RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 ZNF165P49910 485 aa24.7■■□□□ 1.55
TGFBR1-202ENST00000374994 MAP9Q49MG5 647 aa24.7■■□□□ 1.54
TGFBR1-202ENST00000374994 PHAXQ9H814 394 aaKnown RBP24.7■■□□□ 1.54
TGFBR1-202ENST00000374994 RNF123Q5XPI4 1314 aa24.7■■□□□ 1.54
TGFBR1-202ENST00000374994 KRT18P05783 430 aaKnown RBP24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 CKAP2LQ8IYA6 745 aa24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 CCDC196A0A1B0GTZ2 297 aa24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 BICRAQ9NZM4 1560 aa24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 GOLGA6L7A0A1B0GV03 622 aa24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 SDSP20132 328 aa24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 BOLA2Q9H3K6 86 aa24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 WASLO00401 505 aaPredicted RBP24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 C16orf45Q96MC5 204 aaPredicted RBP24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 RBM27Q9P2N5 1060 aaKnown RBP24.69■■□□□ 1.54
TGFBR1-202ENST00000374994 CCDC171Q6TFL3 1326 aa24.68■■□□□ 1.54
TGFBR1-202ENST00000374994 URI1O94763 535 aaPredicted RBP24.68■■□□□ 1.54
TGFBR1-202ENST00000374994 ZSCAN16Q9H4T2 348 aaPredicted RBP24.68■■□□□ 1.54
TGFBR1-202ENST00000374994 CRACR2AQ9BSW2 395 aa24.68■■□□□ 1.54
TGFBR1-202ENST00000374994 TDO2P48775 406 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 SOGA3Q5TF21 947 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 CCDC150Q8NCX0 1101 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 CASQ1P31415 396 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 GDPD2Q9HCC8 539 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 TUBB4AP04350 444 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 RBM42Q9BTD8 480 aaKnown RBP24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 PIK3R4Q99570 1358 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 BMP2KQ9NSY1 1161 aaPredicted RBP24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 ADGRL1O94910 1474 aa24.67■■□□□ 1.54
TGFBR1-202ENST00000374994 RAPGEF3O95398 923 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 HYPKQ9NX55 129 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 ERICH4A6NGS2 130 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 FSIP1Q8NA03 581 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 MPHOSPH8Q99549 860 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 EIF5P55010 431 aaKnown RBP24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 SYCP1Q15431 976 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 AIDAQ96BJ3 306 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 PPP4R3BQ5MIZ7 849 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 FAM200AQ8TCP9 573 aa24.66■■□□□ 1.54
TGFBR1-202ENST00000374994 NOLC1Q14978 699 aaKnown RBP eCLIP24.65■■□□□ 1.54
TGFBR1-202ENST00000374994 PANK2Q9BZ23 570 aa24.65■■□□□ 1.54
TGFBR1-202ENST00000374994 BMS1Q14692 1282 aaKnown RBP24.65■■□□□ 1.54
TGFBR1-202ENST00000374994 KIAA1328Q86T90 577 aa24.65■■□□□ 1.54
TGFBR1-202ENST00000374994 ZNF397Q8NF99 534 aaPredicted RBP24.65■■□□□ 1.54
TGFBR1-202ENST00000374994 HCLS1P14317 486 aaPredicted RBP24.64■■□□□ 1.54
TGFBR1-202ENST00000374994 PDE1AP54750 535 aa24.64■■□□□ 1.54
TGFBR1-202ENST00000374994 PROSER2Q86WR7 435 aaPredicted RBP24.64■■□□□ 1.54
TGFBR1-202ENST00000374994 TESK2Q96S53 571 aa24.64■■□□□ 1.54
TGFBR1-202ENST00000374994 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.54
TGFBR1-202ENST00000374994 EIF2AK4Q9P2K8 1649 aaKnown RBP24.64■■□□□ 1.53
TGFBR1-202ENST00000374994 JAKMIP3Q5VZ66 844 aa24.64■■□□□ 1.53
TGFBR1-202ENST00000374994 MRPL50Q8N5N7 158 aaKnown RBP24.63■■□□□ 1.53
TGFBR1-202ENST00000374994 ESYT1Q9BSJ8 1104 aa24.63■■□□□ 1.53
TGFBR1-202ENST00000374994 MTMR7Q9Y216 660 aa24.63■■□□□ 1.53
TGFBR1-202ENST00000374994 TANGO6Q9C0B7 1094 aa24.63■■□□□ 1.53
TGFBR1-202ENST00000374994 IFIT1P09914 478 aaKnown RBP24.63■■□□□ 1.53
TGFBR1-202ENST00000374994 KIF4BQ2VIQ3 1234 aa24.62■■□□□ 1.53
TGFBR1-202ENST00000374994 SNW1Q13573 536 aaKnown RBP24.62■■□□□ 1.53
TGFBR1-202ENST00000374994 INTS4Q96HW7 963 aaKnown RBP24.61■■□□□ 1.53
TGFBR1-202ENST00000374994 NPC1L1Q9UHC9 1359 aa24.61■■□□□ 1.53
TGFBR1-202ENST00000374994 TAF4BQ92750 862 aa24.61■■□□□ 1.53
TGFBR1-202ENST00000374994 FAM107BQ9H098 131 aa24.61■■□□□ 1.53
TGFBR1-202ENST00000374994 PRDM10Q9NQV6 1147 aa24.61■■□□□ 1.53
TGFBR1-202ENST00000374994 CEP135Q66GS9 1140 aa24.61■■□□□ 1.53
TGFBR1-202ENST00000374994 DCTPP1Q9H773 170 aa24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 KDM2BQ8NHM5 1336 aa24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 SHTN1A0MZ66 631 aa24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 IDH1O75874 414 aaKnown RBP24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 PPP1R42Q7Z4L9 355 aa24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 PER1O15534 1290 aaPredicted RBP24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 CCDC8Q9H0W5 538 aaPredicted RBP24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 ZBTB40Q9NUA8 1239 aa24.6■■□□□ 1.53
TGFBR1-202ENST00000374994 RHPN1Q8TCX5 695 aa24.59■■□□□ 1.53
TGFBR1-202ENST00000374994 SPA17Q15506 151 aa24.59■■□□□ 1.53
TGFBR1-202ENST00000374994 ZFYVE27Q5T4F4 411 aa24.59■■□□□ 1.53
TGFBR1-202ENST00000374994 SLC26A8Q96RN1 970 aa24.59■■□□□ 1.53
TGFBR1-202ENST00000374994 RBM25P49756 843 aaKnown RBP24.59■■□□□ 1.53
TGFBR1-202ENST00000374994 NEK1Q96PY6 1258 aa24.59■■□□□ 1.53
TGFBR1-202ENST00000374994 TFIP11Q9UBB9 837 aaKnown RBP24.58■■□□□ 1.53
TGFBR1-202ENST00000374994 CNNM3Q8NE01 707 aa24.58■■□□□ 1.53
TGFBR1-202ENST00000374994 USP48Q86UV5 1035 aa24.58■■□□□ 1.53
TGFBR1-202ENST00000374994 TMC6Q7Z403 805 aa24.58■■□□□ 1.52
TGFBR1-202ENST00000374994 PRM3Q9NNZ6 103 aa24.58■■□□□ 1.52
TGFBR1-202ENST00000374994 UHRF1BP1Q6BDS2 1440 aa24.57■■□□□ 1.52
TGFBR1-202ENST00000374994 DUOX2Q9NRD8 1548 aa24.57■■□□□ 1.52
TGFBR1-202ENST00000374994 TRMT1Q9NXH9 659 aaKnown RBP24.57■■□□□ 1.52
TGFBR1-202ENST00000374994 IDI1Q13907 227 aa24.57■■□□□ 1.52
TGFBR1-202ENST00000374994 KRT222Q8N1A0 295 aa24.57■■□□□ 1.52
TGFBR1-202ENST00000374994 F13A1P00488 732 aa24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 FAM193AP78312 1265 aa24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 IKQ13123 557 aaPredicted RBP24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 FKBP15Q5T1M5 1219 aa24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 KANK3Q6NY19 840 aa24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 GIMAP6Q6P9H5 292 aa24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 DDX54Q8TDD1 881 aaKnown RBP24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 PYM1Q9BRP8 204 aaKnown RBP24.56■■□□□ 1.52
TGFBR1-202ENST00000374994 ZNF213O14771 459 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 YEATS4O95619 227 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 ATP8B2P98198 1209 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 MYD88Q99836 296 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms