RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
PDE6C-201ENST00000371447 RHPN1Q8TCX5 695 aa14.38□□□□□ -0.11
PDE6C-201ENST00000371447 IL25Q9H293 177 aa14.38□□□□□ -0.11
PDE6C-201ENST00000371447 PANK2Q9BZ23 570 aa14.37□□□□□ -0.11
PDE6C-201ENST00000371447 SPG7Q9UQ90 795 aa14.37□□□□□ -0.11
PDE6C-201ENST00000371447 ADGRL3Q9HAR2 1447 aa14.37□□□□□ -0.11
PDE6C-201ENST00000371447 AMOTQ4VCS5 1084 aa14.37□□□□□ -0.11
PDE6C-201ENST00000371447 BEND3Q5T5X7 828 aa14.37□□□□□ -0.11
PDE6C-201ENST00000371447 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
PDE6C-201ENST00000371447 TMEM94Q12767 1356 aa14.37□□□□□ -0.11
PDE6C-201ENST00000371447 TATP17735 454 aaPredicted RBP14.36□□□□□ -0.11
PDE6C-201ENST00000371447 CCDC8Q9H0W5 538 aaPredicted RBP14.36□□□□□ -0.11
PDE6C-201ENST00000371447 TOPAZ1Q8N9V7 1692 aa14.36□□□□□ -0.11
PDE6C-201ENST00000371447 ST18O60284 1047 aa14.36□□□□□ -0.11
PDE6C-201ENST00000371447 RABEP1Q15276 862 aa14.36□□□□□ -0.11
PDE6C-201ENST00000371447 MCTP1Q6DN14 999 aa14.36□□□□□ -0.11
PDE6C-201ENST00000371447 SNX21Q969T3 373 aa14.36□□□□□ -0.11
PDE6C-201ENST00000371447 USP16Q9Y5T5 823 aa14.36□□□□□ -0.11
PDE6C-201ENST00000371447 KIF24Q5T7B8 1368 aa14.35□□□□□ -0.11
PDE6C-201ENST00000371447 PXDNQ92626 1479 aa14.35□□□□□ -0.11
PDE6C-201ENST00000371447 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
PDE6C-201ENST00000371447 TTC5Q8N0Z6 440 aa14.35□□□□□ -0.11
PDE6C-201ENST00000371447 ZNF496Q96IT1 587 aaPredicted RBP14.35□□□□□ -0.11
PDE6C-201ENST00000371447 CPA1P15085 419 aa14.35□□□□□ -0.11
PDE6C-201ENST00000371447 XAGE3Q8WTP9 111 aa14.35□□□□□ -0.11
PDE6C-201ENST00000371447 MYD88Q99836 296 aa14.35□□□□□ -0.11
PDE6C-201ENST00000371447 GOLGA6L3A6NEY3 463 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 CHMLP26374 656 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 ESYT1Q9BSJ8 1104 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 NDUFB9Q9Y6M9 179 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 ERBB3P21860 1342 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 TOM1L2Q6ZVM7 507 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 PRDM11Q9NQV5 511 aa14.34□□□□□ -0.11
PDE6C-201ENST00000371447 IFIT2P09913 472 aaKnown RBP14.33□□□□□ -0.12
PDE6C-201ENST00000371447 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
PDE6C-201ENST00000371447 AACSQ86V21 672 aa14.33□□□□□ -0.12
PDE6C-201ENST00000371447 IBTKQ9P2D0 1353 aaPredicted RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 DDX49Q9Y6V7 483 aaKnown RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 VIRMAQ69YN4 1812 aaKnown RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
PDE6C-201ENST00000371447 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 SSH3Q8TE77 659 aa14.32□□□□□ -0.12
PDE6C-201ENST00000371447 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
PDE6C-201ENST00000371447 CCDC85AQ96PX6 553 aaPredicted RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 BICC1Q9H694 974 aaKnown RBP14.32□□□□□ -0.12
PDE6C-201ENST00000371447 CABP4P57796 275 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 ADCY9O60503 1353 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 CEMIPQ8WUJ3 1361 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 KCNJ4P48050 445 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 NWD1Q149M9 1564 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 MCCP23508 829 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 BOLA2Q9H3K6 86 aa14.31□□□□□ -0.12
PDE6C-201ENST00000371447 DDX11L8A8MPP1 907 aa14.3□□□□□ -0.12
PDE6C-201ENST00000371447 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
PDE6C-201ENST00000371447 KIAA1211Q6ZU35 1233 aa14.3□□□□□ -0.12
PDE6C-201ENST00000371447 EDC3Q96F86 508 aaKnown RBP14.3□□□□□ -0.12
PDE6C-201ENST00000371447 XRN1Q8IZH2 1706 aaKnown RBP14.3□□□□□ -0.12
PDE6C-201ENST00000371447 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
PDE6C-201ENST00000371447 NEXNQ0ZGT2 675 aa14.3□□□□□ -0.12
PDE6C-201ENST00000371447 G3BP1Q13283 466 aaKnown RBP eCLIP14.3□□□□□ -0.12
PDE6C-201ENST00000371447 UBE3BQ7Z3V4 1068 aa14.3□□□□□ -0.12
PDE6C-201ENST00000371447 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
PDE6C-201ENST00000371447 RGPD1P0DJD0 1748 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 NALCNQ8IZF0 1738 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 GOLGA6L22H0YM25 854 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 CYP27B1O15528 508 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
PDE6C-201ENST00000371447 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
PDE6C-201ENST00000371447 GRM8O00222 908 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 XRCC6P12956 609 aaKnown RBP eCLIP14.29□□□□□ -0.12
PDE6C-201ENST00000371447 PHKG2P15735 406 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 SLC52A2Q9HAB3 445 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 NPHP3Q7Z494 1330 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
PDE6C-201ENST00000371447 EVA1CP58658 441 aa14.28□□□□□ -0.12
PDE6C-201ENST00000371447 TMX3Q96JJ7 454 aa14.28□□□□□ -0.12
PDE6C-201ENST00000371447 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
PDE6C-201ENST00000371447 C1orf167Q5SNV9 1468 aa14.28□□□□□ -0.12
PDE6C-201ENST00000371447 IFNL2Q8IZJ0 200 aa14.28□□□□□ -0.12
PDE6C-201ENST00000371447 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
PDE6C-201ENST00000371447 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
PDE6C-201ENST00000371447 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
PDE6C-201ENST00000371447 EPHA10Q5JZY3 1008 aa14.27□□□□□ -0.12
PDE6C-201ENST00000371447 HYPKQ9NX55 129 aa14.27□□□□□ -0.12
PDE6C-201ENST00000371447 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
PDE6C-201ENST00000371447 CADPS2Q86UW7 1296 aa14.27□□□□□ -0.13
PDE6C-201ENST00000371447 CNTROBQ8N137 903 aa14.27□□□□□ -0.13
PDE6C-201ENST00000371447 OSBPL3Q9H4L5 887 aa14.27□□□□□ -0.13
PDE6C-201ENST00000371447 DDX21Q9NR30 783 aaKnown RBP eCLIP14.27□□□□□ -0.13
PDE6C-201ENST00000371447 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
PDE6C-201ENST00000371447 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.13
PDE6C-201ENST00000371447 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
PDE6C-201ENST00000371447 AK9Q5TCS8 1911 aa14.26□□□□□ -0.13
PDE6C-201ENST00000371447 ANKRD13DQ6ZTN6 518 aa14.26□□□□□ -0.13
PDE6C-201ENST00000371447 SYTL4Q96C24 671 aaPredicted RBP14.26□□□□□ -0.13
PDE6C-201ENST00000371447 A1BGP04217 495 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms