C11orf49-202ENST00000378615 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
C11orf49-202ENST00000378615 OVOS2A0A0G2JMS6 1433 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 PNMA6EA0A0J9YXQ4 647 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 NCLP19338 710 aaKnown RBP12.55□□□□□ -0.4
C11orf49-202ENST00000378615 POLA2Q14181 598 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 CAVIN1Q6NZI2 390 aaKnown RBP12.55□□□□□ -0.4
C11orf49-202ENST00000378615 ZSCAN30Q86W11 494 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 RILPL2Q969X0 211 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 KIF1BPQ96EK5 621 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
C11orf49-202ENST00000378615 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
C11orf49-202ENST00000378615 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
C11orf49-202ENST00000378615 PHF14O94880 888 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 BRD1O95696 1058 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
C11orf49-202ENST00000378615 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 ANO2Q9NQ90 1003 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 KDM3BQ7LBC6 1761 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 AK9Q5TCS8 1911 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
C11orf49-202ENST00000378615 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 IP6K1Q92551 441 aa12.54□□□□□ -0.4
C11orf49-202ENST00000378615 NAP1L5Q96NT1 182 aaPredicted RBP12.54□□□□□ -0.4
C11orf49-202ENST00000378615 LMO7Q8WWI1 1683 aa12.53□□□□□ -0.4
C11orf49-202ENST00000378615 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
C11orf49-202ENST00000378615 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
C11orf49-202ENST00000378615 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
C11orf49-202ENST00000378615 LTN1O94822 1766 aa12.53□□□□□ -0.4
C11orf49-202ENST00000378615 GCP02774 474 aa12.53□□□□□ -0.4
C11orf49-202ENST00000378615 PDIA4P13667 645 aaKnown RBP12.53□□□□□ -0.4
C11orf49-202ENST00000378615 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
C11orf49-202ENST00000378615 HSPA4P34932 840 aa12.53□□□□□ -0.4
C11orf49-202ENST00000378615 ZDHHC9Q9Y397 364 aa12.53□□□□□ -0.4
C11orf49-202ENST00000378615 SLIT3O75094 1523 aa12.52□□□□□ -0.4
C11orf49-202ENST00000378615 PLEKHG5O94827 1062 aa12.52□□□□□ -0.4
C11orf49-202ENST00000378615 TPM2P07951 284 aa12.52□□□□□ -0.4
C11orf49-202ENST00000378615 MCM5P33992 734 aa12.52□□□□□ -0.4
C11orf49-202ENST00000378615 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.4
C11orf49-202ENST00000378615 RUFY2Q8WXA3 655 aa12.52□□□□□ -0.4
C11orf49-202ENST00000378615 LRRC59Q96AG4 307 aaKnown RBP12.52□□□□□ -0.4
C11orf49-202ENST00000378615 PHLPP1O60346 1717 aa12.52□□□□□ -0.41
C11orf49-202ENST00000378615 TERF1P54274 439 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 RHPN1Q8TCX5 695 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 CRYBG1Q9Y4K1 1723 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 SURF6O75683 361 aaKnown RBP12.51□□□□□ -0.41
C11orf49-202ENST00000378615 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
C11orf49-202ENST00000378615 MTX1Q13505 466 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 PKP1Q13835 747 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 AKAP4Q5JQC9 854 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 PPP1R42Q7Z4L9 355 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 DNAAF4Q8WXU2 420 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 NFAT5O94916 1531 aa12.51□□□□□ -0.41
C11orf49-202ENST00000378615 RAD50Q92878 1312 aa12.5□□□□□ -0.41
C11orf49-202ENST00000378615 SGSM2O43147 1006 aa12.5□□□□□ -0.41
C11orf49-202ENST00000378615 ALDH1L1O75891 902 aa12.5□□□□□ -0.41
C11orf49-202ENST00000378615 GLRX3O76003 335 aaKnown RBP12.5□□□□□ -0.41
C11orf49-202ENST00000378615 LETM1O95202 739 aaPredicted RBP12.5□□□□□ -0.41
C11orf49-202ENST00000378615 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
C11orf49-202ENST00000378615 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
C11orf49-202ENST00000378615 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
C11orf49-202ENST00000378615 GPT2Q8TD30 523 aa12.5□□□□□ -0.41
C11orf49-202ENST00000378615 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
C11orf49-202ENST00000378615 ATP6V1DQ9Y5K8 247 aa12.5□□□□□ -0.41
C11orf49-202ENST00000378615 SRGAP3O43295 1099 aa12.49□□□□□ -0.41
C11orf49-202ENST00000378615 CSPP1Q1MSJ5 1256 aa12.49□□□□□ -0.41
C11orf49-202ENST00000378615 BEND3Q5T5X7 828 aa12.49□□□□□ -0.41
C11orf49-202ENST00000378615 FAM184AQ8NB25 1140 aa12.49□□□□□ -0.41
C11orf49-202ENST00000378615 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
C11orf49-202ENST00000378615 HIP1O00291 1037 aa12.48□□□□□ -0.41
C11orf49-202ENST00000378615 TEFQ10587 303 aa12.48□□□□□ -0.41
C11orf49-202ENST00000378615 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms