RNA–Protein interactions for RNA: ENST00000372275.5

TMEM254-203, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-203ENST00000372275 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
TMEM254-203ENST00000372275 DICER1Q9UPY3 1922 aaKnown RBP12.84□□□□□ -0.35
TMEM254-203ENST00000372275 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
TMEM254-203ENST00000372275 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
TMEM254-203ENST00000372275 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.36
TMEM254-203ENST00000372275 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
TMEM254-203ENST00000372275 JMYQ8N9B5 988 aa12.83□□□□□ -0.36
TMEM254-203ENST00000372275 WASHC2AQ641Q2 1341 aa12.83□□□□□ -0.36
TMEM254-203ENST00000372275 CNTNAP4Q9C0A0 1308 aa12.83□□□□□ -0.36
TMEM254-203ENST00000372275 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
TMEM254-203ENST00000372275 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
TMEM254-203ENST00000372275 CABP4P57796 275 aa12.82□□□□□ -0.36
TMEM254-203ENST00000372275 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
TMEM254-203ENST00000372275 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
TMEM254-203ENST00000372275 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
TMEM254-203ENST00000372275 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
TMEM254-203ENST00000372275 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
TMEM254-203ENST00000372275 FSTL1Q12841 308 aa12.8□□□□□ -0.36
TMEM254-203ENST00000372275 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
TMEM254-203ENST00000372275 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
TMEM254-203ENST00000372275 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
TMEM254-203ENST00000372275 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
TMEM254-203ENST00000372275 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
TMEM254-203ENST00000372275 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
TMEM254-203ENST00000372275 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
TMEM254-203ENST00000372275 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
TMEM254-203ENST00000372275 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
TMEM254-203ENST00000372275 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
TMEM254-203ENST00000372275 SLC39A6Q13433 755 aa12.78□□□□□ -0.36
TMEM254-203ENST00000372275 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
TMEM254-203ENST00000372275 BICDL1Q6ZP65 573 aa12.78□□□□□ -0.36
TMEM254-203ENST00000372275 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
TMEM254-203ENST00000372275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMEM254-203ENST00000372275 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
TMEM254-203ENST00000372275 SLX4Q8IY92 1834 aa12.77□□□□□ -0.37
TMEM254-203ENST00000372275 ERVV-2B6SEH9 535 aa12.77□□□□□ -0.37
TMEM254-203ENST00000372275 MTHFSP49914 203 aa12.77□□□□□ -0.37
TMEM254-203ENST00000372275 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
TMEM254-203ENST00000372275 NFIXQ14938 502 aa12.76□□□□□ -0.37
TMEM254-203ENST00000372275 POTECB2RU33 542 aa12.75□□□□□ -0.37
TMEM254-203ENST00000372275 NFKBIEO00221 500 aa12.75□□□□□ -0.37
TMEM254-203ENST00000372275 TM4SF1P30408 202 aa12.75□□□□□ -0.37
TMEM254-203ENST00000372275 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
TMEM254-203ENST00000372275 UBR2Q8IWV8 1755 aa12.75□□□□□ -0.37
TMEM254-203ENST00000372275 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
TMEM254-203ENST00000372275 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
TMEM254-203ENST00000372275 SCN7AQ01118 1682 aa12.74□□□□□ -0.37
TMEM254-203ENST00000372275 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
TMEM254-203ENST00000372275 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
TMEM254-203ENST00000372275 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
TMEM254-203ENST00000372275 COL15A1P39059 1388 aa12.73□□□□□ -0.37
TMEM254-203ENST00000372275 GLTPD2A6NH11 291 aa12.73□□□□□ -0.37
TMEM254-203ENST00000372275 ZPR1O75312 459 aa12.73□□□□□ -0.37
TMEM254-203ENST00000372275 C1orf141Q5JVX7 400 aa12.73□□□□□ -0.37
TMEM254-203ENST00000372275 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
TMEM254-203ENST00000372275 SERPINB2P05120 415 aa12.72□□□□□ -0.37
TMEM254-203ENST00000372275 LMNB1P20700 586 aa12.72□□□□□ -0.37
TMEM254-203ENST00000372275 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
TMEM254-203ENST00000372275 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
TMEM254-203ENST00000372275 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
TMEM254-203ENST00000372275 FOXN1O15353 648 aa12.71□□□□□ -0.37
TMEM254-203ENST00000372275 C21orf2O43822 256 aa12.71□□□□□ -0.37
TMEM254-203ENST00000372275 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
TMEM254-203ENST00000372275 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
TMEM254-203ENST00000372275 ZNF622Q969S3 477 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMEM254-203ENST00000372275 HMOX1P09601 288 aa12.7□□□□□ -0.38
TMEM254-203ENST00000372275 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-203ENST00000372275 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
TMEM254-203ENST00000372275 BCORQ6W2J9 1755 aa12.7□□□□□ -0.38
TMEM254-203ENST00000372275 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
TMEM254-203ENST00000372275 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
TMEM254-203ENST00000372275 TTLL6Q8N841 843 aa12.69□□□□□ -0.38
TMEM254-203ENST00000372275 MRC1P22897 1456 aa12.68□□□□□ -0.38
TMEM254-203ENST00000372275 PIP4K2AP48426 406 aaPredicted RBP12.68□□□□□ -0.38
TMEM254-203ENST00000372275 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
TMEM254-203ENST00000372275 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
TMEM254-203ENST00000372275 PANK3Q9H999 370 aa12.68□□□□□ -0.38
TMEM254-203ENST00000372275 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
TMEM254-203ENST00000372275 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
TMEM254-203ENST00000372275 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
TMEM254-203ENST00000372275 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
TMEM254-203ENST00000372275 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
TMEM254-203ENST00000372275 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
TMEM254-203ENST00000372275 H0YIN7 160 aa12.66□□□□□ -0.38
TMEM254-203ENST00000372275 RNMTO43148 476 aaKnown RBP12.66□□□□□ -0.38
TMEM254-203ENST00000372275 MORC1Q86VD1 984 aa12.66□□□□□ -0.38
TMEM254-203ENST00000372275 TBC1D2BQ9UPU7 963 aa12.66□□□□□ -0.38
TMEM254-203ENST00000372275 SCN4AP35499 1836 aa12.66□□□□□ -0.38
TMEM254-203ENST00000372275 IL13P35225 146 aa12.64□□□□□ -0.39
TMEM254-203ENST00000372275 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
TMEM254-203ENST00000372275 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
TMEM254-203ENST00000372275 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
TMEM254-203ENST00000372275 SLC51AQ86UW1 340 aa12.64□□□□□ -0.39
TMEM254-203ENST00000372275 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
TMEM254-203ENST00000372275 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
TMEM254-203ENST00000372275 VEGFBP49765 207 aa12.63□□□□□ -0.39
TMEM254-203ENST00000372275 FMR1Q06787 632 aaKnown RBP eCLIP12.63□□□□□ -0.39
TMEM254-203ENST00000372275 MTHFSDQ2M296 383 aaKnown RBP12.63□□□□□ -0.39
TMEM254-203ENST00000372275 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
TMEM254-203ENST00000372275 CNTNAP1P78357 1384 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms