RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 DNAJC10Q8IXB1 793 aa20.2■□□□□ 0.82
CCDC107-204ENST00000378409 SLC4A9Q96Q91 983 aa20.2■□□□□ 0.82
CCDC107-204ENST00000378409 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
CCDC107-204ENST00000378409 KIF16BQ96L93 1317 aa20.2■□□□□ 0.82
CCDC107-204ENST00000378409 LOC102724428A0A0B4J2F2 783 aa20.19■□□□□ 0.82
CCDC107-204ENST00000378409 SLC4A2P04920 1241 aa20.19■□□□□ 0.82
CCDC107-204ENST00000378409 SIK1P57059 783 aa20.19■□□□□ 0.82
CCDC107-204ENST00000378409 TEX13AQ9BXU3 409 aaPredicted RBP20.19■□□□□ 0.82
CCDC107-204ENST00000378409 ATP6V1AP38606 617 aa20.18■□□□□ 0.82
CCDC107-204ENST00000378409 NOB1Q9ULX3 412 aaKnown RBP20.18■□□□□ 0.82
CCDC107-204ENST00000378409 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
CCDC107-204ENST00000378409 DBF4Q9UBU7 674 aaPredicted RBP20.17■□□□□ 0.82
CCDC107-204ENST00000378409 MYH14Q7Z406 1995 aaKnown RBP20.16■□□□□ 0.82
CCDC107-204ENST00000378409 ANXA1P04083 346 aa20.16■□□□□ 0.82
CCDC107-204ENST00000378409 ZKSCAN2Q63HK3 967 aa20.16■□□□□ 0.82
CCDC107-204ENST00000378409 EP400Q96L91 3159 aa20.16■□□□□ 0.82
CCDC107-204ENST00000378409 IPO8O15397 1037 aaKnown RBP20.15■□□□□ 0.82
CCDC107-204ENST00000378409 STARD3NLO95772 234 aa20.15■□□□□ 0.82
CCDC107-204ENST00000378409 NEFLP07196 543 aa20.15■□□□□ 0.82
CCDC107-204ENST00000378409 IRX6P78412 446 aaPredicted RBP20.15■□□□□ 0.82
CCDC107-204ENST00000378409 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
CCDC107-204ENST00000378409 G2E3Q7L622 706 aa20.15■□□□□ 0.82
CCDC107-204ENST00000378409 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC107-204ENST00000378409 RREB1Q92766 1687 aa20.15■□□□□ 0.82
CCDC107-204ENST00000378409 ERBB4Q15303 1308 aa20.14■□□□□ 0.81
CCDC107-204ENST00000378409 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
CCDC107-204ENST00000378409 ITPK1Q13572 414 aa20.14■□□□□ 0.81
CCDC107-204ENST00000378409 RGPD3A6NKT7 1758 aaPredicted RBP20.13■□□□□ 0.81
CCDC107-204ENST00000378409 RGPD4Q7Z3J3 1758 aa20.13■□□□□ 0.81
CCDC107-204ENST00000378409 A1BGP04217 495 aa20.13■□□□□ 0.81
CCDC107-204ENST00000378409 CYP19A1P11511 503 aaPredicted RBP20.13■□□□□ 0.81
CCDC107-204ENST00000378409 MYL6BP14649 208 aa20.13■□□□□ 0.81
CCDC107-204ENST00000378409 PDIA6Q15084 440 aa20.13■□□□□ 0.81
CCDC107-204ENST00000378409 HYPKQ9NX55 129 aa20.13■□□□□ 0.81
CCDC107-204ENST00000378409 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
CCDC107-204ENST00000378409 PTPRCP08575 1304 aa20.12■□□□□ 0.81
CCDC107-204ENST00000378409 KCNQ4P56696 695 aa20.12■□□□□ 0.81
CCDC107-204ENST00000378409 FLIIQ13045 1269 aa20.12■□□□□ 0.81
CCDC107-204ENST00000378409 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
CCDC107-204ENST00000378409 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
CCDC107-204ENST00000378409 TNNQ9UQP3 1299 aa20.12■□□□□ 0.81
CCDC107-204ENST00000378409 NBPF26B4DH59 902 aa20.11■□□□□ 0.81
CCDC107-204ENST00000378409 APBA3O96018 575 aa20.11■□□□□ 0.81
CCDC107-204ENST00000378409 TRIM27P14373 513 aa20.11■□□□□ 0.81
CCDC107-204ENST00000378409 NBPF14Q5TI25 921 aa20.11■□□□□ 0.81
CCDC107-204ENST00000378409 NBPF10Q6P3W6 841 aaKnown RBP20.11■□□□□ 0.81
CCDC107-204ENST00000378409 NBPF15Q8N660 670 aa20.11■□□□□ 0.81
CCDC107-204ENST00000378409 ARHGAP45Q92619 1136 aa20.11■□□□□ 0.81
CCDC107-204ENST00000378409 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
CCDC107-204ENST00000378409 FKBP5Q13451 457 aaPredicted RBP20.1■□□□□ 0.81
CCDC107-204ENST00000378409 C20orf194Q5TEA3 1177 aa20.1■□□□□ 0.81
CCDC107-204ENST00000378409 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
CCDC107-204ENST00000378409 LINC00116Q8NCU8 138 aa20.1■□□□□ 0.81
CCDC107-204ENST00000378409 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
CCDC107-204ENST00000378409 API5Q9BZZ5 524 aaKnown RBP20.1■□□□□ 0.81
CCDC107-204ENST00000378409 ARFGEF2Q9Y6D5 1785 aa20.1■□□□□ 0.81
CCDC107-204ENST00000378409 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
CCDC107-204ENST00000378409 MS4A1P11836 297 aa20.09■□□□□ 0.81
CCDC107-204ENST00000378409 CCDC87Q9NVE4 849 aa20.09■□□□□ 0.81
CCDC107-204ENST00000378409 NUP188Q5SRE5 1749 aa20.08■□□□□ 0.81
CCDC107-204ENST00000378409 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
CCDC107-204ENST00000378409 AIMP1Q12904 312 aaKnown RBP20.08■□□□□ 0.81
CCDC107-204ENST00000378409 PDE3AQ14432 1141 aa20.08■□□□□ 0.81
CCDC107-204ENST00000378409 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
CCDC107-204ENST00000378409 PANK1Q8TE04 598 aa20.08■□□□□ 0.81
CCDC107-204ENST00000378409 XAGE3Q8WTP9 111 aa20.08■□□□□ 0.81
CCDC107-204ENST00000378409 ZBTB1Q9Y2K1 713 aa20.08■□□□□ 0.81
CCDC107-204ENST00000378409 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.81
CCDC107-204ENST00000378409 PLSCR1O15162 318 aa20.07■□□□□ 0.8
CCDC107-204ENST00000378409 RLBP1P12271 317 aa20.07■□□□□ 0.8
CCDC107-204ENST00000378409 LRP10Q7Z4F1 713 aa20.07■□□□□ 0.8
CCDC107-204ENST00000378409 FKBP8Q14318 412 aa20.06■□□□□ 0.8
CCDC107-204ENST00000378409 TXNRD1Q16881 649 aa20.06■□□□□ 0.8
CCDC107-204ENST00000378409 SLC27A3Q5K4L6 730 aa20.06■□□□□ 0.8
CCDC107-204ENST00000378409 INTS5Q6P9B9 1019 aaKnown RBP20.06■□□□□ 0.8
CCDC107-204ENST00000378409 COPS6Q7L5N1 327 aa20.06■□□□□ 0.8
CCDC107-204ENST00000378409 ABCC4O15439 1325 aa20.05■□□□□ 0.8
CCDC107-204ENST00000378409 AFDNP55196 1824 aaKnown RBP20.05■□□□□ 0.8
CCDC107-204ENST00000378409 F6X3S4 739 aa20.05■□□□□ 0.8
CCDC107-204ENST00000378409 DDX58O95786 925 aaKnown RBP20.05■□□□□ 0.8
CCDC107-204ENST00000378409 LRRC4BQ9NT99 713 aa20.05■□□□□ 0.8
CCDC107-204ENST00000378409 CNTNAP4Q9C0A0 1308 aa20.04■□□□□ 0.8
CCDC107-204ENST00000378409 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
CCDC107-204ENST00000378409 CRBNQ96SW2 442 aa20.04■□□□□ 0.8
CCDC107-204ENST00000378409 UBR3Q6ZT12 1888 aa20.04■□□□□ 0.8
CCDC107-204ENST00000378409 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
CCDC107-204ENST00000378409 IL6STP40189 918 aaPredicted RBP20.03■□□□□ 0.8
CCDC107-204ENST00000378409 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
CCDC107-204ENST00000378409 TMEM57Q8N5G2 664 aa20.03■□□□□ 0.8
CCDC107-204ENST00000378409 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
CCDC107-204ENST00000378409 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
CCDC107-204ENST00000378409 NUP98P52948 1817 aa20.03■□□□□ 0.8
CCDC107-204ENST00000378409 ADCY9O60503 1353 aa20.03■□□□□ 0.8
CCDC107-204ENST00000378409 RC3H1Q5TC82 1133 aaKnown RBP20.02■□□□□ 0.8
CCDC107-204ENST00000378409 KSR2Q6VAB6 950 aa20.02■□□□□ 0.8
CCDC107-204ENST00000378409 TTLL7Q6ZT98 887 aa20.02■□□□□ 0.8
CCDC107-204ENST00000378409 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
CCDC107-204ENST00000378409 PROM2Q8N271 834 aa20.02■□□□□ 0.8
CCDC107-204ENST00000378409 ARXQ96QS3 562 aa20.02■□□□□ 0.8
CCDC107-204ENST00000378409 PXDNLA1KZ92 1463 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms