RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 DDX11L8A8MPP1 907 aa16.02■□□□□ 0.15
NCDN-203ENST00000373253 ATP8B2P98198 1209 aa16.02■□□□□ 0.15
NCDN-203ENST00000373253 VPS37CA5D8V6 355 aaPredicted RBP16.01■□□□□ 0.15
NCDN-203ENST00000373253 HSP90B1P14625 803 aaKnown RBP16.01■□□□□ 0.15
NCDN-203ENST00000373253 EIF4A1P60842 406 aaKnown RBP16.01■□□□□ 0.15
NCDN-203ENST00000373253 AKAP4Q5JQC9 854 aa16.01■□□□□ 0.15
NCDN-203ENST00000373253 AMOTQ4VCS5 1084 aa16.01■□□□□ 0.15
NCDN-203ENST00000373253 CDK12Q9NYV4 1490 aaPredicted RBP16.01■□□□□ 0.15
NCDN-203ENST00000373253 L1TD1Q5T7N2 865 aaKnown RBP16■□□□□ 0.15
NCDN-203ENST00000373253 CNTROBQ8N137 903 aa16■□□□□ 0.15
NCDN-203ENST00000373253 PKP1Q13835 747 aa16■□□□□ 0.15
NCDN-203ENST00000373253 USP16Q9Y5T5 823 aa16■□□□□ 0.15
NCDN-203ENST00000373253 NPHP1O15259 732 aa16■□□□□ 0.15
NCDN-203ENST00000373253 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
NCDN-203ENST00000373253 A0A087WZG4 1122 aa15.99■□□□□ 0.15
NCDN-203ENST00000373253 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
NCDN-203ENST00000373253 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
NCDN-203ENST00000373253 GPTP24298 496 aa15.99■□□□□ 0.15
NCDN-203ENST00000373253 VSIG10Q8N0Z9 540 aa15.99■□□□□ 0.15
NCDN-203ENST00000373253 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
NCDN-203ENST00000373253 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
NCDN-203ENST00000373253 EDC3Q96F86 508 aaKnown RBP15.99■□□□□ 0.15
NCDN-203ENST00000373253 PKNOX2Q96KN3 472 aa15.99■□□□□ 0.15
NCDN-203ENST00000373253 NAP1L5Q96NT1 182 aaPredicted RBP15.99■□□□□ 0.15
NCDN-203ENST00000373253 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
NCDN-203ENST00000373253 USP26Q9BXU7 913 aa15.98■□□□□ 0.15
NCDN-203ENST00000373253 CHMP4AQ9BY43 222 aa15.98■□□□□ 0.15
NCDN-203ENST00000373253 COL3A1P02461 1466 aaPredicted RBP15.98■□□□□ 0.15
NCDN-203ENST00000373253 SOS1Q07889 1333 aaPredicted RBP15.97■□□□□ 0.15
NCDN-203ENST00000373253 PALD1Q9ULE6 856 aa15.97■□□□□ 0.15
NCDN-203ENST00000373253 IFNL2Q8IZJ0 200 aa15.96■□□□□ 0.15
NCDN-203ENST00000373253 JAKMIP1Q96N16 626 aaKnown RBP15.96■□□□□ 0.15
NCDN-203ENST00000373253 SNRKQ9NRH2 765 aa15.96■□□□□ 0.15
NCDN-203ENST00000373253 CASTP20810 708 aaKnown RBP15.96■□□□□ 0.15
NCDN-203ENST00000373253 FERMT3Q86UX7 667 aa15.96■□□□□ 0.15
NCDN-203ENST00000373253 ARHGEF25Q86VW2 580 aa15.96■□□□□ 0.15
NCDN-203ENST00000373253 BICC1Q9H694 974 aaKnown RBP15.96■□□□□ 0.15
NCDN-203ENST00000373253 ARHGEF10O15013 1369 aa15.96■□□□□ 0.14
NCDN-203ENST00000373253 ANKRD13DQ6ZTN6 518 aa15.96■□□□□ 0.14
NCDN-203ENST00000373253 IFT172Q9UG01 1749 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 A1BGP04217 495 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 HSP90AB4PQ58FF6 505 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 RBM27Q9P2N5 1060 aaKnown RBP15.95■□□□□ 0.14
NCDN-203ENST00000373253 FIBPO43427 364 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 FKBP4Q02790 459 aaKnown RBP eCLIP15.95■□□□□ 0.14
NCDN-203ENST00000373253 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
NCDN-203ENST00000373253 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 ESYT1Q9BSJ8 1104 aa15.95■□□□□ 0.14
NCDN-203ENST00000373253 ZKSCAN1P17029 563 aaPredicted RBP15.94■□□□□ 0.14
NCDN-203ENST00000373253 GIGYF1O75420 1035 aaPredicted RBP15.94■□□□□ 0.14
NCDN-203ENST00000373253 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
NCDN-203ENST00000373253 GOLGA6L4A6NEF3 574 aa15.93■□□□□ 0.14
NCDN-203ENST00000373253 GRM8O00222 908 aa15.93■□□□□ 0.14
NCDN-203ENST00000373253 TMEM94Q12767 1356 aa15.93■□□□□ 0.14
NCDN-203ENST00000373253 RBM25P49756 843 aaKnown RBP15.93■□□□□ 0.14
NCDN-203ENST00000373253 SMC3Q9UQE7 1217 aa15.93■□□□□ 0.14
NCDN-203ENST00000373253 CHMLP26374 656 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 WASHC4Q2M389 1173 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 LARP1Q6PKG0 1096 aaKnown RBP15.92■□□□□ 0.14
NCDN-203ENST00000373253 DDX46Q7L014 1031 aaKnown RBP15.92■□□□□ 0.14
NCDN-203ENST00000373253 CCDC83Q8IWF9 413 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 RUFY2Q8WXA3 655 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 HDAC5Q9UQL6 1122 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
NCDN-203ENST00000373253 CEBPZQ03701 1054 aaKnown RBP15.92■□□□□ 0.14
NCDN-203ENST00000373253 TMX3Q96JJ7 454 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 LRRC2Q9BYS8 371 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 HYPKQ9NX55 129 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 NUCB2P80303 420 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 NECAB1Q8N987 351 aa15.92■□□□□ 0.14
NCDN-203ENST00000373253 KIAA0232Q92628 1395 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 ARID3AQ99856 593 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 LMBR1LQ6UX01 489 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 APPP05067 770 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 HSP90AB3PQ58FF7 597 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 AGLP35573 1532 aa15.91■□□□□ 0.14
NCDN-203ENST00000373253 ANTXR1Q9H6X2 564 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 OVOS2A0A0J9YW53 1432 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 OVOS2Q6IE36 1432 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 BRPF1P55201 1214 aaPredicted RBP15.9■□□□□ 0.14
NCDN-203ENST00000373253 CHMP4CQ96CF2 233 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 ZNF594Q96JF6 807 aaPredicted RBP15.9■□□□□ 0.14
NCDN-203ENST00000373253 NPHP3Q7Z494 1330 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 MED14O60244 1454 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 BAG4O95429 457 aaKnown RBP15.9■□□□□ 0.14
NCDN-203ENST00000373253 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 ECHDC1Q9NTX5 307 aa15.9■□□□□ 0.14
NCDN-203ENST00000373253 GLRX3O76003 335 aaKnown RBP15.89■□□□□ 0.13
NCDN-203ENST00000373253 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
NCDN-203ENST00000373253 GTF2E1P29083 439 aaPredicted RBP15.89■□□□□ 0.13
NCDN-203ENST00000373253 BEND3Q5T5X7 828 aa15.89■□□□□ 0.13
NCDN-203ENST00000373253 DDX11Q96FC9 970 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms