RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 SPZ1Q9BXG8 430 aa3.99□□□□□ -1.77
PKHD1L1-201ENST00000378402 ZNF148Q9UQR1 794 aa3.99□□□□□ -1.77
PKHD1L1-201ENST00000378402 BECN2A8MW95 431 aa3.99□□□□□ -1.77
PKHD1L1-201ENST00000378402 IFT74Q96LB3 600 aa3.99□□□□□ -1.77
PKHD1L1-201ENST00000378402 A1CFQ9NQ94 594 aaKnown RBP3.99□□□□□ -1.77
PKHD1L1-201ENST00000378402 PRC1O43663 620 aa3.99□□□□□ -1.77
PKHD1L1-201ENST00000378402 CTDP1Q9Y5B0 961 aaPredicted RBP3.99□□□□□ -1.77
PKHD1L1-201ENST00000378402 PPFIA2O75334 1257 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 CDKL5O76039 1030 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 G3BP1Q13283 466 aaKnown RBP eCLIP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 TSHZ1Q6ZSZ6 1077 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 ANKRD13AQ8IZ07 590 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 BICD2Q8TD16 824 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC47Q96A33 483 aaKnown RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 FAM184BQ9ULE4 1060 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 HDGFL1Q5TGJ6 251 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 ZNF513Q8N8E2 541 aaPredicted RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC92Q53HC0 331 aaPredicted RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 CFAP58Q5T655 872 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 TMCO4Q5TGY1 634 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 SMARCE1Q969G3 411 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 CDCA5Q96FF9 252 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 GCOM1H8Y6P7 765 aaPredicted RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 KDM1AO60341 852 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 LRRFIP1Q32MZ4 808 aaKnown RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 PSMA4P25789 261 aaKnown RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 CACNA2D4Q7Z3S7 1137 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 NOC3LQ8WTT2 800 aaKnown RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 TUBA3CQ13748 450 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 HOOK3Q86VS8 718 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 CFAP61Q8NHU2 1237 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 UTP6Q9NYH9 597 aaKnown RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 NCOA2Q15596 1464 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 SLC8A3P57103 927 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 PTPN14Q15678 1187 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 FCHSD1Q86WN1 690 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 MSL3P1P0C860 447 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 LRRCC1Q9C099 1032 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 NPC1L1Q9UHC9 1359 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 DESP17661 470 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 TRIM21P19474 475 aaKnown RBP3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 ZNF365Q70YC5 407 aa3.98□□□□□ -1.77
PKHD1L1-201ENST00000378402 SRRM3A6NNA2 597 aaPredicted RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 NDC80O14777 642 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 OPA1O60313 960 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 ANKRD1Q15327 319 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 LRSAM1Q6UWE0 723 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 CEP128Q6ZU80 1094 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 LMNTD2Q8IXW0 634 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 GCC1Q96CN9 775 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 JAKMIP1Q96N16 626 aaKnown RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 BRD3Q15059 726 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 NBPF15Q8N660 670 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 DIABLOQ9NR28 239 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 NCAPD3P42695 1498 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 CHUKO15111 745 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 SLU7O95391 586 aaKnown RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC174Q6PII3 467 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 SREK1Q8WXA9 508 aaKnown RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 INTS4Q96HW7 963 aaKnown RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 CFAP57Q96MR6 1250 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 SMC6Q96SB8 1091 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 ANKRD36BQ8N2N9 1353 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 NONOQ15233 471 aaKnown RBP eCLIP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 INTS3Q68E01 1043 aaKnown RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 RSPH3Q86UC2 560 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 MAGEA8P43361 318 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 RGS3P49796 1198 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 OTUD6AQ7L8S5 288 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC28BQ9BUN5 200 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 ARHGAP31Q2M1Z3 1444 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 E7ENQ6 273 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 DEUP1Q05D60 604 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 MCTP2Q6DN12 878 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 NAA16Q6N069 864 aaPredicted RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 NDUFA13Q9P0J0 144 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC141Q6ZP82 1450 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 XRCC6P12956 609 aaKnown RBP eCLIP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 MAP7D1Q3KQU3 841 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC186Q7Z3E2 898 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 BRPF3Q9ULD4 1205 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 TSPY2A6NKD2 308 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 TSPY3P0CV98 308 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 TSPY8P0CW00 308 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 GTF2E1P29083 439 aaPredicted RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 TSPY1Q01534 308 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 MSH5O43196 834 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 SCAND2PQ9GZW5 306 aaPredicted RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 ACTR5Q9H9F9 607 aaPredicted RBP3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 FAN1Q9Y2M0 1017 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 PPFIA1Q13136 1202 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 EXOC8Q8IYI6 725 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 MPHOSPH8Q99549 860 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 KDM5DQ9BY66 1539 aa3.97□□□□□ -1.77
PKHD1L1-201ENST00000378402 E2F6O75461 281 aa3.96□□□□□ -1.77
PKHD1L1-201ENST00000378402 TERF2Q15554 542 aa3.96□□□□□ -1.77
PKHD1L1-201ENST00000378402 RCSD1Q6JBY9 416 aa3.96□□□□□ -1.77
PKHD1L1-201ENST00000378402 P3H3Q8IVL6 736 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms