RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
PPM1B-204ENST00000378551 V9GYY5 206 aaPredicted RBP18.4■□□□□ 0.54
PPM1B-204ENST00000378551 NRDCO43847 1150 aa18.4■□□□□ 0.54
PPM1B-204ENST00000378551 CCDC192P0DO97 292 aa18.4■□□□□ 0.54
PPM1B-204ENST00000378551 CHST3Q7LGC8 479 aa18.4■□□□□ 0.54
PPM1B-204ENST00000378551 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.54
PPM1B-204ENST00000378551 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
PPM1B-204ENST00000378551 SNRKQ9NRH2 765 aa18.39■□□□□ 0.53
PPM1B-204ENST00000378551 PTPRCP08575 1304 aa18.39■□□□□ 0.53
PPM1B-204ENST00000378551 KCNQ3O43525 872 aa18.39■□□□□ 0.53
PPM1B-204ENST00000378551 CCDC73Q6ZRK6 1079 aa18.39■□□□□ 0.53
PPM1B-204ENST00000378551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.39■□□□□ 0.53
PPM1B-204ENST00000378551 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
PPM1B-204ENST00000378551 KDM5AP29375 1690 aaKnown RBP18.38■□□□□ 0.53
PPM1B-204ENST00000378551 ABCC1P33527 1531 aa18.38■□□□□ 0.53
PPM1B-204ENST00000378551 SMC2O95347 1197 aa18.38■□□□□ 0.53
PPM1B-204ENST00000378551 KIF2CQ99661 725 aa18.38■□□□□ 0.53
PPM1B-204ENST00000378551 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
PPM1B-204ENST00000378551 ZKSCAN5Q9Y2L8 839 aa18.38■□□□□ 0.53
PPM1B-204ENST00000378551 KAT6BQ8WYB5 2073 aa18.38■□□□□ 0.53
PPM1B-204ENST00000378551 BIN1O00499 593 aa18.37■□□□□ 0.53
PPM1B-204ENST00000378551 MYD88Q99836 296 aa18.37■□□□□ 0.53
PPM1B-204ENST00000378551 CCDC183Q5T5S1 534 aa18.37■□□□□ 0.53
PPM1B-204ENST00000378551 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
PPM1B-204ENST00000378551 ERCC4Q92889 916 aaPredicted RBP18.37■□□□□ 0.53
PPM1B-204ENST00000378551 PES1O00541 588 aaKnown RBP18.37■□□□□ 0.53
PPM1B-204ENST00000378551 SYT1P21579 422 aa18.37■□□□□ 0.53
PPM1B-204ENST00000378551 CHL1O00533 1208 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 GLRX3O76003 335 aaKnown RBP18.36■□□□□ 0.53
PPM1B-204ENST00000378551 HAND2P61296 217 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 TTLL5Q6EMB2 1281 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 PHF23Q9BUL5 403 aaPredicted RBP18.36■□□□□ 0.53
PPM1B-204ENST00000378551 TMX1Q9H3N1 280 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 ABCC4O15439 1325 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 ATP8B2P98198 1209 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 HSP90AA4PQ58FG1 418 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 MTMR7Q9Y216 660 aa18.36■□□□□ 0.53
PPM1B-204ENST00000378551 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
PPM1B-204ENST00000378551 PLEKHO1Q53GL0 409 aaPredicted RBP18.35■□□□□ 0.53
PPM1B-204ENST00000378551 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
PPM1B-204ENST00000378551 ZSCAN22P10073 491 aaPredicted RBP18.34■□□□□ 0.53
PPM1B-204ENST00000378551 MAP3K11Q16584 847 aa18.34■□□□□ 0.53
PPM1B-204ENST00000378551 LUZP1Q86V48 1076 aa18.34■□□□□ 0.53
PPM1B-204ENST00000378551 PSMA5P28066 241 aa18.34■□□□□ 0.53
PPM1B-204ENST00000378551 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
PPM1B-204ENST00000378551 A0A087WWV3 80 aa18.33■□□□□ 0.53
PPM1B-204ENST00000378551 KINO60870 393 aaKnown RBP18.33■□□□□ 0.53
PPM1B-204ENST00000378551 UBE3BQ7Z3V4 1068 aa18.33■□□□□ 0.53
PPM1B-204ENST00000378551 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.53
PPM1B-204ENST00000378551 RTL1A6NKG5 1358 aa18.33■□□□□ 0.53
PPM1B-204ENST00000378551 ECHDC1Q9NTX5 307 aa18.33■□□□□ 0.52
PPM1B-204ENST00000378551 DACT1Q9NYF0 836 aa18.33■□□□□ 0.52
PPM1B-204ENST00000378551 HDAC5Q9UQL6 1122 aa18.33■□□□□ 0.52
PPM1B-204ENST00000378551 KIF3AQ9Y496 699 aa18.33■□□□□ 0.52
PPM1B-204ENST00000378551 OFD1O75665 1012 aa18.33■□□□□ 0.52
PPM1B-204ENST00000378551 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.52
PPM1B-204ENST00000378551 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
PPM1B-204ENST00000378551 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
PPM1B-204ENST00000378551 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
PPM1B-204ENST00000378551 PDILTQ8N807 584 aa18.32■□□□□ 0.52
PPM1B-204ENST00000378551 PDCL3Q9H2J4 239 aa18.32■□□□□ 0.52
PPM1B-204ENST00000378551 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
PPM1B-204ENST00000378551 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
PPM1B-204ENST00000378551 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
PPM1B-204ENST00000378551 CCDC186Q7Z3E2 898 aa18.31■□□□□ 0.52
PPM1B-204ENST00000378551 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
PPM1B-204ENST00000378551 BRF1Q92994 677 aa18.3■□□□□ 0.52
PPM1B-204ENST00000378551 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
PPM1B-204ENST00000378551 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
PPM1B-204ENST00000378551 POLR3DP05423 398 aaPredicted RBP18.3■□□□□ 0.52
PPM1B-204ENST00000378551 PTGS1P23219 599 aa18.3■□□□□ 0.52
PPM1B-204ENST00000378551 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
PPM1B-204ENST00000378551 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
PPM1B-204ENST00000378551 DNAJC25Q9H1X3 360 aa18.3■□□□□ 0.52
PPM1B-204ENST00000378551 PDCP20941 246 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 TRERF1Q96PN7 1200 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 NMIQ13287 307 aaPredicted RBP18.29■□□□□ 0.52
PPM1B-204ENST00000378551 STK38Q15208 465 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 USP44Q9H0E7 712 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 F13A1P00488 732 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 SKIDA1Q1XH10 827 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 SYNE3Q6ZMZ3 975 aa18.29■□□□□ 0.52
PPM1B-204ENST00000378551 RALYLQ86SE5 291 aaKnown RBP18.29■□□□□ 0.52
PPM1B-204ENST00000378551 PDCL2Q8N4E4 241 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 ZBTB3Q9H5J0 574 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 GOLIM4O00461 696 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 ANO6Q4KMQ2 910 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 ERICH4A6NGS2 130 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 TRPM2O94759 1503 aa18.28■□□□□ 0.52
PPM1B-204ENST00000378551 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
PPM1B-204ENST00000378551 UBE2HP62256 183 aa18.27■□□□□ 0.52
PPM1B-204ENST00000378551 PRAMEF22A3QJZ6 481 aa18.27■□□□□ 0.52
PPM1B-204ENST00000378551 ZNF165P49910 485 aa18.27■□□□□ 0.52
PPM1B-204ENST00000378551 PTH1RQ03431 593 aa18.27■□□□□ 0.52
PPM1B-204ENST00000378551 CABLES1Q8TDN4 633 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms