RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 ERBB4Q15303 1308 aa16.96■□□□□ 0.3
TIMP1-202ENST00000377017 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
TIMP1-202ENST00000377017 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
TIMP1-202ENST00000377017 EIF2S2P20042 333 aaKnown RBP16.95■□□□□ 0.3
TIMP1-202ENST00000377017 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
TIMP1-202ENST00000377017 PROM2Q8N271 834 aa16.95■□□□□ 0.3
TIMP1-202ENST00000377017 LRRC4BQ9NT99 713 aa16.95■□□□□ 0.3
TIMP1-202ENST00000377017 USP16Q9Y5T5 823 aa16.95■□□□□ 0.3
TIMP1-202ENST00000377017 NUP188Q5SRE5 1749 aa16.95■□□□□ 0.3
TIMP1-202ENST00000377017 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
TIMP1-202ENST00000377017 KCNQ4P56696 695 aa16.94■□□□□ 0.3
TIMP1-202ENST00000377017 LINC00116Q8NCU8 138 aa16.94■□□□□ 0.3
TIMP1-202ENST00000377017 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
TIMP1-202ENST00000377017 VAMP4O75379 141 aa16.93■□□□□ 0.3
TIMP1-202ENST00000377017 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
TIMP1-202ENST00000377017 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
TIMP1-202ENST00000377017 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
TIMP1-202ENST00000377017 AK7Q96M32 723 aa16.93■□□□□ 0.3
TIMP1-202ENST00000377017 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
TIMP1-202ENST00000377017 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
TIMP1-202ENST00000377017 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
TIMP1-202ENST00000377017 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
TIMP1-202ENST00000377017 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
TIMP1-202ENST00000377017 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
TIMP1-202ENST00000377017 GNPATO15228 680 aa16.9■□□□□ 0.3
TIMP1-202ENST00000377017 STK32BQ9NY57 414 aa16.9■□□□□ 0.3
TIMP1-202ENST00000377017 ZBTB1Q9Y2K1 713 aa16.9■□□□□ 0.3
TIMP1-202ENST00000377017 A1BGP04217 495 aa16.89■□□□□ 0.29
TIMP1-202ENST00000377017 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
TIMP1-202ENST00000377017 ALDH1L2Q3SY69 923 aa16.89■□□□□ 0.29
TIMP1-202ENST00000377017 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
TIMP1-202ENST00000377017 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
TIMP1-202ENST00000377017 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
TIMP1-202ENST00000377017 RTCBQ9Y3I0 505 aaKnown RBP16.89■□□□□ 0.29
TIMP1-202ENST00000377017 RPS6KA4O75676 772 aa16.88■□□□□ 0.29
TIMP1-202ENST00000377017 IL6STP40189 918 aaPredicted RBP16.88■□□□□ 0.29
TIMP1-202ENST00000377017 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
TIMP1-202ENST00000377017 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
TIMP1-202ENST00000377017 A0A087WZG4 1122 aa16.87■□□□□ 0.29
TIMP1-202ENST00000377017 SOCS7O14512 581 aa16.87■□□□□ 0.29
TIMP1-202ENST00000377017 MYL6BP14649 208 aa16.87■□□□□ 0.29
TIMP1-202ENST00000377017 ADRA2BP18089 450 aa16.87■□□□□ 0.29
TIMP1-202ENST00000377017 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
TIMP1-202ENST00000377017 TFCP2L1Q9NZI6 479 aa16.87■□□□□ 0.29
TIMP1-202ENST00000377017 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
TIMP1-202ENST00000377017 NBPF26B4DH59 902 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 SSFA2P28290 1259 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 NBPF10Q6P3W6 841 aaKnown RBP16.86■□□□□ 0.29
TIMP1-202ENST00000377017 NBPF15Q8N660 670 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 QSER1Q2KHR3 1735 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 COL15A1P39059 1388 aa16.86■□□□□ 0.29
TIMP1-202ENST00000377017 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
TIMP1-202ENST00000377017 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
TIMP1-202ENST00000377017 PDIA6Q15084 440 aa16.85■□□□□ 0.29
TIMP1-202ENST00000377017 ZNF827Q17R98 1081 aa16.85■□□□□ 0.29
TIMP1-202ENST00000377017 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
TIMP1-202ENST00000377017 TUBGCP6Q96RT7 1819 aa16.84■□□□□ 0.29
TIMP1-202ENST00000377017 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
TIMP1-202ENST00000377017 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
TIMP1-202ENST00000377017 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
TIMP1-202ENST00000377017 TRAPPC3LQ5T215 181 aa16.84■□□□□ 0.29
TIMP1-202ENST00000377017 ANO8Q9HCE9 1232 aaPredicted RBP16.84■□□□□ 0.29
TIMP1-202ENST00000377017 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
TIMP1-202ENST00000377017 PHF14O94880 888 aa16.83■□□□□ 0.28
TIMP1-202ENST00000377017 ANXA1P04083 346 aa16.83■□□□□ 0.28
TIMP1-202ENST00000377017 KIF6Q6ZMV9 814 aa16.83■□□□□ 0.28
TIMP1-202ENST00000377017 KIF16BQ96L93 1317 aa16.83■□□□□ 0.28
TIMP1-202ENST00000377017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
TIMP1-202ENST00000377017 DDX58O95786 925 aaKnown RBP16.82■□□□□ 0.28
TIMP1-202ENST00000377017 CENPBP07199 599 aaPredicted RBP16.82■□□□□ 0.28
TIMP1-202ENST00000377017 RFC4P35249 363 aa16.82■□□□□ 0.28
TIMP1-202ENST00000377017 BRPF1P55201 1214 aaPredicted RBP16.82■□□□□ 0.28
TIMP1-202ENST00000377017 MRPL50Q8N5N7 158 aaKnown RBP16.82■□□□□ 0.28
TIMP1-202ENST00000377017 ARXQ96QS3 562 aa16.82■□□□□ 0.28
TIMP1-202ENST00000377017 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
TIMP1-202ENST00000377017 C4AP0C0L4 1744 aa16.82■□□□□ 0.28
TIMP1-202ENST00000377017 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
TIMP1-202ENST00000377017 FLIIQ13045 1269 aa16.81■□□□□ 0.28
TIMP1-202ENST00000377017 COPS6Q7L5N1 327 aa16.81■□□□□ 0.28
TIMP1-202ENST00000377017 LRP10Q7Z4F1 713 aa16.81■□□□□ 0.28
TIMP1-202ENST00000377017 DZIP3Q86Y13 1208 aaKnown RBP16.81■□□□□ 0.28
TIMP1-202ENST00000377017 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
TIMP1-202ENST00000377017 PTPRCP08575 1304 aa16.8■□□□□ 0.28
TIMP1-202ENST00000377017 ZPR1O75312 459 aa16.8■□□□□ 0.28
TIMP1-202ENST00000377017 PHAXQ9H814 394 aaKnown RBP16.8■□□□□ 0.28
TIMP1-202ENST00000377017 BCORQ6W2J9 1755 aa16.79■□□□□ 0.28
TIMP1-202ENST00000377017 SCN7AQ01118 1682 aa16.79■□□□□ 0.28
TIMP1-202ENST00000377017 PNPLA7Q6ZV29 1317 aa16.79■□□□□ 0.28
TIMP1-202ENST00000377017 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
TIMP1-202ENST00000377017 MSH5O43196 834 aa16.79■□□□□ 0.28
TIMP1-202ENST00000377017 FKBP5Q13451 457 aaPredicted RBP16.79■□□□□ 0.28
TIMP1-202ENST00000377017 ARHGEF1Q92888 912 aaKnown RBP16.79■□□□□ 0.28
TIMP1-202ENST00000377017 ZNF652Q9Y2D9 606 aa16.79■□□□□ 0.28
TIMP1-202ENST00000377017 MAP3K15Q6ZN16 1313 aa16.78■□□□□ 0.28
TIMP1-202ENST00000377017 ERVV-1B6SEH8 477 aa16.78■□□□□ 0.28
TIMP1-202ENST00000377017 RGL2O15211 777 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms