RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 NLRP8Q86W28 1048 aa8.33□□□□□ -1.08
XCL1-201ENST00000367818 PROCA1Q8NCQ7 364 aaPredicted RBP8.33□□□□□ -1.08
XCL1-201ENST00000367818 DCDC2BA2VCK2 349 aa8.32□□□□□ -1.08
XCL1-201ENST00000367818 ATXN7O15265 892 aaPredicted RBP8.32□□□□□ -1.08
XCL1-201ENST00000367818 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
XCL1-201ENST00000367818 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
XCL1-201ENST00000367818 TRIM34Q9BYJ4 488 aa8.32□□□□□ -1.08
XCL1-201ENST00000367818 MAPTP10636 758 aaKnown RBP8.31□□□□□ -1.08
XCL1-201ENST00000367818 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
XCL1-201ENST00000367818 HCN2Q9UL51 889 aa8.31□□□□□ -1.08
XCL1-201ENST00000367818 COBLO75128 1261 aa8.3□□□□□ -1.08
XCL1-201ENST00000367818 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
XCL1-201ENST00000367818 LCE1DQ5T752 114 aa8.3□□□□□ -1.08
XCL1-201ENST00000367818 VSIG10Q8N0Z9 540 aa8.3□□□□□ -1.08
XCL1-201ENST00000367818 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
XCL1-201ENST00000367818 ATP1B4Q9UN42 357 aaPredicted RBP8.3□□□□□ -1.08
XCL1-201ENST00000367818 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
XCL1-201ENST00000367818 ATP4AP20648 1035 aa8.29□□□□□ -1.08
XCL1-201ENST00000367818 PLA2G4AP47712 749 aa8.29□□□□□ -1.08
XCL1-201ENST00000367818 TNP2Q05952 138 aa8.29□□□□□ -1.08
XCL1-201ENST00000367818 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
XCL1-201ENST00000367818 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
XCL1-201ENST00000367818 C1orf216Q8TAB5 229 aa8.29□□□□□ -1.08
XCL1-201ENST00000367818 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
XCL1-201ENST00000367818 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
XCL1-201ENST00000367818 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
XCL1-201ENST00000367818 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
XCL1-201ENST00000367818 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
XCL1-201ENST00000367818 PRR12Q9ULL5 1215 aa8.28□□□□□ -1.08
XCL1-201ENST00000367818 KHNYNO15037 678 aaKnown RBP8.27□□□□□ -1.09
XCL1-201ENST00000367818 PAX4O43316 350 aa8.25□□□□□ -1.09
XCL1-201ENST00000367818 ALAS2P22557 587 aa8.25□□□□□ -1.09
XCL1-201ENST00000367818 TRIM28Q13263 835 aaKnown RBP8.25□□□□□ -1.09
XCL1-201ENST00000367818 TLR1Q15399 786 aa8.25□□□□□ -1.09
XCL1-201ENST00000367818 FAM157BP0CG42 384 aa8.24□□□□□ -1.09
XCL1-201ENST00000367818 YBX3P16989 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
XCL1-201ENST00000367818 MDFIQ99750 246 aa8.24□□□□□ -1.09
XCL1-201ENST00000367818 PRDM6Q9NQX0 595 aa8.24□□□□□ -1.09
XCL1-201ENST00000367818 TXKP42681 527 aa8.23□□□□□ -1.09
XCL1-201ENST00000367818 NR1H3Q13133 447 aa8.23□□□□□ -1.09
XCL1-201ENST00000367818 COL9A3Q14050 684 aaPredicted RBP8.23□□□□□ -1.09
XCL1-201ENST00000367818 GRIK4Q16099 956 aa8.23□□□□□ -1.09
XCL1-201ENST00000367818 A0A1W2PNR3 127 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 C9orf172C9J069 976 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 M0R082 166 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 ADGRE1Q14246 886 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 MBTPS1Q14703 1052 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
XCL1-201ENST00000367818 ZNF330Q9Y3S2 320 aaPredicted RBP8.22□□□□□ -1.09
XCL1-201ENST00000367818 ELNP15502 786 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 RFC5P40937 340 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 ETNK1Q9HBU6 452 aa8.22□□□□□ -1.09
XCL1-201ENST00000367818 ARID1BQ8NFD5 2236 aaPredicted RBP8.21□□□□□ -1.1
XCL1-201ENST00000367818 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
XCL1-201ENST00000367818 COL17A1Q9UMD9 1497 aaPredicted RBP8.2□□□□□ -1.1
XCL1-201ENST00000367818 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
XCL1-201ENST00000367818 SYT9Q86SS6 491 aa8.2□□□□□ -1.1
XCL1-201ENST00000367818 AIDAQ96BJ3 306 aa8.2□□□□□ -1.1
XCL1-201ENST00000367818 CDCA7Q9BWT1 371 aaPredicted RBP8.2□□□□□ -1.1
XCL1-201ENST00000367818 MARK1Q9P0L2 795 aa8.2□□□□□ -1.1
XCL1-201ENST00000367818 ADARB2-AS1A8MUL3 147 aa8.19□□□□□ -1.1
XCL1-201ENST00000367818 NID1P14543 1247 aa8.19□□□□□ -1.1
XCL1-201ENST00000367818 LAMC2Q13753 1193 aa8.19□□□□□ -1.1
XCL1-201ENST00000367818 CCDC85AQ96PX6 553 aaPredicted RBP8.19□□□□□ -1.1
XCL1-201ENST00000367818 FMNL2Q96PY5 1086 aa8.19□□□□□ -1.1
XCL1-201ENST00000367818 NIFKQ9BYG3 293 aaKnown RBP8.19□□□□□ -1.1
XCL1-201ENST00000367818 EFSO43281 561 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 SIN3BO75182 1162 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 STAU1O95793 577 aaKnown RBP8.18□□□□□ -1.1
XCL1-201ENST00000367818 ALBP02768 609 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 NBPF1Q3BBV0 1214 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 TP53INP1Q96A56 240 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
XCL1-201ENST00000367818 SLC24A3Q9HC58 644 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 STRN4Q9NRL3 753 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
XCL1-201ENST00000367818 STARD13Q9Y3M8 1113 aa8.17□□□□□ -1.1
XCL1-201ENST00000367818 GJA3Q9Y6H8 435 aa8.17□□□□□ -1.1
XCL1-201ENST00000367818 SELPP16109 830 aa8.16□□□□□ -1.1
XCL1-201ENST00000367818 TATP17735 454 aaPredicted RBP8.16□□□□□ -1.1
XCL1-201ENST00000367818 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
XCL1-201ENST00000367818 MICALL1Q8N3F8 863 aa8.16□□□□□ -1.1
XCL1-201ENST00000367818 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
XCL1-201ENST00000367818 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
XCL1-201ENST00000367818 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
XCL1-201ENST00000367818 TNFRSF25Q93038 417 aa8.14□□□□□ -1.11
XCL1-201ENST00000367818 ZIC5Q96T25 663 aa8.14□□□□□ -1.11
XCL1-201ENST00000367818 LENG1Q96BZ8 264 aaPredicted RBP8.13□□□□□ -1.11
XCL1-201ENST00000367818 SSBP4Q9BWG4 385 aaPredicted RBP8.12□□□□□ -1.11
XCL1-201ENST00000367818 TMEM259Q4ZIN3 620 aa8.11□□□□□ -1.11
XCL1-201ENST00000367818 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
XCL1-201ENST00000367818 ADH7P40394 386 aa8.1□□□□□ -1.11
XCL1-201ENST00000367818 SCNN1DP51172 638 aa8.1□□□□□ -1.11
XCL1-201ENST00000367818 USP4Q13107 963 aa8.1□□□□□ -1.11
XCL1-201ENST00000367818 ZNF295-AS1Q8N0V1 137 aa8.1□□□□□ -1.11
XCL1-201ENST00000367818 KRTAP4-9Q9BYQ8 210 aa8.1□□□□□ -1.11
XCL1-201ENST00000367818 PCMTD2Q9NV79 361 aa8.1□□□□□ -1.11
XCL1-201ENST00000367818 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms