RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 BCL2L12Q9HB09 334 aa19.19■□□□□ 0.66
UBXN11-207ENST00000374223 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
UBXN11-207ENST00000374223 IFFO2Q5TF58 517 aa19.18■□□□□ 0.66
UBXN11-207ENST00000374223 TM4SF1P30408 202 aa19.17■□□□□ 0.66
UBXN11-207ENST00000374223 TGFB2P61812 414 aa19.17■□□□□ 0.66
UBXN11-207ENST00000374223 DCTN1Q14203 1278 aa19.17■□□□□ 0.66
UBXN11-207ENST00000374223 PARP3Q9Y6F1 533 aa19.17■□□□□ 0.66
UBXN11-207ENST00000374223 CEP350Q5VT06 3117 aa19.16■□□□□ 0.66
UBXN11-207ENST00000374223 PRAMEF22A3QJZ6 481 aa19.16■□□□□ 0.66
UBXN11-207ENST00000374223 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
UBXN11-207ENST00000374223 POLRMTO00411 1230 aaKnown RBP19.15■□□□□ 0.66
UBXN11-207ENST00000374223 U2AF1L5P0DN76 240 aaPredicted RBP19.15■□□□□ 0.66
UBXN11-207ENST00000374223 CHRNA5P30532 468 aa19.15■□□□□ 0.66
UBXN11-207ENST00000374223 U2AF1Q01081 240 aaKnown RBP eCLIP19.15■□□□□ 0.66
UBXN11-207ENST00000374223 GAS2L2Q8NHY3 880 aa19.15■□□□□ 0.66
UBXN11-207ENST00000374223 COL15A1P39059 1388 aa19.15■□□□□ 0.66
UBXN11-207ENST00000374223 CEMIPQ8WUJ3 1361 aa19.15■□□□□ 0.66
UBXN11-207ENST00000374223 NRXN2Q9P2S2 1712 aa19.15■□□□□ 0.66
UBXN11-207ENST00000374223 ARFGEF1Q9Y6D6 1849 aa19.15■□□□□ 0.66
UBXN11-207ENST00000374223 PIP4K2AP48426 406 aaPredicted RBP19.14■□□□□ 0.65
UBXN11-207ENST00000374223 ZNF790Q6PG37 636 aa19.14■□□□□ 0.65
UBXN11-207ENST00000374223 MCM10Q7L590 875 aa19.14■□□□□ 0.65
UBXN11-207ENST00000374223 BCS1LQ9Y276 419 aa19.14■□□□□ 0.65
UBXN11-207ENST00000374223 HEG1Q9ULI3 1381 aa19.13■□□□□ 0.65
UBXN11-207ENST00000374223 KIF3CO14782 793 aa19.13■□□□□ 0.65
UBXN11-207ENST00000374223 TEFQ10587 303 aa19.13■□□□□ 0.65
UBXN11-207ENST00000374223 NFIXQ14938 502 aa19.13■□□□□ 0.65
UBXN11-207ENST00000374223 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
UBXN11-207ENST00000374223 ANKRD31Q8N7Z5 1873 aa19.13■□□□□ 0.65
UBXN11-207ENST00000374223 A1BGP04217 495 aa19.12■□□□□ 0.65
UBXN11-207ENST00000374223 NARFQ9UHQ1 456 aa19.12■□□□□ 0.65
UBXN11-207ENST00000374223 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
UBXN11-207ENST00000374223 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
UBXN11-207ENST00000374223 CARMIL3Q8ND23 1372 aa19.1■□□□□ 0.65
UBXN11-207ENST00000374223 ZPR1O75312 459 aa19.1■□□□□ 0.65
UBXN11-207ENST00000374223 TTC5Q8N0Z6 440 aa19.1■□□□□ 0.65
UBXN11-207ENST00000374223 SBF1O95248 1867 aa19.1■□□□□ 0.65
UBXN11-207ENST00000374223 SCN7AQ01118 1682 aa19.1■□□□□ 0.65
UBXN11-207ENST00000374223 CCDC24Q8N4L8 307 aa19.09■□□□□ 0.65
UBXN11-207ENST00000374223 MIS18AQ9NYP9 233 aa19.09■□□□□ 0.65
UBXN11-207ENST00000374223 TBC1D2BQ9UPU7 963 aa19.09■□□□□ 0.65
UBXN11-207ENST00000374223 USP16Q9Y5T5 823 aa19.09■□□□□ 0.65
UBXN11-207ENST00000374223 BTBD11A6QL63 1104 aa19.08■□□□□ 0.65
UBXN11-207ENST00000374223 FCHSD2O94868 740 aa19.08■□□□□ 0.65
UBXN11-207ENST00000374223 BICDL1Q6ZP65 573 aa19.08■□□□□ 0.65
UBXN11-207ENST00000374223 NUDCQ9Y266 331 aa19.08■□□□□ 0.65
UBXN11-207ENST00000374223 CCDC88AQ3V6T2 1871 aa19.08■□□□□ 0.65
UBXN11-207ENST00000374223 DLEC1Q9Y238 1755 aa19.08■□□□□ 0.64
UBXN11-207ENST00000374223 TBC1D9BQ66K14 1250 aa19.07■□□□□ 0.64
UBXN11-207ENST00000374223 ARHGAP27Q6ZUM4 889 aa19.07■□□□□ 0.64
UBXN11-207ENST00000374223 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
UBXN11-207ENST00000374223 BCORQ6W2J9 1755 aa19.07■□□□□ 0.64
UBXN11-207ENST00000374223 COL11A2P13942 1736 aaPredicted RBP19.06■□□□□ 0.64
UBXN11-207ENST00000374223 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
UBXN11-207ENST00000374223 TOMM70O94826 608 aa19.05■□□□□ 0.64
UBXN11-207ENST00000374223 SERPINB2P05120 415 aa19.05■□□□□ 0.64
UBXN11-207ENST00000374223 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
UBXN11-207ENST00000374223 PLEKHF1Q96S99 279 aa19.05■□□□□ 0.64
UBXN11-207ENST00000374223 THUMPD2Q9BTF0 503 aaKnown RBP19.05■□□□□ 0.64
UBXN11-207ENST00000374223 KDM3BQ7LBC6 1761 aa19.05■□□□□ 0.64
UBXN11-207ENST00000374223 STARD3NLO95772 234 aa19.04■□□□□ 0.64
UBXN11-207ENST00000374223 APLP1P51693 650 aa19.04■□□□□ 0.64
UBXN11-207ENST00000374223 PIM2Q9P1W9 311 aa19.03■□□□□ 0.64
UBXN11-207ENST00000374223 PRELPP51888 382 aa19.02■□□□□ 0.64
UBXN11-207ENST00000374223 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
UBXN11-207ENST00000374223 NBPF26B4DH59 902 aa19.01■□□□□ 0.63
UBXN11-207ENST00000374223 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
UBXN11-207ENST00000374223 NBPF10Q6P3W6 841 aaKnown RBP19.01■□□□□ 0.63
UBXN11-207ENST00000374223 NBPF15Q8N660 670 aa19.01■□□□□ 0.63
UBXN11-207ENST00000374223 DALRD3Q5D0E6 543 aaKnown RBP19■□□□□ 0.63
UBXN11-207ENST00000374223 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
UBXN11-207ENST00000374223 RASSF7Q02833 373 aa19■□□□□ 0.63
UBXN11-207ENST00000374223 RTF1Q92541 710 aaKnown RBP19■□□□□ 0.63
UBXN11-207ENST00000374223 LAMB4A4D0S4 1761 aa18.99■□□□□ 0.63
UBXN11-207ENST00000374223 C9orf131Q5VYM1 1079 aa18.99■□□□□ 0.63
UBXN11-207ENST00000374223 NMRK2Q9NPI5 230 aa18.99■□□□□ 0.63
UBXN11-207ENST00000374223 PRR5LQ6MZQ0 368 aa18.98■□□□□ 0.63
UBXN11-207ENST00000374223 C2CD5Q86YS7 1000 aa18.98■□□□□ 0.63
UBXN11-207ENST00000374223 TEX13AQ9BXU3 409 aaPredicted RBP18.98■□□□□ 0.63
UBXN11-207ENST00000374223 SLX4Q8IY92 1834 aa18.97■□□□□ 0.63
UBXN11-207ENST00000374223 TAF7Q15545 349 aaPredicted RBP18.97■□□□□ 0.63
UBXN11-207ENST00000374223 DZIP3Q86Y13 1208 aaKnown RBP18.97■□□□□ 0.63
UBXN11-207ENST00000374223 RBM46Q8TBY0 533 aaKnown RBP18.97■□□□□ 0.63
UBXN11-207ENST00000374223 NUP98P52948 1817 aa18.96■□□□□ 0.63
UBXN11-207ENST00000374223 A0A087WZG4 1122 aa18.96■□□□□ 0.63
UBXN11-207ENST00000374223 HTATSF1O43719 755 aaKnown RBP18.96■□□□□ 0.63
UBXN11-207ENST00000374223 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
UBXN11-207ENST00000374223 NFE2L2Q16236 605 aa18.96■□□□□ 0.63
UBXN11-207ENST00000374223 C16orf71Q8IYS4 520 aaPredicted RBP18.96■□□□□ 0.63
UBXN11-207ENST00000374223 KDM2BQ8NHM5 1336 aa18.95■□□□□ 0.62
UBXN11-207ENST00000374223 WDR90Q96KV7 1748 aa18.95■□□□□ 0.62
UBXN11-207ENST00000374223 DNAJC5GQ8N7S2 189 aa18.95■□□□□ 0.62
UBXN11-207ENST00000374223 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
UBXN11-207ENST00000374223 HLFQ16534 295 aa18.94■□□□□ 0.62
UBXN11-207ENST00000374223 RNF181Q9P0P0 153 aa18.94■□□□□ 0.62
UBXN11-207ENST00000374223 FER1L6Q2WGJ9 1857 aa18.94■□□□□ 0.62
UBXN11-207ENST00000374223 FSTL1Q12841 308 aa18.93■□□□□ 0.62
UBXN11-207ENST00000374223 TNRC6CQ9HCJ0 1690 aaKnown RBP18.92■□□□□ 0.62
UBXN11-207ENST00000374223 TIAM2Q8IVF5 1701 aa18.92■□□□□ 0.62
UBXN11-207ENST00000374223 EIF4A1P60842 406 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms