RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
CBWD3-203ENST00000377344 STARD3NLO95772 234 aa16.55■□□□□ 0.24
CBWD3-203ENST00000377344 ANXA1P04083 346 aa16.55■□□□□ 0.24
CBWD3-203ENST00000377344 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-203ENST00000377344 MYL6BP14649 208 aa16.54■□□□□ 0.24
CBWD3-203ENST00000377344 KCNQ4P56696 695 aa16.54■□□□□ 0.24
CBWD3-203ENST00000377344 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-203ENST00000377344 RNF123Q5XPI4 1314 aa16.54■□□□□ 0.24
CBWD3-203ENST00000377344 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
CBWD3-203ENST00000377344 APBA3O96018 575 aa16.54■□□□□ 0.24
CBWD3-203ENST00000377344 A1BGP04217 495 aa16.54■□□□□ 0.24
CBWD3-203ENST00000377344 NEFLP07196 543 aa16.54■□□□□ 0.24
CBWD3-203ENST00000377344 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-203ENST00000377344 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-203ENST00000377344 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
CBWD3-203ENST00000377344 ZKSCAN2Q63HK3 967 aa16.53■□□□□ 0.24
CBWD3-203ENST00000377344 PHAXQ9H814 394 aaKnown RBP16.53■□□□□ 0.24
CBWD3-203ENST00000377344 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
CBWD3-203ENST00000377344 TJP1Q07157 1748 aa16.52■□□□□ 0.24
CBWD3-203ENST00000377344 CYP19A1P11511 503 aaPredicted RBP16.52■□□□□ 0.24
CBWD3-203ENST00000377344 ITPK1Q13572 414 aa16.52■□□□□ 0.24
CBWD3-203ENST00000377344 G2E3Q7L622 706 aa16.52■□□□□ 0.24
CBWD3-203ENST00000377344 FLIIQ13045 1269 aa16.52■□□□□ 0.23
CBWD3-203ENST00000377344 PDIA6Q15084 440 aa16.52■□□□□ 0.23
CBWD3-203ENST00000377344 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.23
CBWD3-203ENST00000377344 HYPKQ9NX55 129 aa16.52■□□□□ 0.23
CBWD3-203ENST00000377344 ZNF330Q9Y3S2 320 aaPredicted RBP16.52■□□□□ 0.23
CBWD3-203ENST00000377344 FKBP5Q13451 457 aaPredicted RBP16.51■□□□□ 0.23
CBWD3-203ENST00000377344 ATF7IPQ6VMQ6 1270 aa16.51■□□□□ 0.23
CBWD3-203ENST00000377344 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
CBWD3-203ENST00000377344 LY75O60449 1722 aa16.5■□□□□ 0.23
CBWD3-203ENST00000377344 TRIM27P14373 513 aa16.5■□□□□ 0.23
CBWD3-203ENST00000377344 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
CBWD3-203ENST00000377344 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
CBWD3-203ENST00000377344 PTPRCP08575 1304 aa16.5■□□□□ 0.23
CBWD3-203ENST00000377344 NBPF26B4DH59 902 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
CBWD3-203ENST00000377344 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 NBPF14Q5TI25 921 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 NBPF10Q6P3W6 841 aaKnown RBP16.49■□□□□ 0.23
CBWD3-203ENST00000377344 NBPF15Q8N660 670 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 TNNQ9UQP3 1299 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 SF3B2Q13435 895 aaKnown RBP16.49■□□□□ 0.23
CBWD3-203ENST00000377344 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
CBWD3-203ENST00000377344 ZNF831Q5JPB2 1677 aa16.49■□□□□ 0.23
CBWD3-203ENST00000377344 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
CBWD3-203ENST00000377344 PANK1Q8TE04 598 aa16.48■□□□□ 0.23
CBWD3-203ENST00000377344 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
CBWD3-203ENST00000377344 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
CBWD3-203ENST00000377344 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
CBWD3-203ENST00000377344 PLSCR1O15162 318 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 MS4A1P11836 297 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 COPS6Q7L5N1 327 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
CBWD3-203ENST00000377344 XAGE3Q8WTP9 111 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 ARXQ96QS3 562 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 CICQ96RK0 1608 aaPredicted RBP16.47■□□□□ 0.23
CBWD3-203ENST00000377344 FKBP8Q14318 412 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
CBWD3-203ENST00000377344 COL5A3P25940 1745 aaPredicted RBP16.46■□□□□ 0.23
CBWD3-203ENST00000377344 DDX58O95786 925 aaKnown RBP16.46■□□□□ 0.23
CBWD3-203ENST00000377344 PDE3AQ14432 1141 aa16.46■□□□□ 0.23
CBWD3-203ENST00000377344 INTS5Q6P9B9 1019 aaKnown RBP16.46■□□□□ 0.23
CBWD3-203ENST00000377344 F6X3S4 739 aa16.45■□□□□ 0.22
CBWD3-203ENST00000377344 RLBP1P12271 317 aa16.45■□□□□ 0.22
CBWD3-203ENST00000377344 SLC4A10Q6U841 1118 aa16.45■□□□□ 0.22
CBWD3-203ENST00000377344 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
CBWD3-203ENST00000377344 PI4KAP2A4QPH2 592 aa16.45■□□□□ 0.22
CBWD3-203ENST00000377344 PI4KAP1Q8N8J0 262 aa16.45■□□□□ 0.22
CBWD3-203ENST00000377344 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
CBWD3-203ENST00000377344 PROM2Q8N271 834 aa16.44■□□□□ 0.22
CBWD3-203ENST00000377344 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
CBWD3-203ENST00000377344 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
CBWD3-203ENST00000377344 EN1Q05925 392 aaPredicted RBP16.43■□□□□ 0.22
CBWD3-203ENST00000377344 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
CBWD3-203ENST00000377344 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
CBWD3-203ENST00000377344 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
CBWD3-203ENST00000377344 TAF1LQ8IZX4 1826 aa16.43■□□□□ 0.22
CBWD3-203ENST00000377344 GNPATO15228 680 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 BAG6P46379 1132 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 KSR2Q6VAB6 950 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 ANKRD13DQ6ZTN6 518 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 AK7Q96M32 723 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 CRBNQ96SW2 442 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 ABCC4O15439 1325 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
CBWD3-203ENST00000377344 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 DNAAF4Q8WXU2 420 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 MYH14Q7Z406 1995 aaKnown RBP16.42■□□□□ 0.22
CBWD3-203ENST00000377344 ADCY9O60503 1353 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
CBWD3-203ENST00000377344 EIF5P55010 431 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms