RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 NUP133Q8WUM0 1156 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 PPFIBP1Q86W92 1011 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 LRP2BPQ9P2M1 347 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 MTMR7Q9Y216 660 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 CDK5RAP3Q96JB5 506 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 MPNDQ8N594 471 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 HMG20BQ9P0W2 317 aa22.93■■□□□ 1.26
TGFBR1-201ENST00000374990 EIF4A2Q14240 407 aaKnown RBP22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 FILIP1Q7Z7B0 1213 aa22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 MAP3K2Q9Y2U5 619 aa22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 RIMS2Q9UQ26 1411 aa22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 CTAGE5O15320 804 aa22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 IFIT5Q13325 482 aaKnown RBP22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 AK7Q96M32 723 aa22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 DDX19AQ9NUU7 478 aaKnown RBP22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 ZNHIT6Q9NWK9 470 aaKnown RBP22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 STX6O43752 255 aa22.92■■□□□ 1.26
TGFBR1-201ENST00000374990 EPS15P42566 896 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 PDE4CQ08493 712 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 NPATQ14207 1427 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 CCDC196A0A1B0GTZ2 297 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 ANO10Q9NW15 660 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 ALDH1L1O75891 902 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 CDR1P51861 262 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 ATP8B2P98198 1209 aa22.91■■□□□ 1.26
TGFBR1-201ENST00000374990 KIF2AO00139 706 aaPredicted RBP22.9■■□□□ 1.26
TGFBR1-201ENST00000374990 A0A1W2PP64 1363 aa22.9■■□□□ 1.26
TGFBR1-201ENST00000374990 MCM5P33992 734 aa22.89■■□□□ 1.26
TGFBR1-201ENST00000374990 CCAR1Q8IX12 1150 aaKnown RBP22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 TMX3Q96JJ7 454 aa22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 RAI14Q9P0K7 980 aa22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 SOS1Q07889 1333 aaPredicted RBP22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 FLT4P35916 1363 aa22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 C8orf76Q96K31 380 aa22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 CCDC85AQ96PX6 553 aaPredicted RBP22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 CEP131Q9UPN4 1083 aa22.89■■□□□ 1.25
TGFBR1-201ENST00000374990 CAVIN2O95810 425 aa22.88■■□□□ 1.25
TGFBR1-201ENST00000374990 BRPF1P55201 1214 aaPredicted RBP22.88■■□□□ 1.25
TGFBR1-201ENST00000374990 ABCC2Q92887 1545 aa22.88■■□□□ 1.25
TGFBR1-201ENST00000374990 KRT28Q7Z3Y7 464 aa22.88■■□□□ 1.25
TGFBR1-201ENST00000374990 TEX13AQ9BXU3 409 aaPredicted RBP22.88■■□□□ 1.25
TGFBR1-201ENST00000374990 SPINK5Q9NQ38 1064 aaPredicted RBP22.88■■□□□ 1.25
TGFBR1-201ENST00000374990 SPATA31E1Q6ZUB1 1445 aa22.88■■□□□ 1.25
TGFBR1-201ENST00000374990 UQCRHLA0A096LP55 91 aa22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 UQCRHP07919 91 aa22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 SETQ01105 290 aaPredicted RBP22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 RRP9O43818 475 aaKnown RBP22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 SNRPA1P09661 255 aaKnown RBP22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 ESYT1Q9BSJ8 1104 aa22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 CAGE1Q8TC20 777 aa22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 SOGA3Q5TF21 947 aa22.87■■□□□ 1.25
TGFBR1-201ENST00000374990 IKQ13123 557 aaPredicted RBP22.86■■□□□ 1.25
TGFBR1-201ENST00000374990 UBE2HP62256 183 aa22.86■■□□□ 1.25
TGFBR1-201ENST00000374990 MAP3K12Q12852 859 aa22.86■■□□□ 1.25
TGFBR1-201ENST00000374990 TNNQ9UQP3 1299 aa22.86■■□□□ 1.25
TGFBR1-201ENST00000374990 ZNF652Q9Y2D9 606 aa22.86■■□□□ 1.25
TGFBR1-201ENST00000374990 NAPBQ9H115 298 aa22.86■■□□□ 1.25
TGFBR1-201ENST00000374990 LUC7LQ9NQ29 371 aaKnown RBP22.86■■□□□ 1.25
TGFBR1-201ENST00000374990 ANKRD24Q8TF21 1146 aa22.85■■□□□ 1.25
TGFBR1-201ENST00000374990 UBE3BQ7Z3V4 1068 aa22.85■■□□□ 1.25
TGFBR1-201ENST00000374990 PHACTR3Q96KR7 559 aa22.85■■□□□ 1.25
TGFBR1-201ENST00000374990 ZNF213O14771 459 aa22.85■■□□□ 1.25
TGFBR1-201ENST00000374990 RBM10P98175 930 aaKnown RBP22.85■■□□□ 1.25
TGFBR1-201ENST00000374990 ANKRD13DQ6ZTN6 518 aa22.85■■□□□ 1.25
TGFBR1-201ENST00000374990 UVSSAQ2YD98 709 aa22.84■■□□□ 1.25
TGFBR1-201ENST00000374990 TSPYL6Q8N831 410 aa22.84■■□□□ 1.25
TGFBR1-201ENST00000374990 ABCF2Q9UG63 623 aa22.84■■□□□ 1.25
TGFBR1-201ENST00000374990 SFPQP23246 707 aaKnown RBP eCLIP22.84■■□□□ 1.25
TGFBR1-201ENST00000374990 CAMK4Q16566 473 aa22.84■■□□□ 1.25
TGFBR1-201ENST00000374990 EIF4G3O43432 1585 aaKnown RBP22.83■■□□□ 1.25
TGFBR1-201ENST00000374990 GJB2P29033 226 aa22.83■■□□□ 1.25
TGFBR1-201ENST00000374990 CEP85Q6P2H3 762 aa22.83■■□□□ 1.25
TGFBR1-201ENST00000374990 YTHDC2Q9H6S0 1430 aaKnown RBP22.83■■□□□ 1.25
TGFBR1-201ENST00000374990 ZMYM4Q5VZL5 1548 aa22.83■■□□□ 1.24
TGFBR1-201ENST00000374990 TTLL5Q6EMB2 1281 aa22.83■■□□□ 1.24
TGFBR1-201ENST00000374990 CWC25Q9NXE8 425 aaPredicted RBP22.83■■□□□ 1.24
TGFBR1-201ENST00000374990 TSHZ3Q63HK5 1081 aa22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 CADPS2Q86UW7 1296 aa22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 TXLNBQ8N3L3 684 aa22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 AKAP4Q5JQC9 854 aa22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 KSR2Q6VAB6 950 aa22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 HMGB2P26583 209 aaKnown RBP22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 RNF41Q9H4P4 317 aaPredicted RBP22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 CFAP100Q494V2 611 aa22.82■■□□□ 1.24
TGFBR1-201ENST00000374990 PDCL2Q8N4E4 241 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 LINS1Q8NG48 757 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 ANKRD18BA2A2Z9 1011 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 MTHFSDQ2M296 383 aaKnown RBP22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 USP25Q9UHP3 1055 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 ABCC1P33527 1531 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 CCDC66A2RUB6 948 aa22.81■■□□□ 1.24
TGFBR1-201ENST00000374990 KDM2BQ8NHM5 1336 aa22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 BLMP54132 1417 aaPredicted RBP22.8■■□□□ 1.24
TGFBR1-201ENST00000374990 NEMFO60524 1076 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms