RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 FAM212AQ96EL1 285 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 CARD10Q9BWT7 1032 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 PRDM11Q9NQV5 511 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 SMC4Q9NTJ3 1288 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 TNNQ9UQP3 1299 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 IPO8O15397 1037 aaKnown RBP9.41□□□□□ -0.9
ATF3-203ENST00000366981 MVPQ14764 893 aaKnown RBP9.41□□□□□ -0.9
ATF3-203ENST00000366981 ZNF530Q6P9A1 599 aaPredicted RBP9.41□□□□□ -0.9
ATF3-203ENST00000366981 DZIP1LQ8IYY4 767 aaKnown RBP9.41□□□□□ -0.9
ATF3-203ENST00000366981 PANK1Q8TE04 598 aa9.41□□□□□ -0.9
ATF3-203ENST00000366981 BCL2L13Q9BXK5 485 aa9.41□□□□□ -0.9
ATF3-203ENST00000366981 LGR6Q9HBX8 967 aa9.41□□□□□ -0.9
ATF3-203ENST00000366981 NOB1Q9ULX3 412 aaKnown RBP9.41□□□□□ -0.9
ATF3-203ENST00000366981 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
ATF3-203ENST00000366981 LAMB4A4D0S4 1761 aa9.41□□□□□ -0.9
ATF3-203ENST00000366981 C5P01031 1676 aa9.41□□□□□ -0.9
ATF3-203ENST00000366981 ITGB4P16144 1822 aa9.4□□□□□ -0.9
ATF3-203ENST00000366981 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.4□□□□□ -0.9
ATF3-203ENST00000366981 ZBTB7CA1YPR0 619 aa9.4□□□□□ -0.9
ATF3-203ENST00000366981 PHKG2P15735 406 aa9.4□□□□□ -0.9
ATF3-203ENST00000366981 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
ATF3-203ENST00000366981 KRT24Q2M2I5 525 aa9.4□□□□□ -0.9
ATF3-203ENST00000366981 CLUAP1Q96AJ1 413 aa9.4□□□□□ -0.9
ATF3-203ENST00000366981 NLRP2Q9NX02 1062 aa9.4□□□□□ -0.9
ATF3-203ENST00000366981 TSPYL4Q9UJ04 414 aa9.4□□□□□ -0.9
ATF3-203ENST00000366981 SLIT2O94813 1529 aa9.4□□□□□ -0.91
ATF3-203ENST00000366981 CYP27B1O15528 508 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 EIF4A1P60842 406 aaKnown RBP9.39□□□□□ -0.91
ATF3-203ENST00000366981 DEFB132Q7Z7B7 95 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 IFNL2Q8IZJ0 200 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 PELP1Q8IZL8 1130 aaKnown RBP9.39□□□□□ -0.91
ATF3-203ENST00000366981 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
ATF3-203ENST00000366981 ARHGEF1Q92888 912 aaKnown RBP9.39□□□□□ -0.91
ATF3-203ENST00000366981 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 COG6Q9Y2V7 657 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
ATF3-203ENST00000366981 PTPRCP08575 1304 aa9.38□□□□□ -0.91
ATF3-203ENST00000366981 C1orf141Q5JVX7 400 aa9.38□□□□□ -0.91
ATF3-203ENST00000366981 GJD4Q96KN9 370 aaPredicted RBP9.38□□□□□ -0.91
ATF3-203ENST00000366981 SLC24A3Q9HC58 644 aa9.38□□□□□ -0.91
ATF3-203ENST00000366981 MIS18AQ9NYP9 233 aa9.38□□□□□ -0.91
ATF3-203ENST00000366981 DDX19BQ9UMR2 479 aa9.38□□□□□ -0.91
ATF3-203ENST00000366981 INTS3Q68E01 1043 aaKnown RBP9.37□□□□□ -0.91
ATF3-203ENST00000366981 MPRIPQ6WCQ1 1025 aa9.37□□□□□ -0.91
ATF3-203ENST00000366981 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
ATF3-203ENST00000366981 TMEM57Q8N5G2 664 aa9.37□□□□□ -0.91
ATF3-203ENST00000366981 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
ATF3-203ENST00000366981 API5Q9BZZ5 524 aaKnown RBP9.37□□□□□ -0.91
ATF3-203ENST00000366981 ZBTB40Q9NUA8 1239 aa9.37□□□□□ -0.91
ATF3-203ENST00000366981 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
ATF3-203ENST00000366981 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
ATF3-203ENST00000366981 CICQ96RK0 1608 aaPredicted RBP9.36□□□□□ -0.91
ATF3-203ENST00000366981 ELL2O00472 640 aaPredicted RBP9.36□□□□□ -0.91
ATF3-203ENST00000366981 ZBTB7BO15156 539 aaPredicted RBP9.36□□□□□ -0.91
ATF3-203ENST00000366981 HSP90AB1P08238 724 aaKnown RBP9.36□□□□□ -0.91
ATF3-203ENST00000366981 CSB-PGBD3P0DP91 1061 aa9.36□□□□□ -0.91
ATF3-203ENST00000366981 IL2RBP14784 551 aa9.36□□□□□ -0.91
ATF3-203ENST00000366981 CANXP27824 592 aaKnown RBP9.36□□□□□ -0.91
ATF3-203ENST00000366981 EVX2Q03828 476 aa9.36□□□□□ -0.91
ATF3-203ENST00000366981 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
ATF3-203ENST00000366981 SLC52A2Q9HAB3 445 aa9.36□□□□□ -0.91
ATF3-203ENST00000366981 IBTKQ9P2D0 1353 aaPredicted RBP9.36□□□□□ -0.91
ATF3-203ENST00000366981 YY1P25490 414 aa9.35□□□□□ -0.91
ATF3-203ENST00000366981 TEFQ10587 303 aa9.35□□□□□ -0.91
ATF3-203ENST00000366981 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
ATF3-203ENST00000366981 TOM1L2Q6ZVM7 507 aa9.35□□□□□ -0.91
ATF3-203ENST00000366981 CHMP4AQ9BY43 222 aa9.35□□□□□ -0.91
ATF3-203ENST00000366981 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
ATF3-203ENST00000366981 KCPQ6ZWJ8 1503 aa9.35□□□□□ -0.91
ATF3-203ENST00000366981 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 BTBD11A6QL63 1104 aa9.34□□□□□ -0.91
ATF3-203ENST00000366981 KCNQ3O43525 872 aa9.34□□□□□ -0.91
ATF3-203ENST00000366981 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 IGHDP01880 384 aa9.34□□□□□ -0.91
ATF3-203ENST00000366981 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 SF3B2Q13435 895 aaKnown RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 HDAC1Q13547 482 aaPredicted RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 IFFO2Q5TF58 517 aa9.34□□□□□ -0.91
ATF3-203ENST00000366981 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
ATF3-203ENST00000366981 FTSJ3Q8IY81 847 aaKnown RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 SPDYE1Q8NFV5 336 aaPredicted RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 ZCRB1Q8TBF4 217 aaKnown RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 CHMP4BQ9H444 224 aaKnown RBP9.34□□□□□ -0.91
ATF3-203ENST00000366981 BTG4Q9NY30 223 aa9.34□□□□□ -0.91
ATF3-203ENST00000366981 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
ATF3-203ENST00000366981 ERVV-2B6SEH9 535 aa9.33□□□□□ -0.92
ATF3-203ENST00000366981 ZNF790Q6PG37 636 aa9.33□□□□□ -0.92
ATF3-203ENST00000366981 G2E3Q7L622 706 aa9.33□□□□□ -0.92
ATF3-203ENST00000366981 DOT1LQ8TEK3 1739 aa9.32□□□□□ -0.92
ATF3-203ENST00000366981 ZMYND10O75800 440 aa9.32□□□□□ -0.92
ATF3-203ENST00000366981 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
ATF3-203ENST00000366981 THRAP3Q9Y2W1 955 aaKnown RBP9.32□□□□□ -0.92
ATF3-203ENST00000366981 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
ATF3-203ENST00000366981 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
ATF3-203ENST00000366981 SPATA31A1Q5TZJ5 1347 aa9.31□□□□□ -0.92
ATF3-203ENST00000366981 ATP10DQ9P241 1426 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms