RNA–Protein interactions for RNA: ENST00000368463.7

PBXIP1-202, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBXIP1, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-202ENST00000368463 PDCL2Q8N4E4 241 aa17.26■□□□□ 0.35
PBXIP1-202ENST00000368463 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
PBXIP1-202ENST00000368463 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
PBXIP1-202ENST00000368463 TRIM5Q9C035 493 aa17.26■□□□□ 0.35
PBXIP1-202ENST00000368463 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
PBXIP1-202ENST00000368463 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
PBXIP1-202ENST00000368463 KDM4AO75164 1064 aa17.25■□□□□ 0.35
PBXIP1-202ENST00000368463 AIMP1Q12904 312 aaKnown RBP17.25■□□□□ 0.35
PBXIP1-202ENST00000368463 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
PBXIP1-202ENST00000368463 CCDC186Q7Z3E2 898 aa17.25■□□□□ 0.35
PBXIP1-202ENST00000368463 PUS7Q96PZ0 661 aaKnown RBP17.25■□□□□ 0.35
PBXIP1-202ENST00000368463 MCM2P49736 904 aa17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 PTPRCP08575 1304 aa17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 ACEP12821 1306 aa17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 LIG1P18858 919 aa17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 CUL4AQ13619 759 aa17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 USP44Q9H0E7 712 aa17.24■□□□□ 0.35
PBXIP1-202ENST00000368463 F13A1P00488 732 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 GNAI3P08754 354 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 CCDC8Q9H0W5 538 aaPredicted RBP17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 ARHGEF40Q8TER5 1519 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 SOS1Q07889 1333 aaPredicted RBP17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 KCNF1Q9H3M0 494 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 PDRG1Q9NUG6 133 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 RHPN1Q8TCX5 695 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 TRMT1Q9NXH9 659 aaKnown RBP17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 LIMCH1Q9UPQ0 1083 aa17.23■□□□□ 0.35
PBXIP1-202ENST00000368463 MCM5P33992 734 aa17.22■□□□□ 0.35
PBXIP1-202ENST00000368463 HAP1P54257 671 aaPredicted RBP17.22■□□□□ 0.35
PBXIP1-202ENST00000368463 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
PBXIP1-202ENST00000368463 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
PBXIP1-202ENST00000368463 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 UBE2HP62256 183 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 ZNF771Q7L3S4 317 aaPredicted RBP17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 EYA1Q99502 592 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 VWDEQ8N2E2 1590 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
PBXIP1-202ENST00000368463 RGS12O14924 1447 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 KCNQ3O43525 872 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 CHGBP05060 677 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 NLRP6P59044 892 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 ARID5BQ14865 1188 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 FILIP1Q7Z7B0 1213 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 FAM227BQ96M60 508 aa17.21■□□□□ 0.34
PBXIP1-202ENST00000368463 PTPRMP28827 1452 aa17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 SETBP1Q9Y6X0 1596 aa17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 HSPA4P34932 840 aa17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 FGD1P98174 961 aa17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 INO80Q9ULG1 1556 aaPredicted RBP17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 ZFYVE9O95405 1425 aa17.2■□□□□ 0.34
PBXIP1-202ENST00000368463 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 ME3Q16798 604 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 METP08581 1390 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 RPAP1Q9BWH6 1393 aaPredicted RBP17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 TRERF1Q96PN7 1200 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 DNAJC25Q9H1X3 360 aa17.19■□□□□ 0.34
PBXIP1-202ENST00000368463 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 ZSCAN20P17040 1043 aaPredicted RBP17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 INTS4Q96HW7 963 aaKnown RBP17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 TNMDQ9H2S6 317 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 HSP90B1P14625 803 aaKnown RBP17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 TERF1P54274 439 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 GUCY1B3Q02153 619 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 TTC6Q86TZ1 520 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 MYO3AQ8NEV4 1616 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 PPLO60437 1756 aa17.18■□□□□ 0.34
PBXIP1-202ENST00000368463 SGSM2O43147 1006 aa17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 IFIT2P09913 472 aaKnown RBP17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 CCDC192P0DO97 292 aa17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 HMGN5P82970 282 aaKnown RBP17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 CWF19L2Q2TBE0 894 aaKnown RBP17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 ZBTB22O15209 634 aa17.17■□□□□ 0.34
PBXIP1-202ENST00000368463 AACSQ86V21 672 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms