RNA–Protein interactions for RNA: ENST00000366684.7

ACTA1-202, Transcript of actin, alpha 1, skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTA1, Length 1,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1-202ENST00000366684 LMOD3Q0VAK6 560 aa19.31■□□□□ 0.68
ACTA1-202ENST00000366684 TRAPPC3LQ5T215 181 aa19.31■□□□□ 0.68
ACTA1-202ENST00000366684 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
ACTA1-202ENST00000366684 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
ACTA1-202ENST00000366684 KDM3BQ7LBC6 1761 aa19.3■□□□□ 0.68
ACTA1-202ENST00000366684 MSL1Q68DK7 614 aa19.3■□□□□ 0.68
ACTA1-202ENST00000366684 ARXQ96QS3 562 aa19.3■□□□□ 0.68
ACTA1-202ENST00000366684 RRP7AQ9Y3A4 280 aaKnown RBP19.3■□□□□ 0.68
ACTA1-202ENST00000366684 TEX13AQ9BXU3 409 aaPredicted RBP19.29■□□□□ 0.68
ACTA1-202ENST00000366684 ARHGEF1Q92888 912 aaKnown RBP19.28■□□□□ 0.68
ACTA1-202ENST00000366684 STARD3NLO95772 234 aa19.28■□□□□ 0.68
ACTA1-202ENST00000366684 NEUROD2Q15784 382 aa19.28■□□□□ 0.68
ACTA1-202ENST00000366684 MIS18AQ9NYP9 233 aa19.28■□□□□ 0.68
ACTA1-202ENST00000366684 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
ACTA1-202ENST00000366684 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
ACTA1-202ENST00000366684 ZBTB1Q9Y2K1 713 aa19.27■□□□□ 0.67
ACTA1-202ENST00000366684 RFC4P35249 363 aa19.26■□□□□ 0.67
ACTA1-202ENST00000366684 FHDC1Q9C0D6 1143 aaPredicted RBP19.25■□□□□ 0.67
ACTA1-202ENST00000366684 TRIM35Q9UPQ4 493 aa19.25■□□□□ 0.67
ACTA1-202ENST00000366684 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
ACTA1-202ENST00000366684 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
ACTA1-202ENST00000366684 COL15A1P39059 1388 aa19.24■□□□□ 0.67
ACTA1-202ENST00000366684 APAF1O14727 1248 aa19.23■□□□□ 0.67
ACTA1-202ENST00000366684 NEFLP07196 543 aa19.23■□□□□ 0.67
ACTA1-202ENST00000366684 USP42Q9H9J4 1324 aaKnown RBP19.23■□□□□ 0.67
ACTA1-202ENST00000366684 PRAMEF22A3QJZ6 481 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 GYS1P13807 737 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 CANXP27824 592 aaKnown RBP19.22■□□□□ 0.67
ACTA1-202ENST00000366684 SYT17Q9BSW7 474 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
ACTA1-202ENST00000366684 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 NLGN1Q8N2Q7 840 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 TSPYL4Q9UJ04 414 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
ACTA1-202ENST00000366684 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
ACTA1-202ENST00000366684 EIF4A1P60842 406 aaKnown RBP19.21■□□□□ 0.67
ACTA1-202ENST00000366684 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
ACTA1-202ENST00000366684 A1BGP04217 495 aa19.2■□□□□ 0.66
ACTA1-202ENST00000366684 ZPR1O75312 459 aa19.19■□□□□ 0.66
ACTA1-202ENST00000366684 GIGYF1O75420 1035 aaPredicted RBP19.19■□□□□ 0.66
ACTA1-202ENST00000366684 MMP10P09238 476 aa19.19■□□□□ 0.66
ACTA1-202ENST00000366684 IL6STP40189 918 aaPredicted RBP19.19■□□□□ 0.66
ACTA1-202ENST00000366684 KLHL34Q8N239 644 aa19.19■□□□□ 0.66
ACTA1-202ENST00000366684 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
ACTA1-202ENST00000366684 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
ACTA1-202ENST00000366684 ZNF521Q96K83 1311 aa19.17■□□□□ 0.66
ACTA1-202ENST00000366684 A0A087WZG4 1122 aa19.17■□□□□ 0.66
ACTA1-202ENST00000366684 CHL1O00533 1208 aa19.17■□□□□ 0.66
ACTA1-202ENST00000366684 GOLGA2Q08379 1002 aa19.17■□□□□ 0.66
ACTA1-202ENST00000366684 FKBP8Q14318 412 aa19.17■□□□□ 0.66
ACTA1-202ENST00000366684 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
ACTA1-202ENST00000366684 SCN7AQ01118 1682 aa19.16■□□□□ 0.66
ACTA1-202ENST00000366684 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
ACTA1-202ENST00000366684 ZNF330Q9Y3S2 320 aaPredicted RBP19.16■□□□□ 0.66
ACTA1-202ENST00000366684 PIP4K2AP48426 406 aaPredicted RBP19.15■□□□□ 0.66
ACTA1-202ENST00000366684 LAS1LQ9Y4W2 734 aaKnown RBP19.15■□□□□ 0.66
ACTA1-202ENST00000366684 CD2APQ9Y5K6 639 aa19.15■□□□□ 0.66
ACTA1-202ENST00000366684 NBPF26B4DH59 902 aa19.14■□□□□ 0.65
ACTA1-202ENST00000366684 CALD1Q05682 793 aaKnown RBP19.14■□□□□ 0.65
ACTA1-202ENST00000366684 NBPF10Q6P3W6 841 aaKnown RBP19.14■□□□□ 0.65
ACTA1-202ENST00000366684 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
ACTA1-202ENST00000366684 NBPF15Q8N660 670 aa19.14■□□□□ 0.65
ACTA1-202ENST00000366684 NLGN2Q8NFZ4 835 aa19.14■□□□□ 0.65
ACTA1-202ENST00000366684 CFAP44Q96MT7 982 aa19.14■□□□□ 0.65
ACTA1-202ENST00000366684 BCL2L12Q9HB09 334 aa19.14■□□□□ 0.65
ACTA1-202ENST00000366684 TBC1D2BQ9UPU7 963 aa19.13■□□□□ 0.65
ACTA1-202ENST00000366684 PARP3Q9Y6F1 533 aa19.13■□□□□ 0.65
ACTA1-202ENST00000366684 E9PSI1 815 aa19.12■□□□□ 0.65
ACTA1-202ENST00000366684 ZNF853P0CG23 659 aa19.12■□□□□ 0.65
ACTA1-202ENST00000366684 DDR1Q08345 913 aa19.12■□□□□ 0.65
ACTA1-202ENST00000366684 KIF13BQ9NQT8 1826 aa19.12■□□□□ 0.65
ACTA1-202ENST00000366684 BCORQ6W2J9 1755 aa19.12■□□□□ 0.65
ACTA1-202ENST00000366684 TM4SF1P30408 202 aa19.11■□□□□ 0.65
ACTA1-202ENST00000366684 IFT57Q9NWB7 429 aa19.11■□□□□ 0.65
ACTA1-202ENST00000366684 SUPT16HQ9Y5B9 1047 aaKnown RBP19.11■□□□□ 0.65
ACTA1-202ENST00000366684 C10orf71Q711Q0 1435 aa19.1■□□□□ 0.65
ACTA1-202ENST00000366684 DZIP3Q86Y13 1208 aaKnown RBP19.1■□□□□ 0.65
ACTA1-202ENST00000366684 WDR63Q8IWG1 891 aa19.1■□□□□ 0.65
ACTA1-202ENST00000366684 WWC1Q8IX03 1113 aa19.1■□□□□ 0.65
ACTA1-202ENST00000366684 MBIPQ9NS73 344 aa19.1■□□□□ 0.65
ACTA1-202ENST00000366684 ERBB4Q15303 1308 aa19.1■□□□□ 0.65
ACTA1-202ENST00000366684 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
ACTA1-202ENST00000366684 POLRMTO00411 1230 aaKnown RBP19.09■□□□□ 0.65
ACTA1-202ENST00000366684 CAMTA2O94983 1202 aa19.09■□□□□ 0.65
ACTA1-202ENST00000366684 GNAI1P63096 354 aa19.09■□□□□ 0.65
ACTA1-202ENST00000366684 NFIXQ14938 502 aa19.09■□□□□ 0.65
ACTA1-202ENST00000366684 CDCA7LQ96GN5 454 aa19.09■□□□□ 0.65
ACTA1-202ENST00000366684 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
ACTA1-202ENST00000366684 GOLGB1Q14789 3259 aaKnown RBP19.08■□□□□ 0.64
ACTA1-202ENST00000366684 SLFN5Q08AF3 891 aa19.08■□□□□ 0.64
ACTA1-202ENST00000366684 NRXN2Q9P2S2 1712 aa19.07■□□□□ 0.64
ACTA1-202ENST00000366684 AFDNP55196 1824 aaKnown RBP19.07■□□□□ 0.64
ACTA1-202ENST00000366684 EIF2S2P20042 333 aaKnown RBP19.07■□□□□ 0.64
ACTA1-202ENST00000366684 KIAA1551Q9HCM1 1747 aa19.07■□□□□ 0.64
ACTA1-202ENST00000366684 HOXB7P09629 217 aa19.06■□□□□ 0.64
ACTA1-202ENST00000366684 TBC1D9BQ66K14 1250 aa19.06■□□□□ 0.64
ACTA1-202ENST00000366684 PXDNLA1KZ92 1463 aa19.05■□□□□ 0.64
ACTA1-202ENST00000366684 RGL2O15211 777 aa19.05■□□□□ 0.64
ACTA1-202ENST00000366684 MYL6BP14649 208 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms