RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 CD2APQ9Y5K6 639 aa19.16■□□□□ 0.66
SSR4-203ENST00000370086 USP42Q9H9J4 1324 aaKnown RBP19.16■□□□□ 0.66
SSR4-203ENST00000370086 GOLGB1Q14789 3259 aaKnown RBP19.15■□□□□ 0.66
SSR4-203ENST00000370086 STARD3NLO95772 234 aa19.15■□□□□ 0.66
SSR4-203ENST00000370086 TAF7Q15545 349 aaPredicted RBP19.15■□□□□ 0.66
SSR4-203ENST00000370086 THUMPD2Q9BTF0 503 aaKnown RBP19.15■□□□□ 0.66
SSR4-203ENST00000370086 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.65
SSR4-203ENST00000370086 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
SSR4-203ENST00000370086 MIS18AQ9NYP9 233 aa19.14■□□□□ 0.65
SSR4-203ENST00000370086 COL15A1P39059 1388 aa19.14■□□□□ 0.65
SSR4-203ENST00000370086 CHD4Q14839 1912 aa19.13■□□□□ 0.65
SSR4-203ENST00000370086 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
SSR4-203ENST00000370086 FKBP8Q14318 412 aa19.13■□□□□ 0.65
SSR4-203ENST00000370086 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
SSR4-203ENST00000370086 KIAA1551Q9HCM1 1747 aa19.13■□□□□ 0.65
SSR4-203ENST00000370086 N4BP2Q86UW6 1770 aaPredicted RBP19.12■□□□□ 0.65
SSR4-203ENST00000370086 A1BGP04217 495 aa19.12■□□□□ 0.65
SSR4-203ENST00000370086 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
SSR4-203ENST00000370086 USPL1Q5W0Q7 1092 aa19.12■□□□□ 0.65
SSR4-203ENST00000370086 ADAMTS8Q9UP79 889 aa19.12■□□□□ 0.65
SSR4-203ENST00000370086 USP16Q9Y5T5 823 aa19.12■□□□□ 0.65
SSR4-203ENST00000370086 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
SSR4-203ENST00000370086 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
SSR4-203ENST00000370086 RIPK4P57078 832 aa19.11■□□□□ 0.65
SSR4-203ENST00000370086 GPR162Q16538 588 aa19.11■□□□□ 0.65
SSR4-203ENST00000370086 NARFQ9UHQ1 456 aa19.11■□□□□ 0.65
SSR4-203ENST00000370086 AFDNP55196 1824 aaKnown RBP19.11■□□□□ 0.65
SSR4-203ENST00000370086 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
SSR4-203ENST00000370086 ZPR1O75312 459 aa19.1■□□□□ 0.65
SSR4-203ENST00000370086 PELP1Q8IZL8 1130 aaKnown RBP19.1■□□□□ 0.65
SSR4-203ENST00000370086 SCN7AQ01118 1682 aa19.09■□□□□ 0.65
SSR4-203ENST00000370086 SNRPA1P09661 255 aaKnown RBP19.09■□□□□ 0.65
SSR4-203ENST00000370086 RUNDC1Q96C34 613 aa19.09■□□□□ 0.65
SSR4-203ENST00000370086 BCL2L12Q9HB09 334 aa19.09■□□□□ 0.65
SSR4-203ENST00000370086 RRP7AQ9Y3A4 280 aaKnown RBP19.09■□□□□ 0.65
SSR4-203ENST00000370086 PARP3Q9Y6F1 533 aa19.09■□□□□ 0.65
SSR4-203ENST00000370086 YBX3P16989 372 aaKnown RBP eCLIP19.08■□□□□ 0.644e-12■■■□□ 16.3
SSR4-203ENST00000370086 TM4SF1P30408 202 aa19.08■□□□□ 0.64
SSR4-203ENST00000370086 DDR1Q08345 913 aa19.08■□□□□ 0.64
SSR4-203ENST00000370086 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
SSR4-203ENST00000370086 C10orf71Q711Q0 1435 aa19.08■□□□□ 0.64
SSR4-203ENST00000370086 BCORQ6W2J9 1755 aa19.07■□□□□ 0.64
SSR4-203ENST00000370086 YY1P25490 414 aa19.07■□□□□ 0.64
SSR4-203ENST00000370086 IL6STP40189 918 aaPredicted RBP19.07■□□□□ 0.64
SSR4-203ENST00000370086 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
SSR4-203ENST00000370086 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
SSR4-203ENST00000370086 NRXN2Q9P2S2 1712 aa19.06■□□□□ 0.64
SSR4-203ENST00000370086 POLRMTO00411 1230 aaKnown RBP19.06■□□□□ 0.64
SSR4-203ENST00000370086 NEUROD2Q15784 382 aa19.06■□□□□ 0.64
SSR4-203ENST00000370086 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
SSR4-203ENST00000370086 BRCA1P38398 1863 aaKnown RBP19.05■□□□□ 0.64
SSR4-203ENST00000370086 PXDNLA1KZ92 1463 aa19.05■□□□□ 0.64
SSR4-203ENST00000370086 A0A087WZG4 1122 aa19.05■□□□□ 0.64
SSR4-203ENST00000370086 EIF4A1P60842 406 aaKnown RBP19.05■□□□□ 0.64
SSR4-203ENST00000370086 NFIXQ14938 502 aa19.05■□□□□ 0.64
SSR4-203ENST00000370086 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
SSR4-203ENST00000370086 LMOD3Q0VAK6 560 aa19.04■□□□□ 0.64
SSR4-203ENST00000370086 WWC3Q9ULE0 1092 aa19.04■□□□□ 0.64
SSR4-203ENST00000370086 TRIM35Q9UPQ4 493 aa19.04■□□□□ 0.64
SSR4-203ENST00000370086 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
SSR4-203ENST00000370086 NBPF26B4DH59 902 aa19.02■□□□□ 0.64
SSR4-203ENST00000370086 TGFB2P61812 414 aa19.02■□□□□ 0.64
SSR4-203ENST00000370086 NBPF10Q6P3W6 841 aaKnown RBP19.02■□□□□ 0.64
SSR4-203ENST00000370086 NBPF15Q8N660 670 aa19.02■□□□□ 0.64
SSR4-203ENST00000370086 TSPYL4Q9UJ04 414 aa19.02■□□□□ 0.64
SSR4-203ENST00000370086 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
SSR4-203ENST00000370086 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
SSR4-203ENST00000370086 TBC1D9BQ66K14 1250 aa19.01■□□□□ 0.63
SSR4-203ENST00000370086 GRIN3BO60391 1043 aa19■□□□□ 0.63
SSR4-203ENST00000370086 BICDL1Q6ZP65 573 aa19■□□□□ 0.63
SSR4-203ENST00000370086 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
SSR4-203ENST00000370086 ANP32CO43423 234 aa18.99■□□□□ 0.63
SSR4-203ENST00000370086 SERPINB2P05120 415 aa18.99■□□□□ 0.63
SSR4-203ENST00000370086 DPEP1P16444 411 aa18.99■□□□□ 0.63
SSR4-203ENST00000370086 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
SSR4-203ENST00000370086 BABAM1Q9NWV8 329 aa18.99■□□□□ 0.63
SSR4-203ENST00000370086 APAF1O14727 1248 aa18.98■□□□□ 0.63
SSR4-203ENST00000370086 KCNA3P22001 575 aa18.98■□□□□ 0.63
SSR4-203ENST00000370086 ANKRD31Q8N7Z5 1873 aa18.98■□□□□ 0.63
SSR4-203ENST00000370086 DLEC1Q9Y238 1755 aa18.97■□□□□ 0.63
SSR4-203ENST00000370086 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
SSR4-203ENST00000370086 NUP98P52948 1817 aa18.96■□□□□ 0.63
SSR4-203ENST00000370086 CHL1O00533 1208 aa18.96■□□□□ 0.63
SSR4-203ENST00000370086 CARMIL3Q8ND23 1372 aa18.95■□□□□ 0.62
SSR4-203ENST00000370086 CHRNA5P30532 468 aa18.95■□□□□ 0.62
SSR4-203ENST00000370086 LAS1LQ9Y4W2 734 aaKnown RBP18.95■□□□□ 0.62
SSR4-203ENST00000370086 BCS1LQ9Y276 419 aa18.94■□□□□ 0.62
SSR4-203ENST00000370086 MYL6BP14649 208 aa18.93■□□□□ 0.62
SSR4-203ENST00000370086 KRT24Q2M2I5 525 aa18.93■□□□□ 0.62
SSR4-203ENST00000370086 NGEFQ8N5V2 710 aa18.93■□□□□ 0.62
SSR4-203ENST00000370086 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
SSR4-203ENST00000370086 EIF2S2P20042 333 aaKnown RBP18.92■□□□□ 0.62
SSR4-203ENST00000370086 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
SSR4-203ENST00000370086 SETDB2Q96T68 719 aa18.92■□□□□ 0.62
SSR4-203ENST00000370086 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
SSR4-203ENST00000370086 PDIA6Q15084 440 aa18.91■□□□□ 0.62
SSR4-203ENST00000370086 HLFQ16534 295 aa18.91■□□□□ 0.62
SSR4-203ENST00000370086 PRR5LQ6MZQ0 368 aa18.91■□□□□ 0.62
SSR4-203ENST00000370086 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
SSR4-203ENST00000370086 CCDC24Q8N4L8 307 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms