RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ABCA8O94911 1581 aa12.56□□□□□ -0.4
H3F3A-201ENST00000366813 TTC37Q6PGP7 1564 aa12.56□□□□□ -0.4
H3F3A-201ENST00000366813 TRAK2O60296 914 aa12.55□□□□□ -0.4
H3F3A-201ENST00000366813 GNRH1P01148 92 aa12.55□□□□□ -0.4
H3F3A-201ENST00000366813 MCM6Q14566 821 aa12.55□□□□□ -0.4
H3F3A-201ENST00000366813 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
H3F3A-201ENST00000366813 FOXR1Q6PIV2 292 aa12.55□□□□□ -0.4
H3F3A-201ENST00000366813 GAS2L1Q99501 681 aaPredicted RBP12.55□□□□□ -0.4
H3F3A-201ENST00000366813 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
H3F3A-201ENST00000366813 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
H3F3A-201ENST00000366813 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
H3F3A-201ENST00000366813 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
H3F3A-201ENST00000366813 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
H3F3A-201ENST00000366813 RAB6BQ9NRW1 208 aa12.54□□□□□ -0.4
H3F3A-201ENST00000366813 CUEDC1Q9NWM3 386 aaPredicted RBP12.54□□□□□ -0.4
H3F3A-201ENST00000366813 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
H3F3A-201ENST00000366813 FER1L4A9Z1Z3 1794 aa12.53□□□□□ -0.4
H3F3A-201ENST00000366813 ABL2P42684 1182 aa12.53□□□□□ -0.4
H3F3A-201ENST00000366813 SVOPQ8N4V2 548 aa12.53□□□□□ -0.4
H3F3A-201ENST00000366813 GMCL1Q96IK5 515 aa12.53□□□□□ -0.4
H3F3A-201ENST00000366813 DENND4BO75064 1496 aaPredicted RBP12.53□□□□□ -0.4
H3F3A-201ENST00000366813 H7C1W4 665 aa12.52□□□□□ -0.41
H3F3A-201ENST00000366813 USP4Q13107 963 aa12.52□□□□□ -0.41
H3F3A-201ENST00000366813 CNKSR1Q969H4 720 aa12.52□□□□□ -0.41
H3F3A-201ENST00000366813 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.41
H3F3A-201ENST00000366813 DYRK1BQ9Y463 629 aa12.52□□□□□ -0.41
H3F3A-201ENST00000366813 ZNF335Q9H4Z2 1342 aaPredicted RBP12.51□□□□□ -0.41
H3F3A-201ENST00000366813 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
H3F3A-201ENST00000366813 IRF5Q13568 498 aa12.51□□□□□ -0.41
H3F3A-201ENST00000366813 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
H3F3A-201ENST00000366813 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
H3F3A-201ENST00000366813 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
H3F3A-201ENST00000366813 TIMMDC1Q9NPL8 285 aa12.51□□□□□ -0.41
H3F3A-201ENST00000366813 DOLKQ9UPQ8 538 aa12.51□□□□□ -0.41
H3F3A-201ENST00000366813 ATP10BO94823 1461 aa12.5□□□□□ -0.41
H3F3A-201ENST00000366813 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
H3F3A-201ENST00000366813 TAS1R3Q7RTX0 852 aa12.5□□□□□ -0.41
H3F3A-201ENST00000366813 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
H3F3A-201ENST00000366813 ESYT1Q9BSJ8 1104 aa12.5□□□□□ -0.41
H3F3A-201ENST00000366813 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
H3F3A-201ENST00000366813 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
H3F3A-201ENST00000366813 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
H3F3A-201ENST00000366813 PIP4K2BP78356 416 aa12.49□□□□□ -0.41
H3F3A-201ENST00000366813 CENPCQ03188 943 aa12.49□□□□□ -0.41
H3F3A-201ENST00000366813 ZNF385CQ66K41 422 aaPredicted RBP12.49□□□□□ -0.41
H3F3A-201ENST00000366813 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
H3F3A-201ENST00000366813 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
H3F3A-201ENST00000366813 DBN1Q16643 649 aa12.48□□□□□ -0.41
H3F3A-201ENST00000366813 WASHC4Q2M389 1173 aa12.48□□□□□ -0.41
H3F3A-201ENST00000366813 TSGA10IPQ3SY00 556 aa12.48□□□□□ -0.41
H3F3A-201ENST00000366813 WDR44Q5JSH3 913 aa12.48□□□□□ -0.41
H3F3A-201ENST00000366813 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
H3F3A-201ENST00000366813 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
H3F3A-201ENST00000366813 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
H3F3A-201ENST00000366813 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
H3F3A-201ENST00000366813 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
H3F3A-201ENST00000366813 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
H3F3A-201ENST00000366813 ZMYND15Q9H091 742 aa12.47□□□□□ -0.41
H3F3A-201ENST00000366813 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
H3F3A-201ENST00000366813 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
H3F3A-201ENST00000366813 IL2RAP01589 272 aa12.46□□□□□ -0.41
H3F3A-201ENST00000366813 SRSF11Q05519 484 aaKnown RBP12.46□□□□□ -0.41
H3F3A-201ENST00000366813 SEMA3FQ13275 785 aa12.46□□□□□ -0.41
H3F3A-201ENST00000366813 PHTF2Q8N3S3 785 aa12.46□□□□□ -0.41
H3F3A-201ENST00000366813 WHAMMQ8TF30 809 aa12.46□□□□□ -0.41
H3F3A-201ENST00000366813 TRERF1Q96PN7 1200 aa12.46□□□□□ -0.41
H3F3A-201ENST00000366813 ZSCAN10Q96SZ4 725 aaPredicted RBP12.46□□□□□ -0.41
H3F3A-201ENST00000366813 GPR25O00155 361 aa12.45□□□□□ -0.42
H3F3A-201ENST00000366813 OXLD1Q5BKU9 147 aa12.45□□□□□ -0.42
H3F3A-201ENST00000366813 TMEM214Q6NUQ4 689 aaKnown RBP12.45□□□□□ -0.42
H3F3A-201ENST00000366813 GTPBP3Q969Y2 492 aaKnown RBP12.45□□□□□ -0.42
H3F3A-201ENST00000366813 XAGE2Q96GT9 111 aa12.45□□□□□ -0.42
H3F3A-201ENST00000366813 SETD1BQ9UPS6 1966 aaKnown RBP12.44□□□□□ -0.42
H3F3A-201ENST00000366813 F11P03951 625 aa12.44□□□□□ -0.42
H3F3A-201ENST00000366813 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
H3F3A-201ENST00000366813 PHKA2P46019 1235 aa12.44□□□□□ -0.42
H3F3A-201ENST00000366813 GNASQ5JWF2 1037 aa12.44□□□□□ -0.42
H3F3A-201ENST00000366813 NCOA1Q15788 1441 aa12.44□□□□□ -0.42
H3F3A-201ENST00000366813 MARSP56192 900 aaKnown RBP12.43□□□□□ -0.42
H3F3A-201ENST00000366813 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
H3F3A-201ENST00000366813 KCNMA1Q12791 1236 aa12.43□□□□□ -0.42
H3F3A-201ENST00000366813 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
H3F3A-201ENST00000366813 RNF225M0QZC1 329 aaPredicted RBP12.42□□□□□ -0.42
H3F3A-201ENST00000366813 GAS6Q14393 721 aa12.42□□□□□ -0.42
H3F3A-201ENST00000366813 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
H3F3A-201ENST00000366813 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
H3F3A-201ENST00000366813 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
H3F3A-201ENST00000366813 NUCKS1Q9H1E3 243 aaKnown RBP12.41□□□□□ -0.42
H3F3A-201ENST00000366813 RGS17Q9UGC6 210 aaPredicted RBP12.41□□□□□ -0.42
H3F3A-201ENST00000366813 GOLGA3Q08378 1498 aa12.41□□□□□ -0.42
H3F3A-201ENST00000366813 LYPD4Q6UWN0 246 aa12.4□□□□□ -0.42
H3F3A-201ENST00000366813 ENAMQ9NRM1 1142 aa12.4□□□□□ -0.42
H3F3A-201ENST00000366813 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
H3F3A-201ENST00000366813 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
H3F3A-201ENST00000366813 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
H3F3A-201ENST00000366813 GPAMQ9HCL2 828 aa12.39□□□□□ -0.43
H3F3A-201ENST00000366813 HECW1Q76N89 1606 aa12.39□□□□□ -0.43
H3F3A-201ENST00000366813 ATP10AO60312 1499 aa12.39□□□□□ -0.43
H3F3A-201ENST00000366813 A6NJR5 290 aa12.38□□□□□ -0.43
H3F3A-201ENST00000366813 ARHGEF15O94989 841 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms