RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CRKLP46109 303 aaKnown RBP20.12■□□□□ 0.81
PRPF38B-202ENST00000370022 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
PRPF38B-202ENST00000370022 ANO8Q9HCE9 1232 aaPredicted RBP20.12■□□□□ 0.81
PRPF38B-202ENST00000370022 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
PRPF38B-202ENST00000370022 CCDC87Q9NVE4 849 aa20.11■□□□□ 0.81
PRPF38B-202ENST00000370022 PRAMEF22A3QJZ6 481 aa20.1■□□□□ 0.81
PRPF38B-202ENST00000370022 ZNF827Q17R98 1081 aa20.1■□□□□ 0.81
PRPF38B-202ENST00000370022 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
PRPF38B-202ENST00000370022 LAMB4A4D0S4 1761 aa20.1■□□□□ 0.81
PRPF38B-202ENST00000370022 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
PRPF38B-202ENST00000370022 INTS5Q6P9B9 1019 aaKnown RBP20.09■□□□□ 0.81
PRPF38B-202ENST00000370022 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
PRPF38B-202ENST00000370022 GNPATO15228 680 aa20.08■□□□□ 0.81
PRPF38B-202ENST00000370022 KRT24Q2M2I5 525 aa20.08■□□□□ 0.81
PRPF38B-202ENST00000370022 FLAD1Q8NFF5 587 aa20.08■□□□□ 0.81
PRPF38B-202ENST00000370022 CDCA7LQ96GN5 454 aa20.08■□□□□ 0.81
PRPF38B-202ENST00000370022 ERBB4Q15303 1308 aa20.08■□□□□ 0.81
PRPF38B-202ENST00000370022 RPS6KA4O75676 772 aa20.08■□□□□ 0.8
PRPF38B-202ENST00000370022 SSFA2P28290 1259 aa20.08■□□□□ 0.8
PRPF38B-202ENST00000370022 C8orf58Q8NAV2 365 aa20.08■□□□□ 0.8
PRPF38B-202ENST00000370022 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.8
PRPF38B-202ENST00000370022 ADRA2BP18089 450 aa20.07■□□□□ 0.8
PRPF38B-202ENST00000370022 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
PRPF38B-202ENST00000370022 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
PRPF38B-202ENST00000370022 ZBTB1Q9Y2K1 713 aa20.06■□□□□ 0.8
PRPF38B-202ENST00000370022 ELL2O00472 640 aaPredicted RBP20.05■□□□□ 0.8
PRPF38B-202ENST00000370022 A1BGP04217 495 aa20.05■□□□□ 0.8
PRPF38B-202ENST00000370022 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
PRPF38B-202ENST00000370022 IL6STP40189 918 aaPredicted RBP20.05■□□□□ 0.8
PRPF38B-202ENST00000370022 HDGFL1Q5TGJ6 251 aa20.05■□□□□ 0.8
PRPF38B-202ENST00000370022 QSER1Q2KHR3 1735 aa20.05■□□□□ 0.8
PRPF38B-202ENST00000370022 TSPYL6Q8N831 410 aa20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 SRCAPQ6ZRS2 3230 aa20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 UBR3Q6ZT12 1888 aa20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 MYH14Q7Z406 1995 aaKnown RBP20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 R3HDM1Q15032 1099 aaKnown RBP20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 TRAPPC3LQ5T215 181 aa20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 NPM2Q86SE8 214 aaKnown RBP20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 PNPLA7Q6ZV29 1317 aa20.04■□□□□ 0.8
PRPF38B-202ENST00000370022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
PRPF38B-202ENST00000370022 EIF5P55010 431 aaKnown RBP20.03■□□□□ 0.8
PRPF38B-202ENST00000370022 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
PRPF38B-202ENST00000370022 A0A087WZG4 1122 aa20.02■□□□□ 0.8
PRPF38B-202ENST00000370022 VAMP4O75379 141 aa20.02■□□□□ 0.8
PRPF38B-202ENST00000370022 DBF4Q9UBU7 674 aaPredicted RBP20.02■□□□□ 0.8
PRPF38B-202ENST00000370022 NBPF26B4DH59 902 aa20.01■□□□□ 0.79
PRPF38B-202ENST00000370022 PHF14O94880 888 aa20.01■□□□□ 0.79
PRPF38B-202ENST00000370022 CT47B1P0C2W7 299 aaPredicted RBP20.01■□□□□ 0.79
PRPF38B-202ENST00000370022 NBPF10Q6P3W6 841 aaKnown RBP20.01■□□□□ 0.79
PRPF38B-202ENST00000370022 NBPF15Q8N660 670 aa20.01■□□□□ 0.79
PRPF38B-202ENST00000370022 DDX21Q9NR30 783 aaKnown RBP eCLIP20.01■□□□□ 0.79
PRPF38B-202ENST00000370022 COL15A1P39059 1388 aa20■□□□□ 0.79
PRPF38B-202ENST00000370022 AMIGO3Q86WK7 504 aa20■□□□□ 0.79
PRPF38B-202ENST00000370022 ZNF428Q96B54 188 aa20■□□□□ 0.79
PRPF38B-202ENST00000370022 TUBGCP6Q96RT7 1819 aa20■□□□□ 0.79
PRPF38B-202ENST00000370022 PDIA6Q15084 440 aa20■□□□□ 0.79
PRPF38B-202ENST00000370022 COL23A1Q86Y22 540 aaPredicted RBP20■□□□□ 0.79
PRPF38B-202ENST00000370022 NECTIN2Q92692 538 aa20■□□□□ 0.79
PRPF38B-202ENST00000370022 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
PRPF38B-202ENST00000370022 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
PRPF38B-202ENST00000370022 PSDA5PKW4 1024 aaPredicted RBP19.99■□□□□ 0.79
PRPF38B-202ENST00000370022 RFC4P35249 363 aa19.99■□□□□ 0.79
PRPF38B-202ENST00000370022 SLC16A10Q8TF71 515 aa19.99■□□□□ 0.79
PRPF38B-202ENST00000370022 STK31Q9BXU1 1019 aa19.99■□□□□ 0.79
PRPF38B-202ENST00000370022 CHPF2Q9P2E5 772 aa19.99■□□□□ 0.79
PRPF38B-202ENST00000370022 MYL6BP14649 208 aa19.98■□□□□ 0.79
PRPF38B-202ENST00000370022 PIP4K2AP48426 406 aaPredicted RBP19.98■□□□□ 0.79
PRPF38B-202ENST00000370022 HYPKQ9NX55 129 aa19.98■□□□□ 0.79
PRPF38B-202ENST00000370022 ZNF330Q9Y3S2 320 aaPredicted RBP19.98■□□□□ 0.79
PRPF38B-202ENST00000370022 MSH5O43196 834 aa19.97■□□□□ 0.79
PRPF38B-202ENST00000370022 LRP10Q7Z4F1 713 aa19.96■□□□□ 0.79
PRPF38B-202ENST00000370022 USP42Q9H9J4 1324 aaKnown RBP19.96■□□□□ 0.79
PRPF38B-202ENST00000370022 ZPR1O75312 459 aa19.95■□□□□ 0.78
PRPF38B-202ENST00000370022 SMIM5Q71RC9 77 aa19.95■□□□□ 0.78
PRPF38B-202ENST00000370022 NARFQ9UHQ1 456 aa19.95■□□□□ 0.78
PRPF38B-202ENST00000370022 CASZ1Q86V15 1759 aa19.95■□□□□ 0.78
PRPF38B-202ENST00000370022 RGL2O15211 777 aa19.95■□□□□ 0.78
PRPF38B-202ENST00000370022 PROSER3Q2NL68 480 aa19.95■□□□□ 0.78
PRPF38B-202ENST00000370022 DZIP3Q86Y13 1208 aaKnown RBP19.95■□□□□ 0.78
PRPF38B-202ENST00000370022 C4AP0C0L4 1744 aa19.94■□□□□ 0.78
PRPF38B-202ENST00000370022 KIF6Q6ZMV9 814 aa19.93■□□□□ 0.78
PRPF38B-202ENST00000370022 PDGFDQ9GZP0 370 aaPredicted RBP19.93■□□□□ 0.78
PRPF38B-202ENST00000370022 ANXA1P04083 346 aa19.92■□□□□ 0.78
PRPF38B-202ENST00000370022 SLC4A2P04920 1241 aa19.92■□□□□ 0.78
PRPF38B-202ENST00000370022 ALDH1L2Q3SY69 923 aa19.92■□□□□ 0.78
PRPF38B-202ENST00000370022 ARXQ96QS3 562 aa19.92■□□□□ 0.78
PRPF38B-202ENST00000370022 MTFR1LQ9H019 292 aa19.92■□□□□ 0.78
PRPF38B-202ENST00000370022 TBC1D2BQ9UPU7 963 aa19.92■□□□□ 0.78
PRPF38B-202ENST00000370022 ERVV-1B6SEH8 477 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 COPS6Q7L5N1 327 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 NLGN1Q8N2Q7 840 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 CAMTA2O94983 1202 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 GYS1P13807 737 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 USPL1Q5W0Q7 1092 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 CLEC4GQ6UXB4 293 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 XAGE3Q8WTP9 111 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
PRPF38B-202ENST00000370022 MAP3K15Q6ZN16 1313 aa19.9■□□□□ 0.78
PRPF38B-202ENST00000370022 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms