RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 LRRC8AQ8IWT6 810 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 ERO1AQ96HE7 468 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 LRRFIP2Q9Y608 721 aaKnown RBP11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 REREQ9P2R6 1566 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 CHMLP26374 656 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 MCM2P49736 904 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 PSEN1P49768 467 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 AK2P54819 239 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 ANKRD65E5RJM6 399 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 SLU7O95391 586 aaKnown RBP11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 GTF2A1P52655 376 aaPredicted RBP11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 BMS1Q14692 1282 aaKnown RBP11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
HMGCLL1-204ENST00000370852 COL3A1P02461 1466 aaPredicted RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 SKILP12757 684 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 COL9A3Q14050 684 aaPredicted RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 FILIP1Q7Z7B0 1213 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 CCDC83Q8IWF9 413 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 DACT1Q9NYF0 836 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 MTMR6Q9Y217 621 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 SASH3O75995 380 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 MAP3K11Q16584 847 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 ARHGAP29Q52LW3 1261 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 DHX37Q8IY37 1157 aaKnown RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 CCDC34Q96HJ3 373 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 EFCC1Q9HA90 598 aa11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
HMGCLL1-204ENST00000370852 MSH6P52701 1360 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 GJB2P29033 226 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 CCZ1BP86790 482 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 CCZ1P86791 482 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 FOXR1Q6PIV2 292 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 TSPYL1Q9H0U9 437 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 NUP62CLQ9H1M0 184 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 DRC1Q96MC2 740 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 KCNG1Q9UIX4 513 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 HDAC5Q9UQL6 1122 aa11.17□□□□□ -0.62
HMGCLL1-204ENST00000370852 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 ST3GAL1Q11201 340 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 ZSCAN26Q16670 478 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 GPATCH11Q8N954 259 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 SMC3Q9UQE7 1217 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 CCDC69A6NI79 296 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 ZRANB2O95218 330 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 SLFNL1Q499Z3 407 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 CCAR2Q8N163 923 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 TNMDQ9H2S6 317 aa11.16□□□□□ -0.62
HMGCLL1-204ENST00000370852 TRPM2O94759 1503 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 NR1I2O75469 434 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 MCCP23508 829 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 OAS2P29728 719 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 CASQ1P31415 396 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 ZNF165P49910 485 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 C11orf57Q6ZUT1 292 aaPredicted RBP11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 GEMIN8Q9NWZ8 242 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 CARMIL2Q6F5E8 1435 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 ARHGAP5Q13017 1502 aa11.15□□□□□ -0.62
HMGCLL1-204ENST00000370852 FANCGO15287 622 aa11.15□□□□□ -0.63
HMGCLL1-204ENST00000370852 ERCC4Q92889 916 aaPredicted RBP11.15□□□□□ -0.63
HMGCLL1-204ENST00000370852 TTC14Q96N46 770 aa11.15□□□□□ -0.63
HMGCLL1-204ENST00000370852 API5Q9BZZ5 524 aaKnown RBP11.15□□□□□ -0.63
HMGCLL1-204ENST00000370852 F6X3S4 739 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 ICE2Q659A1 982 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 TDRD7Q8NHU6 1098 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 FYB1O15117 783 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 E2F4Q16254 413 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 MUM1L1Q5H9M0 696 aa11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 RRP15Q9Y3B9 282 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-204ENST00000370852 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 MMP14P50281 582 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 YY1AP1Q9H869 796 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 CCDC171Q6TFL3 1326 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 AATKQ6ZMQ8 1374 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms