RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CFAP70Q5T0N1 1121 aa14.39□□□□□ -0.11
HCFC1-202ENST00000369984 SRRTQ9BXP5 876 aaKnown RBP14.39□□□□□ -0.11
HCFC1-202ENST00000369984 MKNK2Q9HBH9 465 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 KIF1BPQ96EK5 621 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 EXOC6BQ9Y2D4 811 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 TMEM266Q2M3C6 531 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 CKAP2LQ8IYA6 745 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
HCFC1-202ENST00000369984 SCLT1Q96NL6 688 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 TMCO5BA8MYB1 307 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 STX1AQ16623 288 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 METTL24Q5JXM2 366 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
HCFC1-202ENST00000369984 PRPF4BQ13523 1007 aaKnown RBP14.38□□□□□ -0.11
HCFC1-202ENST00000369984 PRPF40BQ6NWY9 871 aaKnown RBP14.38□□□□□ -0.11
HCFC1-202ENST00000369984 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
HCFC1-202ENST00000369984 AKAP2Q9Y2D5 859 aa14.38□□□□□ -0.11
HCFC1-202ENST00000369984 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 LMAN1P49257 510 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 MAATS1Q7Z4T9 603 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 FSD2A1L4K1 749 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 NEMFO60524 1076 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 SSRP1Q08945 709 aaKnown RBP14.37□□□□□ -0.11
HCFC1-202ENST00000369984 TMC6Q7Z403 805 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 FERMT2Q96AC1 680 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 NAPBQ9H115 298 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 JADE2Q9NQC1 790 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 NKTRP30414 1462 aaKnown RBP14.37□□□□□ -0.11
HCFC1-202ENST00000369984 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 HMGB1P09429 215 aaKnown RBP14.37□□□□□ -0.11
HCFC1-202ENST00000369984 MX1P20591 662 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 SNW1Q13573 536 aaKnown RBP14.37□□□□□ -0.11
HCFC1-202ENST00000369984 SLC12A7Q9Y666 1083 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 COMMD10Q9Y6G5 202 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 ADCY5O95622 1261 aa14.37□□□□□ -0.11
HCFC1-202ENST00000369984 POLR3DP05423 398 aaPredicted RBP14.37□□□□□ -0.11
HCFC1-202ENST00000369984 SEPT6Q14141 434 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 PLEKHH2Q8IVE3 1493 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 C6orf163Q5TEZ5 329 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
HCFC1-202ENST00000369984 GLRX3O76003 335 aaKnown RBP14.36□□□□□ -0.11
HCFC1-202ENST00000369984 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 CABP1Q9NZU7 370 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 CEP135Q66GS9 1140 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 USP25Q9UHP3 1055 aa14.36□□□□□ -0.11
HCFC1-202ENST00000369984 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 RRS1Q15050 365 aaKnown RBP14.35□□□□□ -0.11
HCFC1-202ENST00000369984 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
HCFC1-202ENST00000369984 FAM69CQ0P6D2 419 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 A0A087WZG4 1122 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 FERP16591 822 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 GOLGA6L9A6NEM1 432 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 SMARCA5O60264 1052 aaPredicted RBP14.35□□□□□ -0.11
HCFC1-202ENST00000369984 HSF2BPO75031 334 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 PSMD1Q99460 953 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 HMGB2P26583 209 aaKnown RBP14.35□□□□□ -0.11
HCFC1-202ENST00000369984 MTIF2P46199 727 aaKnown RBP14.35□□□□□ -0.11
HCFC1-202ENST00000369984 TXNDC2Q86VQ3 553 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 BOLA2Q9H3K6 86 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 CETN1Q12798 172 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 CAVIN4Q5BKX8 364 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 ANKRD30BQ9BXX2 1392 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 CEP112Q8N8E3 955 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 DNAAF4Q8WXU2 420 aa14.35□□□□□ -0.11
HCFC1-202ENST00000369984 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
HCFC1-202ENST00000369984 CTCFLQ8NI51 663 aaPredicted RBP14.34□□□□□ -0.11
HCFC1-202ENST00000369984 CUL5Q93034 780 aa14.34□□□□□ -0.11
HCFC1-202ENST00000369984 PAXBP1Q9Y5B6 917 aa14.34□□□□□ -0.11
HCFC1-202ENST00000369984 IKBKGQ9Y6K9 419 aa14.34□□□□□ -0.11
HCFC1-202ENST00000369984 CCDC82Q8N4S0 544 aa14.34□□□□□ -0.11
HCFC1-202ENST00000369984 CRACR2BQ8N4Y2 399 aaPredicted RBP14.34□□□□□ -0.11
HCFC1-202ENST00000369984 FSIP1Q8NA03 581 aa14.34□□□□□ -0.11
HCFC1-202ENST00000369984 TMEM87AQ8NBN3 555 aa14.34□□□□□ -0.11
HCFC1-202ENST00000369984 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.34□□□□□ -0.11
HCFC1-202ENST00000369984 V9GYY5 206 aaPredicted RBP14.34□□□□□ -0.11
HCFC1-202ENST00000369984 A0A1W2PRG0 241 aa14.33□□□□□ -0.11
HCFC1-202ENST00000369984 ANKIB1Q9P2G1 1089 aa14.33□□□□□ -0.11
HCFC1-202ENST00000369984 RTEL1-TNFRSF6BF6WH68 1400 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 PABPN1LA6NDY0 278 aaKnown RBP14.33□□□□□ -0.12
HCFC1-202ENST00000369984 GOLGA8BA8MQT2 603 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 IQCA1Q86XH1 822 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 ZNF213O14771 459 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 TMOD2Q9NZR1 351 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 DYNC1I1O14576 645 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 BICDL1Q6ZP65 573 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 PPP1R14CQ8TAE6 165 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 RANBP6O60518 1105 aaKnown RBP14.33□□□□□ -0.12
HCFC1-202ENST00000369984 NAP1L3Q99457 506 aaPredicted RBP14.33□□□□□ -0.12
HCFC1-202ENST00000369984 CFTRP13569 1480 aa14.33□□□□□ -0.12
HCFC1-202ENST00000369984 STARD3NLO95772 234 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 FAM114A1Q8IWE2 563 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 TNPO1Q92973 898 aaKnown RBP14.32□□□□□ -0.12
HCFC1-202ENST00000369984 TSNARE1Q96NA8 513 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 BIN1O00499 593 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 CCT2P78371 535 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms