RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 PI4KAP1Q8N8J0 262 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 PTPRCP08575 1304 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 GJB2P29033 226 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 TRIM5Q9C035 493 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 PDRG1Q9NUG6 133 aa13.21□□□□□ -0.29
NECTIN4-201ENST00000368012 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.29
NECTIN4-201ENST00000368012 TTC21BQ7Z4L5 1316 aa13.21□□□□□ -0.29
NECTIN4-201ENST00000368012 EYA1Q99502 592 aa13.21□□□□□ -0.29
NECTIN4-201ENST00000368012 IL25Q9H293 177 aa13.21□□□□□ -0.29
NECTIN4-201ENST00000368012 BOLA2Q9H3K6 86 aa13.21□□□□□ -0.29
NECTIN4-201ENST00000368012 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.29
NECTIN4-201ENST00000368012 PIK3R4Q99570 1358 aa13.21□□□□□ -0.3
NECTIN4-201ENST00000368012 SYT1P21579 422 aa13.21□□□□□ -0.3
NECTIN4-201ENST00000368012 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.3
NECTIN4-201ENST00000368012 AACSQ86V21 672 aa13.21□□□□□ -0.3
NECTIN4-201ENST00000368012 ATP6V1DQ9Y5K8 247 aa13.21□□□□□ -0.3
NECTIN4-201ENST00000368012 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.3
NECTIN4-201ENST00000368012 BRD1O95696 1058 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 H3BQV1 296 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 MPRIPQ6WCQ1 1025 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
NECTIN4-201ENST00000368012 CCDC183Q5T5S1 534 aa13.19□□□□□ -0.3
NECTIN4-201ENST00000368012 PRDM4Q9UKN5 801 aa13.19□□□□□ -0.3
NECTIN4-201ENST00000368012 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
NECTIN4-201ENST00000368012 C16orf45Q96MC5 204 aaPredicted RBP13.19□□□□□ -0.3
NECTIN4-201ENST00000368012 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
NECTIN4-201ENST00000368012 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
NECTIN4-201ENST00000368012 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 PIP4K2AP48426 406 aaPredicted RBP13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 LRRC2Q9BYS8 371 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 CYP2E1P05181 493 aaPredicted RBP13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 ZSCAN22P10073 491 aaPredicted RBP13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 MYL6BP14649 208 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 CHPF2Q9P2E5 772 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
NECTIN4-201ENST00000368012 RAB11FIP3O75154 756 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 RUFY2Q8WXA3 655 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 TSPOAP1O95153 1857 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 KLHDC4Q8TBB5 520 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 PIK3C2BO00750 1634 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 FAM184AQ8NB25 1140 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
NECTIN4-201ENST00000368012 GUCY1B3Q02153 619 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 KIF3AQ9Y496 699 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 METP08581 1390 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 KCNQ3O43525 872 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 LARGE1O95461 756 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
NECTIN4-201ENST00000368012 ZBTB9Q96C00 473 aa13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 BECN2A8MW95 431 aa13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 GOLGA6L19H0YKK7 550 aa13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 STK11IPQ8N1F8 1099 aa13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
NECTIN4-201ENST00000368012 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.31
NECTIN4-201ENST00000368012 A0A0G2JS52 829 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 F13A1P00488 732 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 PTGS1P23219 599 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 PTH1RQ03431 593 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 EDC3Q96F86 508 aaKnown RBP13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 MAP7D2Q96T17 732 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 A0A087WWV3 80 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 NEUROD6Q96NK8 337 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 NUP62CLQ9H1M0 184 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 UBE2HP62256 183 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 SPATA32Q96LK8 384 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms