RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 BCL11BQ9C0K0 894 aaPredicted RBP13.56□□□□□ -0.24
TCTN3-202ENST00000371209 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
TCTN3-202ENST00000371209 HEG1Q9ULI3 1381 aa13.56□□□□□ -0.24
TCTN3-202ENST00000371209 TTC5Q8N0Z6 440 aa13.55□□□□□ -0.24
TCTN3-202ENST00000371209 C5P01031 1676 aa13.55□□□□□ -0.24
TCTN3-202ENST00000371209 ELL2O00472 640 aaPredicted RBP13.55□□□□□ -0.24
TCTN3-202ENST00000371209 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
TCTN3-202ENST00000371209 TNS1Q9HBL0 1735 aaKnown RBP13.54□□□□□ -0.24
TCTN3-202ENST00000371209 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
TCTN3-202ENST00000371209 PRAMEF22A3QJZ6 481 aa13.54□□□□□ -0.24
TCTN3-202ENST00000371209 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
TCTN3-202ENST00000371209 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
TCTN3-202ENST00000371209 VAMP4O75379 141 aa13.53□□□□□ -0.24
TCTN3-202ENST00000371209 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
TCTN3-202ENST00000371209 TWISTNBQ3B726 338 aaPredicted RBP13.53□□□□□ -0.24
TCTN3-202ENST00000371209 TJP1Q07157 1748 aa13.52□□□□□ -0.25
TCTN3-202ENST00000371209 SMARCC1Q92922 1105 aaPredicted RBP13.52□□□□□ -0.25
TCTN3-202ENST00000371209 LY75O60449 1722 aa13.51□□□□□ -0.25
TCTN3-202ENST00000371209 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
TCTN3-202ENST00000371209 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
TCTN3-202ENST00000371209 GABBR2O75899 941 aa13.5□□□□□ -0.25
TCTN3-202ENST00000371209 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
TCTN3-202ENST00000371209 CT47B1P0C2W7 299 aaPredicted RBP13.5□□□□□ -0.25
TCTN3-202ENST00000371209 SIK1P57059 783 aa13.5□□□□□ -0.25
TCTN3-202ENST00000371209 LAMB4A4D0S4 1761 aa13.5□□□□□ -0.25
TCTN3-202ENST00000371209 CICQ96RK0 1608 aaPredicted RBP13.5□□□□□ -0.25
TCTN3-202ENST00000371209 HOXB7P09629 217 aa13.49□□□□□ -0.25
TCTN3-202ENST00000371209 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
TCTN3-202ENST00000371209 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
TCTN3-202ENST00000371209 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
TCTN3-202ENST00000371209 ZNF831Q5JPB2 1677 aa13.49□□□□□ -0.25
TCTN3-202ENST00000371209 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
TCTN3-202ENST00000371209 RARSP54136 660 aaKnown RBP13.48□□□□□ -0.25
TCTN3-202ENST00000371209 KCNQ4P56696 695 aa13.48□□□□□ -0.25
TCTN3-202ENST00000371209 ITPK1Q13572 414 aa13.48□□□□□ -0.25
TCTN3-202ENST00000371209 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
TCTN3-202ENST00000371209 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
TCTN3-202ENST00000371209 APBA3O96018 575 aa13.48□□□□□ -0.25
TCTN3-202ENST00000371209 EIF2S2P20042 333 aaKnown RBP13.48□□□□□ -0.25
TCTN3-202ENST00000371209 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
TCTN3-202ENST00000371209 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
TCTN3-202ENST00000371209 ATP6V1AP38606 617 aa13.47□□□□□ -0.25
TCTN3-202ENST00000371209 HDGFL1Q5TGJ6 251 aa13.47□□□□□ -0.25
TCTN3-202ENST00000371209 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
TCTN3-202ENST00000371209 BCL2L13Q9BXK5 485 aa13.47□□□□□ -0.25
TCTN3-202ENST00000371209 PLSCR1O15162 318 aa13.46□□□□□ -0.25
TCTN3-202ENST00000371209 BCAR3O75815 825 aa13.46□□□□□ -0.25
TCTN3-202ENST00000371209 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
TCTN3-202ENST00000371209 PROM2Q8N271 834 aa13.46□□□□□ -0.25
TCTN3-202ENST00000371209 ZNF428Q96B54 188 aa13.46□□□□□ -0.25
TCTN3-202ENST00000371209 CYP19A1P11511 503 aaPredicted RBP13.45□□□□□ -0.26
TCTN3-202ENST00000371209 ALDH1L2Q3SY69 923 aa13.45□□□□□ -0.26
TCTN3-202ENST00000371209 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
TCTN3-202ENST00000371209 ILDR2Q71H61 639 aa13.45□□□□□ -0.26
TCTN3-202ENST00000371209 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
TCTN3-202ENST00000371209 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
TCTN3-202ENST00000371209 CHPF2Q9P2E5 772 aa13.45□□□□□ -0.26
TCTN3-202ENST00000371209 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
TCTN3-202ENST00000371209 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
TCTN3-202ENST00000371209 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
TCTN3-202ENST00000371209 RREB1Q92766 1687 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 ANXA1P04083 346 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 A1BGP04217 495 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
TCTN3-202ENST00000371209 PDIA6Q15084 440 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 TXNRD1Q16881 649 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
TCTN3-202ENST00000371209 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
TCTN3-202ENST00000371209 SMC4Q9NTJ3 1288 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 TAF1LQ8IZX4 1826 aa13.44□□□□□ -0.26
TCTN3-202ENST00000371209 NBPF26B4DH59 902 aa13.43□□□□□ -0.26
TCTN3-202ENST00000371209 STARD3NLO95772 234 aa13.43□□□□□ -0.26
TCTN3-202ENST00000371209 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
TCTN3-202ENST00000371209 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
TCTN3-202ENST00000371209 NBPF15Q8N660 670 aa13.43□□□□□ -0.26
TCTN3-202ENST00000371209 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
TCTN3-202ENST00000371209 SLC27A3Q5K4L6 730 aa13.42□□□□□ -0.26
TCTN3-202ENST00000371209 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
TCTN3-202ENST00000371209 G2E3Q7L622 706 aa13.42□□□□□ -0.26
TCTN3-202ENST00000371209 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
TCTN3-202ENST00000371209 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
TCTN3-202ENST00000371209 CRKLP46109 303 aaKnown RBP13.42□□□□□ -0.26
TCTN3-202ENST00000371209 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
TCTN3-202ENST00000371209 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
TCTN3-202ENST00000371209 DDX21Q9NR30 783 aaKnown RBP eCLIP13.42□□□□□ -0.26
TCTN3-202ENST00000371209 DBF4Q9UBU7 674 aaPredicted RBP13.42□□□□□ -0.26
TCTN3-202ENST00000371209 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
TCTN3-202ENST00000371209 MYH14Q7Z406 1995 aaKnown RBP13.42□□□□□ -0.26
TCTN3-202ENST00000371209 C4BP0C0L5 1744 aa13.41□□□□□ -0.26
TCTN3-202ENST00000371209 MYL6BP14649 208 aa13.41□□□□□ -0.26
TCTN3-202ENST00000371209 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
TCTN3-202ENST00000371209 SF3B2Q13435 895 aaKnown RBP13.41□□□□□ -0.26
TCTN3-202ENST00000371209 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
TCTN3-202ENST00000371209 DEFB132Q7Z7B7 95 aa13.41□□□□□ -0.26
TCTN3-202ENST00000371209 CHMP4AQ9BY43 222 aa13.41□□□□□ -0.26
TCTN3-202ENST00000371209 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
TCTN3-202ENST00000371209 CCDC87Q9NVE4 849 aa13.41□□□□□ -0.26
TCTN3-202ENST00000371209 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
TCTN3-202ENST00000371209 CNTNAP4Q9C0A0 1308 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms