RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TNRC6CQ9HCJ0 1690 aaKnown RBP14.51□□□□□ -0.09
HLA-DQA1-202ENST00000374949 NFATC2IPQ8NCF5 419 aa14.5□□□□□ -0.09
HLA-DQA1-202ENST00000374949 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
HLA-DQA1-202ENST00000374949 SBF1O95248 1867 aa14.5□□□□□ -0.09
HLA-DQA1-202ENST00000374949 AFDNP55196 1824 aaKnown RBP14.5□□□□□ -0.09
HLA-DQA1-202ENST00000374949 MRC1P22897 1456 aa14.5□□□□□ -0.09
HLA-DQA1-202ENST00000374949 CHRNA5P30532 468 aa14.49□□□□□ -0.09
HLA-DQA1-202ENST00000374949 SULT6B1Q6IMI4 303 aa14.49□□□□□ -0.09
HLA-DQA1-202ENST00000374949 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
HLA-DQA1-202ENST00000374949 DLEC1Q9Y238 1755 aa14.49□□□□□ -0.09
HLA-DQA1-202ENST00000374949 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
HLA-DQA1-202ENST00000374949 DALRD3Q5D0E6 543 aaKnown RBP14.48□□□□□ -0.09
HLA-DQA1-202ENST00000374949 RNF181Q9P0P0 153 aa14.48□□□□□ -0.09
HLA-DQA1-202ENST00000374949 TIAM2Q8IVF5 1701 aa14.47□□□□□ -0.09
HLA-DQA1-202ENST00000374949 NRXN2Q9P2S2 1712 aa14.47□□□□□ -0.09
HLA-DQA1-202ENST00000374949 POLRMTO00411 1230 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-202ENST00000374949 HTRA3P83110 453 aa14.47□□□□□ -0.09
HLA-DQA1-202ENST00000374949 INTS5Q6P9B9 1019 aaKnown RBP14.47□□□□□ -0.09
HLA-DQA1-202ENST00000374949 DNAJC10Q8IXB1 793 aa14.47□□□□□ -0.09
HLA-DQA1-202ENST00000374949 HNRNPUQ00839 825 aaKnown RBP eCLIP14.46□□□□□ -0.09
HLA-DQA1-202ENST00000374949 USPL1Q5W0Q7 1092 aa14.46□□□□□ -0.09
HLA-DQA1-202ENST00000374949 C16orf71Q8IYS4 520 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQA1-202ENST00000374949 DNAJC5GQ8N7S2 189 aa14.46□□□□□ -0.09
HLA-DQA1-202ENST00000374949 RBM46Q8TBY0 533 aaKnown RBP14.46□□□□□ -0.09
HLA-DQA1-202ENST00000374949 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQA1-202ENST00000374949 UBR2Q8IWV8 1755 aa14.45□□□□□ -0.1
HLA-DQA1-202ENST00000374949 IL13P35225 146 aa14.45□□□□□ -0.1
HLA-DQA1-202ENST00000374949 ADAMTS8Q9UP79 889 aa14.45□□□□□ -0.1
HLA-DQA1-202ENST00000374949 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
HLA-DQA1-202ENST00000374949 RASSF7Q02833 373 aa14.44□□□□□ -0.1
HLA-DQA1-202ENST00000374949 SLC52A2Q9HAB3 445 aa14.44□□□□□ -0.1
HLA-DQA1-202ENST00000374949 COL15A1P39059 1388 aa14.44□□□□□ -0.1
HLA-DQA1-202ENST00000374949 ZPR1O75312 459 aa14.43□□□□□ -0.1
HLA-DQA1-202ENST00000374949 TM4SF1P30408 202 aa14.43□□□□□ -0.1
HLA-DQA1-202ENST00000374949 SLC39A6Q13433 755 aa14.43□□□□□ -0.1
HLA-DQA1-202ENST00000374949 AKAP4Q5JQC9 854 aa14.43□□□□□ -0.1
HLA-DQA1-202ENST00000374949 CARMIL3Q8ND23 1372 aa14.43□□□□□ -0.1
HLA-DQA1-202ENST00000374949 CYP19A1P11511 503 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQA1-202ENST00000374949 RRAGCQ9HB90 399 aa14.42□□□□□ -0.1
HLA-DQA1-202ENST00000374949 LGR6Q9HBX8 967 aa14.42□□□□□ -0.1
HLA-DQA1-202ENST00000374949 NUDCQ9Y266 331 aa14.42□□□□□ -0.1
HLA-DQA1-202ENST00000374949 SCN7AQ01118 1682 aa14.42□□□□□ -0.1
HLA-DQA1-202ENST00000374949 CCDC88AQ3V6T2 1871 aa14.42□□□□□ -0.1
HLA-DQA1-202ENST00000374949 COL11A2P13942 1736 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQA1-202ENST00000374949 HMOX1P09601 288 aa14.41□□□□□ -0.1
HLA-DQA1-202ENST00000374949 FSTL1Q12841 308 aa14.41□□□□□ -0.1
HLA-DQA1-202ENST00000374949 NFIXQ14938 502 aa14.41□□□□□ -0.1
HLA-DQA1-202ENST00000374949 ZBTB1Q9Y2K1 713 aa14.41□□□□□ -0.1
HLA-DQA1-202ENST00000374949 ANKRD31Q8N7Z5 1873 aa14.41□□□□□ -0.1
HLA-DQA1-202ENST00000374949 RNMTO43148 476 aaKnown RBP14.4□□□□□ -0.1
HLA-DQA1-202ENST00000374949 DIAPH1O60610 1272 aaKnown RBP14.4□□□□□ -0.1
HLA-DQA1-202ENST00000374949 KLRG1Q96E93 195 aa14.4□□□□□ -0.1
HLA-DQA1-202ENST00000374949 NARFQ9UHQ1 456 aa14.4□□□□□ -0.1
HLA-DQA1-202ENST00000374949 PRELPP51888 382 aa14.39□□□□□ -0.11
HLA-DQA1-202ENST00000374949 BCL2L12Q9HB09 334 aa14.39□□□□□ -0.11
HLA-DQA1-202ENST00000374949 SIPA1L3O60292 1781 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 SERPINB2P05120 415 aa14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 CANXP27824 592 aaKnown RBP14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 MTHFSDQ2M296 383 aaKnown RBP14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 SMC1BQ8NDV3 1235 aa14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 CACNA1SQ13698 1873 aa14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 ZBED9Q6R2W3 1325 aa14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 ZC3H4Q9UPT8 1303 aaKnown RBP14.37□□□□□ -0.11
HLA-DQA1-202ENST00000374949 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQA1-202ENST00000374949 LMNB1P20700 586 aa14.36□□□□□ -0.11
HLA-DQA1-202ENST00000374949 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
HLA-DQA1-202ENST00000374949 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
HLA-DQA1-202ENST00000374949 C2CD5Q86YS7 1000 aa14.36□□□□□ -0.11
HLA-DQA1-202ENST00000374949 JMYQ8N9B5 988 aa14.36□□□□□ -0.11
HLA-DQA1-202ENST00000374949 COL3A1P02461 1466 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQA1-202ENST00000374949 NFKBIEO00221 500 aa14.35□□□□□ -0.11
HLA-DQA1-202ENST00000374949 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
HLA-DQA1-202ENST00000374949 COL13A1Q5TAT6 717 aaPredicted RBP14.35□□□□□ -0.11
HLA-DQA1-202ENST00000374949 TTLL6Q8N841 843 aa14.35□□□□□ -0.11
HLA-DQA1-202ENST00000374949 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
HLA-DQA1-202ENST00000374949 BCORQ6W2J9 1755 aa14.34□□□□□ -0.11
HLA-DQA1-202ENST00000374949 FER1L6Q2WGJ9 1857 aa14.34□□□□□ -0.11
HLA-DQA1-202ENST00000374949 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
HLA-DQA1-202ENST00000374949 DICER1Q9UPY3 1922 aaKnown RBP14.34□□□□□ -0.11
HLA-DQA1-202ENST00000374949 GLTPD2A6NH11 291 aa14.33□□□□□ -0.12
HLA-DQA1-202ENST00000374949 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
HLA-DQA1-202ENST00000374949 TTC5Q8N0Z6 440 aa14.33□□□□□ -0.12
HLA-DQA1-202ENST00000374949 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
HLA-DQA1-202ENST00000374949 ZNF330Q9Y3S2 320 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQA1-202ENST00000374949 H0YIN7 160 aa14.32□□□□□ -0.12
HLA-DQA1-202ENST00000374949 EIF5P55010 431 aaKnown RBP14.32□□□□□ -0.12
HLA-DQA1-202ENST00000374949 TBC1D9BQ66K14 1250 aa14.32□□□□□ -0.12
HLA-DQA1-202ENST00000374949 CCDC24Q8N4L8 307 aa14.32□□□□□ -0.12
HLA-DQA1-202ENST00000374949 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
HLA-DQA1-202ENST00000374949 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQA1-202ENST00000374949 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
HLA-DQA1-202ENST00000374949 CAPN15O75808 1086 aa14.31□□□□□ -0.12
HLA-DQA1-202ENST00000374949 STARD3NLO95772 234 aa14.31□□□□□ -0.12
HLA-DQA1-202ENST00000374949 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQA1-202ENST00000374949 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQA1-202ENST00000374949 HEG1Q9ULI3 1381 aa14.31□□□□□ -0.12
HLA-DQA1-202ENST00000374949 A0A087WZG4 1122 aa14.3□□□□□ -0.12
HLA-DQA1-202ENST00000374949 APAF1O14727 1248 aa14.3□□□□□ -0.12
HLA-DQA1-202ENST00000374949 PRR5LQ6MZQ0 368 aa14.3□□□□□ -0.12
HLA-DQA1-202ENST00000374949 ZNF622Q969S3 477 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms