RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
GJB1-202ENST00000374022 ITPK1Q13572 414 aa16.45■□□□□ 0.22
GJB1-202ENST00000374022 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
GJB1-202ENST00000374022 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
GJB1-202ENST00000374022 SMC4Q9NTJ3 1288 aa16.44■□□□□ 0.22
GJB1-202ENST00000374022 PLSCR1O15162 318 aa16.43■□□□□ 0.22
GJB1-202ENST00000374022 STARD3NLO95772 234 aa16.43■□□□□ 0.22
GJB1-202ENST00000374022 STK31Q9BXU1 1019 aa16.43■□□□□ 0.22
GJB1-202ENST00000374022 C4BP0C0L5 1744 aa16.43■□□□□ 0.22
GJB1-202ENST00000374022 KCNQ4P56696 695 aa16.43■□□□□ 0.22
GJB1-202ENST00000374022 CHPF2Q9P2E5 772 aa16.43■□□□□ 0.22
GJB1-202ENST00000374022 BCAR3O75815 825 aa16.42■□□□□ 0.22
GJB1-202ENST00000374022 CYP19A1P11511 503 aaPredicted RBP16.42■□□□□ 0.22
GJB1-202ENST00000374022 SF3B2Q13435 895 aaKnown RBP16.42■□□□□ 0.22
GJB1-202ENST00000374022 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
GJB1-202ENST00000374022 MRPL50Q8N5N7 158 aaKnown RBP16.41■□□□□ 0.22
GJB1-202ENST00000374022 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
GJB1-202ENST00000374022 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
GJB1-202ENST00000374022 LINC00116Q8NCU8 138 aa16.41■□□□□ 0.22
GJB1-202ENST00000374022 A1BGP04217 495 aa16.4■□□□□ 0.22
GJB1-202ENST00000374022 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
GJB1-202ENST00000374022 BRPF1P55201 1214 aaPredicted RBP16.4■□□□□ 0.22
GJB1-202ENST00000374022 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
GJB1-202ENST00000374022 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
GJB1-202ENST00000374022 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
GJB1-202ENST00000374022 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
GJB1-202ENST00000374022 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 ANXA1P04083 346 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
GJB1-202ENST00000374022 PDIA6Q15084 440 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 PROSER3Q2NL68 480 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 PROM2Q8N271 834 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 NUP188Q5SRE5 1749 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 CRKLP46109 303 aaKnown RBP16.39■□□□□ 0.21
GJB1-202ENST00000374022 BAG6P46379 1132 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
GJB1-202ENST00000374022 CCDC125Q86Z20 511 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
GJB1-202ENST00000374022 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
GJB1-202ENST00000374022 MYL6BP14649 208 aa16.38■□□□□ 0.21
GJB1-202ENST00000374022 EN1Q05925 392 aaPredicted RBP16.38■□□□□ 0.21
GJB1-202ENST00000374022 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
GJB1-202ENST00000374022 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
GJB1-202ENST00000374022 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
GJB1-202ENST00000374022 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
GJB1-202ENST00000374022 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
GJB1-202ENST00000374022 ILDR2Q71H61 639 aa16.37■□□□□ 0.21
GJB1-202ENST00000374022 G2E3Q7L622 706 aa16.37■□□□□ 0.21
GJB1-202ENST00000374022 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
GJB1-202ENST00000374022 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
GJB1-202ENST00000374022 ARFGEF2Q9Y6D5 1785 aa16.37■□□□□ 0.21
GJB1-202ENST00000374022 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
GJB1-202ENST00000374022 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
GJB1-202ENST00000374022 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
GJB1-202ENST00000374022 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
GJB1-202ENST00000374022 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
GJB1-202ENST00000374022 NOB1Q9ULX3 412 aaKnown RBP16.36■□□□□ 0.21
GJB1-202ENST00000374022 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
GJB1-202ENST00000374022 RRP1P56182 461 aaKnown RBP16.35■□□□□ 0.21
GJB1-202ENST00000374022 FLIIQ13045 1269 aa16.35■□□□□ 0.21
GJB1-202ENST00000374022 DEFB132Q7Z7B7 95 aa16.35■□□□□ 0.21
GJB1-202ENST00000374022 C4AP0C0L4 1744 aa16.35■□□□□ 0.21
GJB1-202ENST00000374022 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
GJB1-202ENST00000374022 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
GJB1-202ENST00000374022 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.35■□□□□ 0.21
GJB1-202ENST00000374022 PTPRCP08575 1304 aa16.34■□□□□ 0.21
GJB1-202ENST00000374022 IL6STP40189 918 aaPredicted RBP16.34■□□□□ 0.21
GJB1-202ENST00000374022 UPF1Q92900 1129 aaKnown RBP eCLIP16.34■□□□□ 0.211e-44■■■■■ 110.8
GJB1-202ENST00000374022 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
GJB1-202ENST00000374022 BCORQ6W2J9 1755 aa16.34■□□□□ 0.21
GJB1-202ENST00000374022 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.21
GJB1-202ENST00000374022 PLIN1O60240 522 aa16.33■□□□□ 0.21
GJB1-202ENST00000374022 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.21
GJB1-202ENST00000374022 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.21
GJB1-202ENST00000374022 NUP98P52948 1817 aa16.33■□□□□ 0.2
GJB1-202ENST00000374022 GNPATO15228 680 aa16.33■□□□□ 0.2
GJB1-202ENST00000374022 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
GJB1-202ENST00000374022 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
GJB1-202ENST00000374022 COPS6Q7L5N1 327 aa16.33■□□□□ 0.2
GJB1-202ENST00000374022 AK7Q96M32 723 aa16.33■□□□□ 0.2
GJB1-202ENST00000374022 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
GJB1-202ENST00000374022 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
GJB1-202ENST00000374022 ARHGAP45Q92619 1136 aa16.32■□□□□ 0.2
GJB1-202ENST00000374022 ANKRD36CQ5JPF3 1778 aa16.32■□□□□ 0.2
GJB1-202ENST00000374022 COL15A1P39059 1388 aa16.32■□□□□ 0.2
GJB1-202ENST00000374022 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
GJB1-202ENST00000374022 SCN7AQ01118 1682 aa16.31■□□□□ 0.2
GJB1-202ENST00000374022 TRIM27P14373 513 aa16.31■□□□□ 0.2
GJB1-202ENST00000374022 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
GJB1-202ENST00000374022 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
GJB1-202ENST00000374022 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
GJB1-202ENST00000374022 RPS6KA4O75676 772 aa16.31■□□□□ 0.2
GJB1-202ENST00000374022 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
GJB1-202ENST00000374022 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
GJB1-202ENST00000374022 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
GJB1-202ENST00000374022 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
GJB1-202ENST00000374022 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms