RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 DNAJC10Q8IXB1 793 aa16.44■□□□□ 0.22
EFNA1-201ENST00000368406 IFT57Q9NWB7 429 aa16.44■□□□□ 0.22
EFNA1-201ENST00000368406 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
EFNA1-201ENST00000368406 RTCBQ9Y3I0 505 aaKnown RBP16.44■□□□□ 0.22
EFNA1-201ENST00000368406 IL16Q14005 1332 aa16.44■□□□□ 0.22
EFNA1-201ENST00000368406 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
EFNA1-201ENST00000368406 TJP1Q07157 1748 aa16.43■□□□□ 0.22
EFNA1-201ENST00000368406 MYH14Q7Z406 1995 aaKnown RBP16.43■□□□□ 0.22
EFNA1-201ENST00000368406 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
EFNA1-201ENST00000368406 CYP19A1P11511 503 aaPredicted RBP16.43■□□□□ 0.22
EFNA1-201ENST00000368406 PTGER2P43116 358 aa16.43■□□□□ 0.22
EFNA1-201ENST00000368406 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
EFNA1-201ENST00000368406 SGIP1Q9BQI5 828 aa16.43■□□□□ 0.22
EFNA1-201ENST00000368406 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
EFNA1-201ENST00000368406 MSH5O43196 834 aa16.42■□□□□ 0.22
EFNA1-201ENST00000368406 KCNQ3O43525 872 aa16.42■□□□□ 0.22
EFNA1-201ENST00000368406 STARD3NLO95772 234 aa16.42■□□□□ 0.22
EFNA1-201ENST00000368406 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
EFNA1-201ENST00000368406 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
EFNA1-201ENST00000368406 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
EFNA1-201ENST00000368406 ZNF521Q96K83 1311 aa16.41■□□□□ 0.22
EFNA1-201ENST00000368406 PHF14O94880 888 aa16.41■□□□□ 0.22
EFNA1-201ENST00000368406 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
EFNA1-201ENST00000368406 COL24A1Q17RW2 1714 aa16.4■□□□□ 0.22
EFNA1-201ENST00000368406 E9PSI1 815 aa16.4■□□□□ 0.22
EFNA1-201ENST00000368406 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
EFNA1-201ENST00000368406 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
EFNA1-201ENST00000368406 CHL1O00533 1208 aa16.39■□□□□ 0.21
EFNA1-201ENST00000368406 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
EFNA1-201ENST00000368406 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
EFNA1-201ENST00000368406 POLD1P28340 1107 aa16.38■□□□□ 0.21
EFNA1-201ENST00000368406 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
EFNA1-201ENST00000368406 ARHGEF1Q92888 912 aaKnown RBP16.38■□□□□ 0.21
EFNA1-201ENST00000368406 PPP1R1BQ9UD71 204 aaPredicted RBP16.38■□□□□ 0.21
EFNA1-201ENST00000368406 RFC4P35249 363 aa16.37■□□□□ 0.21
EFNA1-201ENST00000368406 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
EFNA1-201ENST00000368406 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
EFNA1-201ENST00000368406 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
EFNA1-201ENST00000368406 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
EFNA1-201ENST00000368406 ARXQ96QS3 562 aa16.36■□□□□ 0.21
EFNA1-201ENST00000368406 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
EFNA1-201ENST00000368406 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
EFNA1-201ENST00000368406 ZBTB1Q9Y2K1 713 aa16.36■□□□□ 0.21
EFNA1-201ENST00000368406 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
EFNA1-201ENST00000368406 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
EFNA1-201ENST00000368406 USP16Q9Y5T5 823 aa16.35■□□□□ 0.21
EFNA1-201ENST00000368406 EIF5P55010 431 aaKnown RBP16.34■□□□□ 0.21
EFNA1-201ENST00000368406 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
EFNA1-201ENST00000368406 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
EFNA1-201ENST00000368406 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
EFNA1-201ENST00000368406 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
EFNA1-201ENST00000368406 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
EFNA1-201ENST00000368406 A0A087WZG4 1122 aa16.32■□□□□ 0.2
EFNA1-201ENST00000368406 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
EFNA1-201ENST00000368406 ELL2O00472 640 aaPredicted RBP16.32■□□□□ 0.2
EFNA1-201ENST00000368406 A1BGP04217 495 aa16.32■□□□□ 0.2
EFNA1-201ENST00000368406 GYS1P13807 737 aa16.32■□□□□ 0.2
EFNA1-201ENST00000368406 EXOSC9Q06265 439 aaKnown RBP16.32■□□□□ 0.2
EFNA1-201ENST00000368406 COL15A1P39059 1388 aa16.32■□□□□ 0.2
EFNA1-201ENST00000368406 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
EFNA1-201ENST00000368406 ZPR1O75312 459 aa16.31■□□□□ 0.2
EFNA1-201ENST00000368406 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
EFNA1-201ENST00000368406 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
EFNA1-201ENST00000368406 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
EFNA1-201ENST00000368406 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
EFNA1-201ENST00000368406 FHDC1Q9C0D6 1143 aaPredicted RBP16.3■□□□□ 0.2
EFNA1-201ENST00000368406 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
EFNA1-201ENST00000368406 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
EFNA1-201ENST00000368406 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
EFNA1-201ENST00000368406 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
EFNA1-201ENST00000368406 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
EFNA1-201ENST00000368406 SRP68Q9UHB9 627 aaKnown RBP16.29■□□□□ 0.2
EFNA1-201ENST00000368406 MMP10P09238 476 aa16.28■□□□□ 0.2
EFNA1-201ENST00000368406 HOXB7P09629 217 aa16.28■□□□□ 0.2
EFNA1-201ENST00000368406 HDGFL1Q5TGJ6 251 aa16.28■□□□□ 0.2
EFNA1-201ENST00000368406 CHMP4AQ9BY43 222 aa16.28■□□□□ 0.2
EFNA1-201ENST00000368406 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
EFNA1-201ENST00000368406 USPL1Q5W0Q7 1092 aa16.28■□□□□ 0.2
EFNA1-201ENST00000368406 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
EFNA1-201ENST00000368406 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
EFNA1-201ENST00000368406 ERBB4Q15303 1308 aa16.27■□□□□ 0.2
EFNA1-201ENST00000368406 FKBP8Q14318 412 aa16.27■□□□□ 0.19
EFNA1-201ENST00000368406 TRMT2AQ8IZ69 625 aaKnown RBP16.27■□□□□ 0.19
EFNA1-201ENST00000368406 TSPYL6Q8N831 410 aa16.27■□□□□ 0.19
EFNA1-201ENST00000368406 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.19
EFNA1-201ENST00000368406 RGL2O15211 777 aa16.26■□□□□ 0.19
EFNA1-201ENST00000368406 TM4SF1P30408 202 aa16.26■□□□□ 0.19
EFNA1-201ENST00000368406 STK31Q9BXU1 1019 aa16.26■□□□□ 0.19
EFNA1-201ENST00000368406 ZNF330Q9Y3S2 320 aaPredicted RBP16.26■□□□□ 0.19
EFNA1-201ENST00000368406 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
EFNA1-201ENST00000368406 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
EFNA1-201ENST00000368406 BCL2L12Q9HB09 334 aa16.25■□□□□ 0.19
EFNA1-201ENST00000368406 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
EFNA1-201ENST00000368406 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
EFNA1-201ENST00000368406 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
EFNA1-201ENST00000368406 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
EFNA1-201ENST00000368406 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
EFNA1-201ENST00000368406 CT47B1P0C2W7 299 aaPredicted RBP16.23■□□□□ 0.19
EFNA1-201ENST00000368406 MYL6BP14649 208 aa16.23■□□□□ 0.19
EFNA1-201ENST00000368406 CLEC4GQ6UXB4 293 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms