RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 TNNQ9UQP3 1299 aa21.11■□□□□ 0.97
SCP2-201ENST00000371509 COG6Q9Y2V7 657 aa21.11■□□□□ 0.97
SCP2-201ENST00000371509 SNRPA1P09661 255 aaKnown RBP21.09■□□□□ 0.97
SCP2-201ENST00000371509 USP16Q9Y5T5 823 aa21.09■□□□□ 0.97
SCP2-201ENST00000371509 KCNQ4P56696 695 aa21.09■□□□□ 0.97
SCP2-201ENST00000371509 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
SCP2-201ENST00000371509 LOC102724428A0A0B4J2F2 783 aa21.08■□□□□ 0.97
SCP2-201ENST00000371509 BRPF1P55201 1214 aaPredicted RBP21.08■□□□□ 0.97
SCP2-201ENST00000371509 SIK1P57059 783 aa21.08■□□□□ 0.97
SCP2-201ENST00000371509 HDGFL1Q5TGJ6 251 aa21.08■□□□□ 0.97
SCP2-201ENST00000371509 CLUAP1Q96AJ1 413 aa21.08■□□□□ 0.97
SCP2-201ENST00000371509 LAMB4A4D0S4 1761 aa21.08■□□□□ 0.96
SCP2-201ENST00000371509 KIF16BQ96L93 1317 aa21.08■□□□□ 0.96
SCP2-201ENST00000371509 TJP1Q07157 1748 aa21.07■□□□□ 0.96
SCP2-201ENST00000371509 TNS1Q9HBL0 1735 aaKnown RBP21.07■□□□□ 0.96
SCP2-201ENST00000371509 MS4A1P11836 297 aa21.07■□□□□ 0.96
SCP2-201ENST00000371509 DNAJC10Q8IXB1 793 aa21.07■□□□□ 0.96
SCP2-201ENST00000371509 LY75O60449 1722 aa21.07■□□□□ 0.96
SCP2-201ENST00000371509 HOXB7P09629 217 aa21.06■□□□□ 0.96
SCP2-201ENST00000371509 ATP6V1AP38606 617 aa21.06■□□□□ 0.96
SCP2-201ENST00000371509 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
SCP2-201ENST00000371509 APBA3O96018 575 aa21.05■□□□□ 0.96
SCP2-201ENST00000371509 TRIM27P14373 513 aa21.05■□□□□ 0.96
SCP2-201ENST00000371509 PIP4K2AP48426 406 aaPredicted RBP21.05■□□□□ 0.96
SCP2-201ENST00000371509 MVPQ14764 893 aaKnown RBP21.05■□□□□ 0.96
SCP2-201ENST00000371509 DZIP1LQ8IYY4 767 aaKnown RBP21.05■□□□□ 0.96
SCP2-201ENST00000371509 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
SCP2-201ENST00000371509 ITPK1Q13572 414 aa21.04■□□□□ 0.96
SCP2-201ENST00000371509 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
SCP2-201ENST00000371509 ATF7IPQ6VMQ6 1270 aa21.04■□□□□ 0.96
SCP2-201ENST00000371509 ANXA1P04083 346 aa21.03■□□□□ 0.96
SCP2-201ENST00000371509 CHPF2Q9P2E5 772 aa21.03■□□□□ 0.96
SCP2-201ENST00000371509 SLC4A2P04920 1241 aa21.02■□□□□ 0.96
SCP2-201ENST00000371509 FTSJ3Q8IY81 847 aaKnown RBP21.02■□□□□ 0.96
SCP2-201ENST00000371509 CCNL1Q9UK58 526 aaPredicted RBP21.02■□□□□ 0.96
SCP2-201ENST00000371509 NOB1Q9ULX3 412 aaKnown RBP21.02■□□□□ 0.96
SCP2-201ENST00000371509 A1BGP04217 495 aa21.01■□□□□ 0.95
SCP2-201ENST00000371509 PROSER3Q2NL68 480 aa21.01■□□□□ 0.95
SCP2-201ENST00000371509 MRPL50Q8N5N7 158 aaKnown RBP21.01■□□□□ 0.95
SCP2-201ENST00000371509 CACNA1FO60840 1977 aa21.01■□□□□ 0.95
SCP2-201ENST00000371509 IPO8O15397 1037 aaKnown RBP21.01■□□□□ 0.95
SCP2-201ENST00000371509 STK31Q9BXU1 1019 aa21.01■□□□□ 0.95
SCP2-201ENST00000371509 ZNF831Q5JPB2 1677 aa21■□□□□ 0.95
SCP2-201ENST00000371509 COL5A3P25940 1745 aaPredicted RBP21■□□□□ 0.95
SCP2-201ENST00000371509 CYP19A1P11511 503 aaPredicted RBP21■□□□□ 0.95
SCP2-201ENST00000371509 TEX13AQ9BXU3 409 aaPredicted RBP21■□□□□ 0.95
SCP2-201ENST00000371509 CICQ96RK0 1608 aaPredicted RBP20.99■□□□□ 0.95
SCP2-201ENST00000371509 MYL6BP14649 208 aa20.99■□□□□ 0.95
SCP2-201ENST00000371509 LRRC4BQ9NT99 713 aa20.99■□□□□ 0.95
SCP2-201ENST00000371509 STARD3NLO95772 234 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 PDIA6Q15084 440 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 G2E3Q7L622 706 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 TAF1LQ8IZX4 1826 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 NBPF26B4DH59 902 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 IGHDP01880 384 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 NBPF14Q5TI25 921 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 NBPF10Q6P3W6 841 aaKnown RBP20.98■□□□□ 0.95
SCP2-201ENST00000371509 PROM2Q8N271 834 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 NBPF15Q8N660 670 aa20.98■□□□□ 0.95
SCP2-201ENST00000371509 PHAXQ9H814 394 aaKnown RBP20.98■□□□□ 0.95
SCP2-201ENST00000371509 DBF4Q9UBU7 674 aaPredicted RBP20.98■□□□□ 0.95
SCP2-201ENST00000371509 ARHGAP45Q92619 1136 aa20.97■□□□□ 0.95
SCP2-201ENST00000371509 PLSCR1O15162 318 aa20.96■□□□□ 0.95
SCP2-201ENST00000371509 TXNRD1Q16881 649 aa20.96■□□□□ 0.95
SCP2-201ENST00000371509 DDX21Q9NR30 783 aaKnown RBP eCLIP20.96■□□□□ 0.95
SCP2-201ENST00000371509 MYH14Q7Z406 1995 aaKnown RBP20.96■□□□□ 0.95
SCP2-201ENST00000371509 CRKLP46109 303 aaKnown RBP20.96■□□□□ 0.95
SCP2-201ENST00000371509 ZBTB1Q9Y2K1 713 aa20.96■□□□□ 0.95
SCP2-201ENST00000371509 PCDHB15Q9Y5E8 787 aa20.96■□□□□ 0.95
SCP2-201ENST00000371509 EN1Q05925 392 aaPredicted RBP20.95■□□□□ 0.94
SCP2-201ENST00000371509 SKAP1Q86WV1 359 aa20.95■□□□□ 0.94
SCP2-201ENST00000371509 CHMP4AQ9BY43 222 aa20.95■□□□□ 0.94
SCP2-201ENST00000371509 DDX19BQ9UMR2 479 aa20.95■□□□□ 0.94
SCP2-201ENST00000371509 ZNF330Q9Y3S2 320 aaPredicted RBP20.95■□□□□ 0.94
SCP2-201ENST00000371509 SF3B2Q13435 895 aaKnown RBP20.94■□□□□ 0.94
SCP2-201ENST00000371509 INTS5Q6P9B9 1019 aaKnown RBP20.94■□□□□ 0.94
SCP2-201ENST00000371509 DEFB132Q7Z7B7 95 aa20.94■□□□□ 0.94
SCP2-201ENST00000371509 TMEM57Q8N5G2 664 aa20.94■□□□□ 0.94
SCP2-201ENST00000371509 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
SCP2-201ENST00000371509 FLIIQ13045 1269 aa20.93■□□□□ 0.94
SCP2-201ENST00000371509 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
SCP2-201ENST00000371509 LRP10Q7Z4F1 713 aa20.93■□□□□ 0.94
SCP2-201ENST00000371509 RGPD3A6NKT7 1758 aaPredicted RBP20.93■□□□□ 0.94
SCP2-201ENST00000371509 RGPD4Q7Z3J3 1758 aa20.93■□□□□ 0.94
SCP2-201ENST00000371509 C4BP0C0L5 1744 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 EZH2Q15910 746 aaKnown RBP20.92■□□□□ 0.94
SCP2-201ENST00000371509 ILDR2Q71H61 639 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 CCDC87Q9NVE4 849 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 ABCC4O15439 1325 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 ERBB4Q15303 1308 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 ITPRIPQ8IWB1 547 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 RREB1Q92766 1687 aa20.92■□□□□ 0.94
SCP2-201ENST00000371509 N4BP2Q86UW6 1770 aaPredicted RBP20.92■□□□□ 0.94
SCP2-201ENST00000371509 SMIM5Q71RC9 77 aa20.91■□□□□ 0.94
SCP2-201ENST00000371509 FKBP5Q13451 457 aaPredicted RBP20.9■□□□□ 0.94
SCP2-201ENST00000371509 COPS6Q7L5N1 327 aa20.9■□□□□ 0.94
SCP2-201ENST00000371509 XAGE3Q8WTP9 111 aa20.9■□□□□ 0.94
SCP2-201ENST00000371509 CAMKK2Q96RR4 588 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms