RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 QTRT2Q9H974 415 aaKnown RBP13.4□□□□□ -0.26
PDPN-203ENST00000376061 TNNQ9UQP3 1299 aa13.4□□□□□ -0.26
PDPN-203ENST00000376061 CICQ96RK0 1608 aaPredicted RBP13.39□□□□□ -0.27
PDPN-203ENST00000376061 BTAF1O14981 1849 aa13.39□□□□□ -0.27
PDPN-203ENST00000376061 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
PDPN-203ENST00000376061 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
PDPN-203ENST00000376061 PIGBQ92521 554 aa13.39□□□□□ -0.27
PDPN-203ENST00000376061 NOB1Q9ULX3 412 aaKnown RBP13.39□□□□□ -0.27
PDPN-203ENST00000376061 RGS12O14924 1447 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 TRIM27P14373 513 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 ERICH6BQ5W0A0 696 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
PDPN-203ENST00000376061 ATF7IPQ6VMQ6 1270 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 CRBNQ96SW2 442 aa13.38□□□□□ -0.27
PDPN-203ENST00000376061 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
PDPN-203ENST00000376061 RLBP1P12271 317 aa13.37□□□□□ -0.27
PDPN-203ENST00000376061 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
PDPN-203ENST00000376061 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
PDPN-203ENST00000376061 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
PDPN-203ENST00000376061 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
PDPN-203ENST00000376061 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
PDPN-203ENST00000376061 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
PDPN-203ENST00000376061 SEPT12Q8IYM1 358 aa13.36□□□□□ -0.27
PDPN-203ENST00000376061 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
PDPN-203ENST00000376061 ASAP1Q9ULH1 1129 aa13.36□□□□□ -0.27
PDPN-203ENST00000376061 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
PDPN-203ENST00000376061 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
PDPN-203ENST00000376061 EIF2S2P20042 333 aaKnown RBP13.35□□□□□ -0.27
PDPN-203ENST00000376061 ARHGAP45Q92619 1136 aa13.35□□□□□ -0.27
PDPN-203ENST00000376061 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
PDPN-203ENST00000376061 ACSBG1Q96GR2 724 aa13.35□□□□□ -0.27
PDPN-203ENST00000376061 CHPF2Q9P2E5 772 aa13.35□□□□□ -0.27
PDPN-203ENST00000376061 ABCC4O15439 1325 aa13.35□□□□□ -0.27
PDPN-203ENST00000376061 PTPRCP08575 1304 aa13.35□□□□□ -0.27
PDPN-203ENST00000376061 MS4A1P11836 297 aa13.34□□□□□ -0.27
PDPN-203ENST00000376061 G2E3Q7L622 706 aa13.34□□□□□ -0.27
PDPN-203ENST00000376061 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
PDPN-203ENST00000376061 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
PDPN-203ENST00000376061 CLUAP1Q96AJ1 413 aa13.34□□□□□ -0.27
PDPN-203ENST00000376061 CHMP4AQ9BY43 222 aa13.34□□□□□ -0.27
PDPN-203ENST00000376061 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
PDPN-203ENST00000376061 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.27
PDPN-203ENST00000376061 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.27
PDPN-203ENST00000376061 API5Q9BZZ5 524 aaKnown RBP13.33□□□□□ -0.27
PDPN-203ENST00000376061 RREB1Q92766 1687 aa13.33□□□□□ -0.28
PDPN-203ENST00000376061 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
PDPN-203ENST00000376061 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
PDPN-203ENST00000376061 FLIIQ13045 1269 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 LY75O60449 1722 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 KCNQ2O43526 872 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 ANXA1P04083 346 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 MVPQ14764 893 aaKnown RBP13.32□□□□□ -0.28
PDPN-203ENST00000376061 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 TMEM57Q8N5G2 664 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
PDPN-203ENST00000376061 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
PDPN-203ENST00000376061 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
PDPN-203ENST00000376061 ARFGEF2Q9Y6D5 1785 aa13.31□□□□□ -0.28
PDPN-203ENST00000376061 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
PDPN-203ENST00000376061 NUP188Q5SRE5 1749 aa13.31□□□□□ -0.28
PDPN-203ENST00000376061 EVX2Q03828 476 aa13.31□□□□□ -0.28
PDPN-203ENST00000376061 PDIA6Q15084 440 aa13.31□□□□□ -0.28
PDPN-203ENST00000376061 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
PDPN-203ENST00000376061 DDX21Q9NR30 783 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDPN-203ENST00000376061 PPP4R2Q9NY27 417 aa13.31□□□□□ -0.28
PDPN-203ENST00000376061 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
PDPN-203ENST00000376061 EP400Q96L91 3159 aa13.3□□□□□ -0.28
PDPN-203ENST00000376061 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
PDPN-203ENST00000376061 PHAXQ9H814 394 aaKnown RBP13.3□□□□□ -0.28
PDPN-203ENST00000376061 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
PDPN-203ENST00000376061 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
PDPN-203ENST00000376061 KRT27Q7Z3Y8 459 aa13.29□□□□□ -0.28
PDPN-203ENST00000376061 ITPRIPQ8IWB1 547 aa13.29□□□□□ -0.28
PDPN-203ENST00000376061 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
PDPN-203ENST00000376061 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
PDPN-203ENST00000376061 ADCY9O60503 1353 aa13.28□□□□□ -0.28
PDPN-203ENST00000376061 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
PDPN-203ENST00000376061 F6X3S4 739 aa13.28□□□□□ -0.28
PDPN-203ENST00000376061 RXRBP28702 533 aa13.28□□□□□ -0.28
PDPN-203ENST00000376061 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
PDPN-203ENST00000376061 LRP10Q7Z4F1 713 aa13.28□□□□□ -0.28
PDPN-203ENST00000376061 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
PDPN-203ENST00000376061 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
PDPN-203ENST00000376061 PIP4K2AP48426 406 aaPredicted RBP13.27□□□□□ -0.29
PDPN-203ENST00000376061 NBPF14Q5TI25 921 aa13.27□□□□□ -0.29
PDPN-203ENST00000376061 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
PDPN-203ENST00000376061 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
PDPN-203ENST00000376061 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
PDPN-203ENST00000376061 DDX19BQ9UMR2 479 aa13.27□□□□□ -0.29
PDPN-203ENST00000376061 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.29
PDPN-203ENST00000376061 MYH14Q7Z406 1995 aaKnown RBP13.27□□□□□ -0.29
PDPN-203ENST00000376061 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
PDPN-203ENST00000376061 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
PDPN-203ENST00000376061 A1BGP04217 495 aa13.26□□□□□ -0.29
PDPN-203ENST00000376061 MYL6BP14649 208 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms