RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 CHL1O00533 1208 aa22.68■■□□□ 1.22
PFDN6-201ENST00000374606 FLAD1Q8NFF5 587 aa22.68■■□□□ 1.22
PFDN6-201ENST00000374606 GPBP1L1Q9HC44 474 aaPredicted RBP22.68■■□□□ 1.22
PFDN6-201ENST00000374606 BABAM1Q9NWV8 329 aa22.68■■□□□ 1.22
PFDN6-201ENST00000374606 ITGB4P16144 1822 aa22.67■■□□□ 1.22
PFDN6-201ENST00000374606 ERVV-2B6SEH9 535 aa22.67■■□□□ 1.22
PFDN6-201ENST00000374606 CABP4P57796 275 aa22.67■■□□□ 1.22
PFDN6-201ENST00000374606 TAF1LQ8IZX4 1826 aa22.65■■□□□ 1.22
PFDN6-201ENST00000374606 ADCY9O60503 1353 aa22.64■■□□□ 1.22
PFDN6-201ENST00000374606 PALLDQ8WX93 1383 aa22.64■■□□□ 1.22
PFDN6-201ENST00000374606 BTBD11A6QL63 1104 aa22.64■■□□□ 1.21
PFDN6-201ENST00000374606 MIS18AQ9NYP9 233 aa22.64■■□□□ 1.21
PFDN6-201ENST00000374606 NFATC2IPQ8NCF5 419 aa22.63■■□□□ 1.21
PFDN6-201ENST00000374606 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
PFDN6-201ENST00000374606 TMOD3Q9NYL9 352 aa22.62■■□□□ 1.21
PFDN6-201ENST00000374606 HSPA6P17066 643 aa22.61■■□□□ 1.21
PFDN6-201ENST00000374606 C4BP0C0L5 1744 aa22.6■■□□□ 1.21
PFDN6-201ENST00000374606 UBR2Q8IWV8 1755 aa22.59■■□□□ 1.21
PFDN6-201ENST00000374606 ZNF526Q8TF50 670 aaPredicted RBP22.59■■□□□ 1.21
PFDN6-201ENST00000374606 AK7Q96M32 723 aa22.59■■□□□ 1.21
PFDN6-201ENST00000374606 CT47B1P0C2W7 299 aaPredicted RBP22.58■■□□□ 1.21
PFDN6-201ENST00000374606 SMARCC1Q92922 1105 aaPredicted RBP22.58■■□□□ 1.21
PFDN6-201ENST00000374606 TTC5Q8N0Z6 440 aa22.57■■□□□ 1.2
PFDN6-201ENST00000374606 UBR3Q6ZT12 1888 aa22.56■■□□□ 1.2
PFDN6-201ENST00000374606 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
PFDN6-201ENST00000374606 RCAN3Q9UKA8 241 aa22.56■■□□□ 1.2
PFDN6-201ENST00000374606 KCNQ3O43525 872 aa22.55■■□□□ 1.2
PFDN6-201ENST00000374606 EIF4A1P60842 406 aaKnown RBP22.55■■□□□ 1.2
PFDN6-201ENST00000374606 SLC39A6Q13433 755 aa22.55■■□□□ 1.2
PFDN6-201ENST00000374606 TWISTNBQ3B726 338 aaPredicted RBP22.55■■□□□ 1.2
PFDN6-201ENST00000374606 C8orf58Q8NAV2 365 aa22.55■■□□□ 1.2
PFDN6-201ENST00000374606 PIGBQ92521 554 aa22.55■■□□□ 1.2
PFDN6-201ENST00000374606 PHF14O94880 888 aa22.54■■□□□ 1.2
PFDN6-201ENST00000374606 KRT24Q2M2I5 525 aa22.54■■□□□ 1.2
PFDN6-201ENST00000374606 KCPQ6ZWJ8 1503 aa22.53■■□□□ 1.2
PFDN6-201ENST00000374606 ELL2O00472 640 aaPredicted RBP22.53■■□□□ 1.2
PFDN6-201ENST00000374606 AMIGO3Q86WK7 504 aa22.53■■□□□ 1.2
PFDN6-201ENST00000374606 TSPYL6Q8N831 410 aa22.53■■□□□ 1.2
PFDN6-201ENST00000374606 SOS1Q07889 1333 aaPredicted RBP22.53■■□□□ 1.2
PFDN6-201ENST00000374606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.52■■□□□ 1.2
PFDN6-201ENST00000374606 WWC3Q9ULE0 1092 aa22.52■■□□□ 1.2
PFDN6-201ENST00000374606 LAMB4A4D0S4 1761 aa22.52■■□□□ 1.2
PFDN6-201ENST00000374606 SSFA2P28290 1259 aa22.51■■□□□ 1.19
PFDN6-201ENST00000374606 ZNF428Q96B54 188 aa22.51■■□□□ 1.19
PFDN6-201ENST00000374606 FMNL2Q96PY5 1086 aa22.51■■□□□ 1.19
PFDN6-201ENST00000374606 HOXB7P09629 217 aa22.5■■□□□ 1.19
PFDN6-201ENST00000374606 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
PFDN6-201ENST00000374606 VAMP4O75379 141 aa22.49■■□□□ 1.19
PFDN6-201ENST00000374606 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
PFDN6-201ENST00000374606 CICQ96RK0 1608 aaPredicted RBP22.49■■□□□ 1.19
PFDN6-201ENST00000374606 ATG3Q9NT62 314 aa22.48■■□□□ 1.19
PFDN6-201ENST00000374606 ASAP1Q9ULH1 1129 aa22.48■■□□□ 1.19
PFDN6-201ENST00000374606 KIF3CO14782 793 aa22.47■■□□□ 1.19
PFDN6-201ENST00000374606 RARSP54136 660 aaKnown RBP22.47■■□□□ 1.19
PFDN6-201ENST00000374606 SMIM5Q71RC9 77 aa22.47■■□□□ 1.19
PFDN6-201ENST00000374606 LOC102724428A0A0B4J2F2 783 aa22.46■■□□□ 1.19
PFDN6-201ENST00000374606 SIK1P57059 783 aa22.46■■□□□ 1.19
PFDN6-201ENST00000374606 ALDH1L2Q3SY69 923 aa22.46■■□□□ 1.19
PFDN6-201ENST00000374606 LINC00116Q8NCU8 138 aa22.46■■□□□ 1.19
PFDN6-201ENST00000374606 PTCD1O75127 700 aaKnown RBP22.45■■□□□ 1.18
PFDN6-201ENST00000374606 CHMP4AQ9BY43 222 aa22.45■■□□□ 1.18
PFDN6-201ENST00000374606 SMC4Q9NTJ3 1288 aa22.45■■□□□ 1.18
PFDN6-201ENST00000374606 SUPT16HQ9Y5B9 1047 aaKnown RBP22.45■■□□□ 1.18
PFDN6-201ENST00000374606 GNPATO15228 680 aa22.44■■□□□ 1.18
PFDN6-201ENST00000374606 SNRPA1P09661 255 aaKnown RBP22.44■■□□□ 1.18
PFDN6-201ENST00000374606 HDGFL1Q5TGJ6 251 aa22.44■■□□□ 1.18
PFDN6-201ENST00000374606 SSH1Q8WYL5 1049 aa22.44■■□□□ 1.18
PFDN6-201ENST00000374606 BCL2L13Q9BXK5 485 aa22.44■■□□□ 1.18
PFDN6-201ENST00000374606 CCDC30Q5VVM6 783 aa22.43■■□□□ 1.18
PFDN6-201ENST00000374606 RBM42Q9BTD8 480 aaKnown RBP22.43■■□□□ 1.18
PFDN6-201ENST00000374606 TJP1Q07157 1748 aa22.43■■□□□ 1.18
PFDN6-201ENST00000374606 APLP1P51693 650 aa22.42■■□□□ 1.18
PFDN6-201ENST00000374606 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
PFDN6-201ENST00000374606 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
PFDN6-201ENST00000374606 KIF13BQ9NQT8 1826 aa22.41■■□□□ 1.18
PFDN6-201ENST00000374606 PRAMEF22A3QJZ6 481 aa22.41■■□□□ 1.18
PFDN6-201ENST00000374606 BCAR3O75815 825 aa22.41■■□□□ 1.18
PFDN6-201ENST00000374606 MMP10P09238 476 aa22.41■■□□□ 1.18
PFDN6-201ENST00000374606 EIF2S2P20042 333 aaKnown RBP22.41■■□□□ 1.18
PFDN6-201ENST00000374606 ZNF831Q5JPB2 1677 aa22.41■■□□□ 1.18
PFDN6-201ENST00000374606 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
PFDN6-201ENST00000374606 TCERG1O14776 1098 aaKnown RBP22.4■■□□□ 1.18
PFDN6-201ENST00000374606 ATP6V1AP38606 617 aa22.4■■□□□ 1.18
PFDN6-201ENST00000374606 RRP1P56182 461 aaKnown RBP22.4■■□□□ 1.18
PFDN6-201ENST00000374606 ITPK1Q13572 414 aa22.4■■□□□ 1.18
PFDN6-201ENST00000374606 VSIG10Q8N0Z9 540 aa22.4■■□□□ 1.18
PFDN6-201ENST00000374606 NECTIN2Q92692 538 aa22.4■■□□□ 1.18
PFDN6-201ENST00000374606 CACNA1FO60840 1977 aa22.39■■□□□ 1.18
PFDN6-201ENST00000374606 RNF123Q5XPI4 1314 aa22.39■■□□□ 1.18
PFDN6-201ENST00000374606 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
PFDN6-201ENST00000374606 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.39■■□□□ 1.17
PFDN6-201ENST00000374606 KIAA1551Q9HCM1 1747 aa22.39■■□□□ 1.17
PFDN6-201ENST00000374606 MRPL50Q8N5N7 158 aaKnown RBP22.38■■□□□ 1.17
PFDN6-201ENST00000374606 TOMM70O94826 608 aa22.37■■□□□ 1.17
PFDN6-201ENST00000374606 TGFB2P61812 414 aa22.37■■□□□ 1.17
PFDN6-201ENST00000374606 TEX13AQ9BXU3 409 aaPredicted RBP22.37■■□□□ 1.17
PFDN6-201ENST00000374606 N4BP2Q86UW6 1770 aaPredicted RBP22.37■■□□□ 1.17
PFDN6-201ENST00000374606 BRPF1P55201 1214 aaPredicted RBP22.36■■□□□ 1.17
PFDN6-201ENST00000374606 FRAT1Q92837 279 aaPredicted RBP22.36■■□□□ 1.17
PFDN6-201ENST00000374606 CHPF2Q9P2E5 772 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms