RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NUTM2EB1AL46 878 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-203ENST00000375315 EIF2S2P20042 333 aaKnown RBP14.72□□□□□ -0.05
C9orf3-203ENST00000375315 NUTM2AQ8IVF1 878 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-203ENST00000375315 KIAA0232Q92628 1395 aa14.71□□□□□ -0.05
C9orf3-203ENST00000375315 IL17REQ8NFR9 667 aa14.71□□□□□ -0.05
C9orf3-203ENST00000375315 VAMP4O75379 141 aa14.71□□□□□ -0.05
C9orf3-203ENST00000375315 TRIM27P14373 513 aa14.71□□□□□ -0.05
C9orf3-203ENST00000375315 ADAMTS2O95450 1211 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 BMP2KLQ5H9B9 411 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 DIAPH3Q9NSV4 1193 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 IFT57Q9NWB7 429 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 CHAF1AQ13111 956 aaPredicted RBP14.7□□□□□ -0.06
C9orf3-203ENST00000375315 TOM1L2Q6ZVM7 507 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 GPT2Q8TD30 523 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 C1orf115Q9H7X2 142 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 DDX19BQ9UMR2 479 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 EVA1CP58658 441 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 PLCD3Q8N3E9 789 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 RAPGEF4Q8WZA2 1011 aa14.7□□□□□ -0.06
C9orf3-203ENST00000375315 IGSF3O75054 1194 aa14.69□□□□□ -0.06
C9orf3-203ENST00000375315 CYP2E1P05181 493 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-203ENST00000375315 GABPB1Q06547 395 aaPredicted RBP14.69□□□□□ -0.06
C9orf3-203ENST00000375315 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
C9orf3-203ENST00000375315 CWC22Q9HCG8 908 aaKnown RBP14.69□□□□□ -0.06
C9orf3-203ENST00000375315 SPATA31A3Q5VYP0 1347 aa14.69□□□□□ -0.06
C9orf3-203ENST00000375315 STRCQ7RTU9 1775 aa14.69□□□□□ -0.06
C9orf3-203ENST00000375315 CCDC66A2RUB6 948 aa14.69□□□□□ -0.06
C9orf3-203ENST00000375315 KCNQ3O43525 872 aa14.69□□□□□ -0.06
C9orf3-203ENST00000375315 MBD3O95983 291 aa14.69□□□□□ -0.06
C9orf3-203ENST00000375315 TMEM63CQ9P1W3 806 aa14.69□□□□□ -0.06
C9orf3-203ENST00000375315 U2AF2P26368 475 aaKnown RBP eCLIP14.68□□□□□ -0.063e-8■□□□□ 10.2
C9orf3-203ENST00000375315 TEFQ10587 303 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 C1orf141Q5JVX7 400 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 SLC4A10Q6U841 1118 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 TMEM57Q8N5G2 664 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 OGFRQ9NZT2 677 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 FKBP5Q13451 457 aaPredicted RBP14.68□□□□□ -0.06
C9orf3-203ENST00000375315 TSPY26PQ9H489 355 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 ANXA1P04083 346 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 NUCB1Q02818 461 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 ARHGEF10O15013 1369 aa14.68□□□□□ -0.06
C9orf3-203ENST00000375315 IL16Q14005 1332 aa14.67□□□□□ -0.06
C9orf3-203ENST00000375315 RABEP1Q15276 862 aa14.67□□□□□ -0.06
C9orf3-203ENST00000375315 ATF7IPQ6VMQ6 1270 aa14.67□□□□□ -0.06
C9orf3-203ENST00000375315 DDX54Q8TDD1 881 aaKnown RBP14.67□□□□□ -0.06
C9orf3-203ENST00000375315 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
C9orf3-203ENST00000375315 ZBTB22O15209 634 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-203ENST00000375315 ANKRD7Q92527 254 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 ERBB3P21860 1342 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 PLEKHO1Q53GL0 409 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-203ENST00000375315 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
C9orf3-203ENST00000375315 SPTLC3Q9NUV7 552 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 KCNJ4P48050 445 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 SLC39A6Q13433 755 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 CHD1LQ86WJ1 897 aa14.66□□□□□ -0.06
C9orf3-203ENST00000375315 SYAP1Q96A49 352 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-203ENST00000375315 NWD1Q149M9 1564 aa14.65□□□□□ -0.06
C9orf3-203ENST00000375315 F6X3S4 739 aa14.65□□□□□ -0.06
C9orf3-203ENST00000375315 ZNF853P0CG23 659 aa14.65□□□□□ -0.06
C9orf3-203ENST00000375315 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-203ENST00000375315 CHL1O00533 1208 aa14.65□□□□□ -0.06
C9orf3-203ENST00000375315 SLC20A2Q08357 652 aa14.65□□□□□ -0.06
C9orf3-203ENST00000375315 TBC1D9Q6ZT07 1266 aa14.64□□□□□ -0.07
C9orf3-203ENST00000375315 G2E3Q7L622 706 aa14.64□□□□□ -0.07
C9orf3-203ENST00000375315 KAT6BQ8WYB5 2073 aa14.64□□□□□ -0.07
C9orf3-203ENST00000375315 CT47B1P0C2W7 299 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-203ENST00000375315 UVSSAQ2YD98 709 aa14.64□□□□□ -0.07
C9orf3-203ENST00000375315 PAXIP1Q6ZW49 1069 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-203ENST00000375315 FAM184AQ8NB25 1140 aa14.63□□□□□ -0.07
C9orf3-203ENST00000375315 IPO8O15397 1037 aaKnown RBP14.63□□□□□ -0.07
C9orf3-203ENST00000375315 PHF14O94880 888 aa14.63□□□□□ -0.07
C9orf3-203ENST00000375315 TATP17735 454 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-203ENST00000375315 LARP1Q6PKG0 1096 aaKnown RBP14.63□□□□□ -0.07
C9orf3-203ENST00000375315 TNS3Q68CZ2 1445 aa14.62□□□□□ -0.07
C9orf3-203ENST00000375315 PIP4K2AP48426 406 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-203ENST00000375315 TAF7Q15545 349 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-203ENST00000375315 MRPL50Q8N5N7 158 aaKnown RBP14.62□□□□□ -0.07
C9orf3-203ENST00000375315 TIGD1Q96MW7 591 aa14.62□□□□□ -0.07
C9orf3-203ENST00000375315 CCDC9Q9Y3X0 531 aaKnown RBP14.62□□□□□ -0.07
C9orf3-203ENST00000375315 BTBD11A6QL63 1104 aa14.62□□□□□ -0.07
C9orf3-203ENST00000375315 APBB1O00213 710 aa14.62□□□□□ -0.07
C9orf3-203ENST00000375315 PKP1Q13835 747 aa14.62□□□□□ -0.07
C9orf3-203ENST00000375315 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
C9orf3-203ENST00000375315 MAP3K5Q99683 1374 aa14.62□□□□□ -0.07
C9orf3-203ENST00000375315 KDRP35968 1356 aa14.61□□□□□ -0.07
C9orf3-203ENST00000375315 PRAMEF22A3QJZ6 481 aa14.61□□□□□ -0.07
C9orf3-203ENST00000375315 UBAP1LF5GYI3 381 aa14.61□□□□□ -0.07
C9orf3-203ENST00000375315 RIOK3O14730 519 aaKnown RBP14.61□□□□□ -0.07
C9orf3-203ENST00000375315 TTC12Q9H892 705 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-203ENST00000375315 AK9Q5TCS8 1911 aa14.61□□□□□ -0.07
C9orf3-203ENST00000375315 CTIFO43310 598 aaKnown RBP14.6□□□□□ -0.07
C9orf3-203ENST00000375315 CDC45O75419 566 aa14.6□□□□□ -0.07
C9orf3-203ENST00000375315 C17orf53Q8N3J3 647 aaPredicted RBP14.6□□□□□ -0.07
C9orf3-203ENST00000375315 MPNDQ8N594 471 aa14.6□□□□□ -0.07
C9orf3-203ENST00000375315 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
C9orf3-203ENST00000375315 LTN1O94822 1766 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms