RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 FIBPO43427 364 aa16.43■□□□□ 0.22
PRKN-205ENST00000366897 MCM5P33992 734 aa16.43■□□□□ 0.22
PRKN-205ENST00000366897 TCHHQ07283 1943 aa16.43■□□□□ 0.22
PRKN-205ENST00000366897 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
PRKN-205ENST00000366897 DYNC1I1O14576 645 aa16.42■□□□□ 0.22
PRKN-205ENST00000366897 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
PRKN-205ENST00000366897 HAP1P54257 671 aaPredicted RBP16.42■□□□□ 0.22
PRKN-205ENST00000366897 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
PRKN-205ENST00000366897 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
PRKN-205ENST00000366897 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
PRKN-205ENST00000366897 SYAP1Q96A49 352 aaPredicted RBP16.42■□□□□ 0.22
PRKN-205ENST00000366897 AMOTL2Q9Y2J4 779 aa16.42■□□□□ 0.22
PRKN-205ENST00000366897 NWD1Q149M9 1564 aa16.42■□□□□ 0.22
PRKN-205ENST00000366897 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
PRKN-205ENST00000366897 ADCY5O95622 1261 aa16.41■□□□□ 0.22
PRKN-205ENST00000366897 MCM2P49736 904 aa16.41■□□□□ 0.22
PRKN-205ENST00000366897 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
PRKN-205ENST00000366897 FLIIQ13045 1269 aa16.41■□□□□ 0.22
PRKN-205ENST00000366897 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
PRKN-205ENST00000366897 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
PRKN-205ENST00000366897 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
PRKN-205ENST00000366897 CRB1P82279 1406 aa16.4■□□□□ 0.22
PRKN-205ENST00000366897 INTS4Q96HW7 963 aaKnown RBP16.4■□□□□ 0.22
PRKN-205ENST00000366897 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
PRKN-205ENST00000366897 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
PRKN-205ENST00000366897 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
PRKN-205ENST00000366897 MAP7D2Q96T17 732 aa16.39■□□□□ 0.21
PRKN-205ENST00000366897 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
PRKN-205ENST00000366897 CHMP3Q9Y3E7 222 aa16.39■□□□□ 0.21
PRKN-205ENST00000366897 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
PRKN-205ENST00000366897 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
PRKN-205ENST00000366897 PRDM4Q9UKN5 801 aa16.38■□□□□ 0.21
PRKN-205ENST00000366897 ATP8B2P98198 1209 aa16.38■□□□□ 0.21
PRKN-205ENST00000366897 NOLC1Q14978 699 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRKN-205ENST00000366897 ACEP12821 1306 aa16.37■□□□□ 0.21
PRKN-205ENST00000366897 LARGE1O95461 756 aa16.37■□□□□ 0.21
PRKN-205ENST00000366897 AK2P54819 239 aa16.37■□□□□ 0.21
PRKN-205ENST00000366897 ANAPC15P60006 121 aa16.37■□□□□ 0.21
PRKN-205ENST00000366897 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
PRKN-205ENST00000366897 SURF6O75683 361 aaKnown RBP16.36■□□□□ 0.21
PRKN-205ENST00000366897 PHF14O94880 888 aa16.36■□□□□ 0.21
PRKN-205ENST00000366897 SYT1P21579 422 aa16.36■□□□□ 0.21
PRKN-205ENST00000366897 CWC27Q6UX04 472 aaKnown RBP16.36■□□□□ 0.21
PRKN-205ENST00000366897 ZNF710Q8N1W2 664 aa16.36■□□□□ 0.21
PRKN-205ENST00000366897 ZHX1Q9UKY1 873 aaPredicted RBP16.36■□□□□ 0.21
PRKN-205ENST00000366897 AP5Z1O43299 807 aa16.36■□□□□ 0.21
PRKN-205ENST00000366897 HSPA4P34932 840 aa16.36■□□□□ 0.21
PRKN-205ENST00000366897 CCDC183Q5T5S1 534 aa16.36■□□□□ 0.21
PRKN-205ENST00000366897 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
PRKN-205ENST00000366897 GNAI3P08754 354 aa16.35■□□□□ 0.21
PRKN-205ENST00000366897 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
PRKN-205ENST00000366897 MYRIPQ8NFW9 859 aa16.35■□□□□ 0.21
PRKN-205ENST00000366897 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
PRKN-205ENST00000366897 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
PRKN-205ENST00000366897 PIBF1Q8WXW3 757 aa16.35■□□□□ 0.21
PRKN-205ENST00000366897 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
PRKN-205ENST00000366897 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
PRKN-205ENST00000366897 CCDC83Q8IWF9 413 aa16.34■□□□□ 0.21
PRKN-205ENST00000366897 STX6O43752 255 aa16.34■□□□□ 0.21
PRKN-205ENST00000366897 UBTFL1P0CB47 393 aaPredicted RBP16.34■□□□□ 0.21
PRKN-205ENST00000366897 DNM1Q05193 864 aaKnown RBP16.34■□□□□ 0.21
PRKN-205ENST00000366897 STAP2Q9UGK3 403 aa16.33■□□□□ 0.21
PRKN-205ENST00000366897 NUTM2GQ5VZR2 741 aa16.33■□□□□ 0.2
PRKN-205ENST00000366897 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
PRKN-205ENST00000366897 LTV1Q96GA3 475 aaPredicted RBP16.33■□□□□ 0.2
PRKN-205ENST00000366897 HSPA1LP34931 641 aa16.32■□□□□ 0.2
PRKN-205ENST00000366897 CBX1P83916 185 aa16.32■□□□□ 0.2
PRKN-205ENST00000366897 EYA1Q99502 592 aa16.32■□□□□ 0.2
PRKN-205ENST00000366897 PYCARDQ9ULZ3 195 aa16.32■□□□□ 0.2
PRKN-205ENST00000366897 SMC3Q9UQE7 1217 aa16.32■□□□□ 0.2
PRKN-205ENST00000366897 DLC1Q96QB1 1528 aa16.32■□□□□ 0.2
PRKN-205ENST00000366897 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
PRKN-205ENST00000366897 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
PRKN-205ENST00000366897 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
PRKN-205ENST00000366897 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
PRKN-205ENST00000366897 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
PRKN-205ENST00000366897 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
PRKN-205ENST00000366897 SGSM2O43147 1006 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 COL9A3Q14050 684 aaPredicted RBP16.31■□□□□ 0.2
PRKN-205ENST00000366897 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
PRKN-205ENST00000366897 SRGAP3O43295 1099 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 F13A1P00488 732 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 ANXA1P04083 346 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 ADCK5Q3MIX3 580 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 NECAB1Q8N987 351 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 FAM184AQ8NB25 1140 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 C19orf44Q9H6X5 657 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
PRKN-205ENST00000366897 RAD50Q92878 1312 aa16.31■□□□□ 0.2
PRKN-205ENST00000366897 KDM4AO75164 1064 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 AMPHP49418 695 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 UBE2HP62256 183 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 RHPN1Q8TCX5 695 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 TTC14Q96N46 770 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 NBPF7P0C2Y1 421 aaPredicted RBP16.3■□□□□ 0.2
PRKN-205ENST00000366897 CAMK4Q16566 473 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms