RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
PDZD11-202ENST00000374454 STK32BQ9NY57 414 aa12.84□□□□□ -0.35
PDZD11-202ENST00000374454 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
PDZD11-202ENST00000374454 RREB1Q92766 1687 aa12.83□□□□□ -0.35
PDZD11-202ENST00000374454 VAMP4O75379 141 aa12.83□□□□□ -0.36
PDZD11-202ENST00000374454 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
PDZD11-202ENST00000374454 SLC15A2Q16348 729 aa12.83□□□□□ -0.36
PDZD11-202ENST00000374454 TWISTNBQ3B726 338 aaPredicted RBP12.83□□□□□ -0.36
PDZD11-202ENST00000374454 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
PDZD11-202ENST00000374454 ELL2O00472 640 aaPredicted RBP12.82□□□□□ -0.36
PDZD11-202ENST00000374454 A1BGP04217 495 aa12.82□□□□□ -0.36
PDZD11-202ENST00000374454 CT47B1P0C2W7 299 aaPredicted RBP12.82□□□□□ -0.36
PDZD11-202ENST00000374454 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
PDZD11-202ENST00000374454 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
PDZD11-202ENST00000374454 AK7Q96M32 723 aa12.82□□□□□ -0.36
PDZD11-202ENST00000374454 ANO8Q9HCE9 1232 aaPredicted RBP12.82□□□□□ -0.36
PDZD11-202ENST00000374454 C5P01031 1676 aa12.82□□□□□ -0.36
PDZD11-202ENST00000374454 TJP1Q07157 1748 aa12.82□□□□□ -0.36
PDZD11-202ENST00000374454 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
PDZD11-202ENST00000374454 ADRA2BP18089 450 aa12.81□□□□□ -0.36
PDZD11-202ENST00000374454 EIF2S2P20042 333 aaKnown RBP12.81□□□□□ -0.36
PDZD11-202ENST00000374454 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
PDZD11-202ENST00000374454 EIF5P55010 431 aaKnown RBP12.81□□□□□ -0.36
PDZD11-202ENST00000374454 CCDC30Q5VVM6 783 aa12.81□□□□□ -0.36
PDZD11-202ENST00000374454 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
PDZD11-202ENST00000374454 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
PDZD11-202ENST00000374454 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
PDZD11-202ENST00000374454 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
PDZD11-202ENST00000374454 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
PDZD11-202ENST00000374454 ZBTB1Q9Y2K1 713 aa12.81□□□□□ -0.36
PDZD11-202ENST00000374454 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
PDZD11-202ENST00000374454 C4BP0C0L5 1744 aa12.8□□□□□ -0.36
PDZD11-202ENST00000374454 NUP188Q5SRE5 1749 aa12.8□□□□□ -0.36
PDZD11-202ENST00000374454 GNPATO15228 680 aa12.8□□□□□ -0.36
PDZD11-202ENST00000374454 SSFA2P28290 1259 aa12.8□□□□□ -0.36
PDZD11-202ENST00000374454 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
PDZD11-202ENST00000374454 TAF1LQ8IZX4 1826 aa12.8□□□□□ -0.36
PDZD11-202ENST00000374454 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
PDZD11-202ENST00000374454 CANXP27824 592 aaKnown RBP12.79□□□□□ -0.36
PDZD11-202ENST00000374454 PDIA6Q15084 440 aa12.79□□□□□ -0.36
PDZD11-202ENST00000374454 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
PDZD11-202ENST00000374454 DDX21Q9NR30 783 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDZD11-202ENST00000374454 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
PDZD11-202ENST00000374454 A0A087WZG4 1122 aa12.78□□□□□ -0.36
PDZD11-202ENST00000374454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
PDZD11-202ENST00000374454 LRP10Q7Z4F1 713 aa12.78□□□□□ -0.36
PDZD11-202ENST00000374454 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
PDZD11-202ENST00000374454 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
PDZD11-202ENST00000374454 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
PDZD11-202ENST00000374454 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
PDZD11-202ENST00000374454 NECTIN2Q92692 538 aa12.77□□□□□ -0.37
PDZD11-202ENST00000374454 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
PDZD11-202ENST00000374454 STK31Q9BXU1 1019 aa12.77□□□□□ -0.37
PDZD11-202ENST00000374454 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.37
PDZD11-202ENST00000374454 PNPLA7Q6ZV29 1317 aa12.77□□□□□ -0.37
PDZD11-202ENST00000374454 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
PDZD11-202ENST00000374454 RGL2O15211 777 aa12.76□□□□□ -0.37
PDZD11-202ENST00000374454 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
PDZD11-202ENST00000374454 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
PDZD11-202ENST00000374454 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
PDZD11-202ENST00000374454 MYL6BP14649 208 aa12.75□□□□□ -0.37
PDZD11-202ENST00000374454 RFC4P35249 363 aa12.75□□□□□ -0.37
PDZD11-202ENST00000374454 COL15A1P39059 1388 aa12.75□□□□□ -0.37
PDZD11-202ENST00000374454 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
PDZD11-202ENST00000374454 R3HDM1Q15032 1099 aaKnown RBP12.75□□□□□ -0.37
PDZD11-202ENST00000374454 ALDH1L2Q3SY69 923 aa12.75□□□□□ -0.37
PDZD11-202ENST00000374454 SLC16A10Q8TF71 515 aa12.75□□□□□ -0.37
PDZD11-202ENST00000374454 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
PDZD11-202ENST00000374454 PHF14O94880 888 aa12.74□□□□□ -0.37
PDZD11-202ENST00000374454 ANXA1P04083 346 aa12.74□□□□□ -0.37
PDZD11-202ENST00000374454 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
PDZD11-202ENST00000374454 SMIM5Q71RC9 77 aa12.74□□□□□ -0.37
PDZD11-202ENST00000374454 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
PDZD11-202ENST00000374454 UBR3Q6ZT12 1888 aa12.74□□□□□ -0.37
PDZD11-202ENST00000374454 USP42Q9H9J4 1324 aaKnown RBP12.73□□□□□ -0.37
PDZD11-202ENST00000374454 ERVV-1B6SEH8 477 aa12.73□□□□□ -0.37
PDZD11-202ENST00000374454 ZPR1O75312 459 aa12.73□□□□□ -0.37
PDZD11-202ENST00000374454 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
PDZD11-202ENST00000374454 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
PDZD11-202ENST00000374454 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
PDZD11-202ENST00000374454 SSH1Q8WYL5 1049 aa12.73□□□□□ -0.37
PDZD11-202ENST00000374454 TBC1D2BQ9UPU7 963 aa12.73□□□□□ -0.37
PDZD11-202ENST00000374454 QSER1Q2KHR3 1735 aa12.73□□□□□ -0.37
PDZD11-202ENST00000374454 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
PDZD11-202ENST00000374454 TCERG1O14776 1098 aaKnown RBP12.72□□□□□ -0.37
PDZD11-202ENST00000374454 MSH5O43196 834 aa12.72□□□□□ -0.37
PDZD11-202ENST00000374454 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
PDZD11-202ENST00000374454 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
PDZD11-202ENST00000374454 TTLL7Q6ZT98 887 aa12.72□□□□□ -0.37
PDZD11-202ENST00000374454 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
PDZD11-202ENST00000374454 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
PDZD11-202ENST00000374454 MAP3K15Q6ZN16 1313 aa12.71□□□□□ -0.37
PDZD11-202ENST00000374454 CAMTA2O94983 1202 aa12.71□□□□□ -0.37
PDZD11-202ENST00000374454 GYS1P13807 737 aa12.71□□□□□ -0.37
PDZD11-202ENST00000374454 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
PDZD11-202ENST00000374454 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
PDZD11-202ENST00000374454 G2E3Q7L622 706 aa12.71□□□□□ -0.37
PDZD11-202ENST00000374454 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
PDZD11-202ENST00000374454 PDGFDQ9GZP0 370 aaPredicted RBP12.71□□□□□ -0.37
PDZD11-202ENST00000374454 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms