RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ADAMTS7Q9UKP4 1686 aa15.07■□□□□ 0
CSNK1E-202ENST00000366216 VEGFAP15692 232 aaPredicted RBP15.07■□□□□ 0
CSNK1E-202ENST00000366216 RFC4P35249 363 aa15.07■□□□□ 0
CSNK1E-202ENST00000366216 CCDC184Q52MB2 194 aa15.07■□□□□ 0
CSNK1E-202ENST00000366216 AMER1Q5JTC6 1135 aaPredicted RBP15.07■□□□□ 0
CSNK1E-202ENST00000366216 CACNA1SQ13698 1873 aa15.07■□□□□ 0
CSNK1E-202ENST00000366216 TJP1Q07157 1748 aa15.06■□□□□ 0
CSNK1E-202ENST00000366216 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
CSNK1E-202ENST00000366216 CARD14Q9BXL6 1004 aa15.06■□□□□ 0
CSNK1E-202ENST00000366216 EYA1Q99502 592 aa15.05■□□□□ -0
CSNK1E-202ENST00000366216 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
CSNK1E-202ENST00000366216 CNTNAP4Q9C0A0 1308 aa15.04■□□□□ -0
CSNK1E-202ENST00000366216 GLTPD2A6NH11 291 aa15.04■□□□□ -0
CSNK1E-202ENST00000366216 SLC4A2P04920 1241 aa15.04■□□□□ -0
CSNK1E-202ENST00000366216 PHKG2P15735 406 aa15.04■□□□□ -0
CSNK1E-202ENST00000366216 DDR1Q08345 913 aa15.04■□□□□ -0
CSNK1E-202ENST00000366216 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
CSNK1E-202ENST00000366216 RPS6KA4O75676 772 aa15.03■□□□□ -0
CSNK1E-202ENST00000366216 CHRNA5P30532 468 aa15.03■□□□□ -0
CSNK1E-202ENST00000366216 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
CSNK1E-202ENST00000366216 SRP68Q9UHB9 627 aaKnown RBP15.03■□□□□ -0
CSNK1E-202ENST00000366216 RASSF7Q02833 373 aa15.02■□□□□ -0
CSNK1E-202ENST00000366216 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
CSNK1E-202ENST00000366216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.02■□□□□ -0
CSNK1E-202ENST00000366216 LMNB1P20700 586 aa15.01□□□□□ -0.01
CSNK1E-202ENST00000366216 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
CSNK1E-202ENST00000366216 FKBP8Q14318 412 aa15.01□□□□□ -0.01
CSNK1E-202ENST00000366216 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
CSNK1E-202ENST00000366216 SCN4AP35499 1836 aa15.01□□□□□ -0.01
CSNK1E-202ENST00000366216 ANKRD31Q8N7Z5 1873 aa15□□□□□ -0.01
CSNK1E-202ENST00000366216 FOXN1O15353 648 aa15□□□□□ -0.01
CSNK1E-202ENST00000366216 PRDM10Q9NQV6 1147 aa15□□□□□ -0.01
CSNK1E-202ENST00000366216 SCN11AQ9UI33 1791 aa15□□□□□ -0.01
CSNK1E-202ENST00000366216 POTECB2RU33 542 aa14.99□□□□□ -0.01
CSNK1E-202ENST00000366216 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
CSNK1E-202ENST00000366216 PCDH10Q9P2E7 1040 aa14.99□□□□□ -0.01
CSNK1E-202ENST00000366216 MKRN1Q9UHC7 482 aaKnown RBP14.99□□□□□ -0.01
CSNK1E-202ENST00000366216 USP42Q9H9J4 1324 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-202ENST00000366216 PNISRQ8TF01 805 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-202ENST00000366216 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
CSNK1E-202ENST00000366216 FAM9BQ8IZU0 186 aa14.97□□□□□ -0.01
CSNK1E-202ENST00000366216 ARFGEF2Q9Y6D5 1785 aa14.97□□□□□ -0.01
CSNK1E-202ENST00000366216 ERVV-2B6SEH9 535 aa14.96□□□□□ -0.01
CSNK1E-202ENST00000366216 POLRMTO00411 1230 aaKnown RBP14.96□□□□□ -0.01
CSNK1E-202ENST00000366216 PPP2R1AP30153 589 aa14.96□□□□□ -0.01
CSNK1E-202ENST00000366216 FAM161AQ3B820 660 aa14.96□□□□□ -0.01
CSNK1E-202ENST00000366216 POLKQ9UBT6 870 aa14.96□□□□□ -0.01
CSNK1E-202ENST00000366216 TNRC18O15417 2968 aaPredicted RBP14.96□□□□□ -0.02
CSNK1E-202ENST00000366216 COL11A2P13942 1736 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-202ENST00000366216 TM4SF1P30408 202 aa14.95□□□□□ -0.02
CSNK1E-202ENST00000366216 CTCFP49711 727 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-202ENST00000366216 EIF4A2Q14240 407 aaKnown RBP14.95□□□□□ -0.02
CSNK1E-202ENST00000366216 CNTNAP1P78357 1384 aa14.95□□□□□ -0.02
CSNK1E-202ENST00000366216 CRKLP46109 303 aaKnown RBP14.94□□□□□ -0.02
CSNK1E-202ENST00000366216 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
CSNK1E-202ENST00000366216 AIDAQ96BJ3 306 aa14.94□□□□□ -0.02
CSNK1E-202ENST00000366216 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
CSNK1E-202ENST00000366216 HNRNPUQ00839 825 aaKnown RBP eCLIP14.93□□□□□ -0.02
CSNK1E-202ENST00000366216 DPY19L2Q6NUT2 758 aa14.93□□□□□ -0.02
CSNK1E-202ENST00000366216 INTS5Q6P9B9 1019 aaKnown RBP14.93□□□□□ -0.02
CSNK1E-202ENST00000366216 PDE4DIPQ5VU43 2346 aa14.93□□□□□ -0.02
CSNK1E-202ENST00000366216 PTCD1O75127 700 aaKnown RBP14.92□□□□□ -0.02
CSNK1E-202ENST00000366216 SLX4Q8IY92 1834 aa14.92□□□□□ -0.02
CSNK1E-202ENST00000366216 TTLL6Q8N841 843 aa14.91□□□□□ -0.02
CSNK1E-202ENST00000366216 ABHD8Q96I13 439 aa14.91□□□□□ -0.02
CSNK1E-202ENST00000366216 TRPM7Q96QT4 1865 aa14.91□□□□□ -0.02
CSNK1E-202ENST00000366216 NFKBIEO00221 500 aa14.9□□□□□ -0.02
CSNK1E-202ENST00000366216 HSP90AB1P08238 724 aaKnown RBP14.9□□□□□ -0.02
CSNK1E-202ENST00000366216 LBX1P52954 281 aa14.9□□□□□ -0.02
CSNK1E-202ENST00000366216 MORC1Q86VD1 984 aa14.9□□□□□ -0.02
CSNK1E-202ENST00000366216 BCL2L12Q9HB09 334 aa14.9□□□□□ -0.02
CSNK1E-202ENST00000366216 CARMIL3Q8ND23 1372 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 ADAMTSL1Q8N6G6 1762 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 ZPR1O75312 459 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 VEGFBP49765 207 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 CABP4P57796 275 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 USPL1Q5W0Q7 1092 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 AEBP1Q8IUX7 1158 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
CSNK1E-202ENST00000366216 NFIXQ14938 502 aa14.88□□□□□ -0.03
CSNK1E-202ENST00000366216 ERFEQ4G0M1 354 aa14.88□□□□□ -0.03
CSNK1E-202ENST00000366216 WBP1LQ9NX94 342 aa14.88□□□□□ -0.03
CSNK1E-202ENST00000366216 PASKQ96RG2 1323 aa14.88□□□□□ -0.03
CSNK1E-202ENST00000366216 THSD7BQ9C0I4 1608 aa14.88□□□□□ -0.03
CSNK1E-202ENST00000366216 ATXN8OSP0DMR3 200 aa14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 MLLT1Q03111 559 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 ZNF530Q6P9A1 599 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 C2CD5Q86YS7 1000 aa14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 DNAJC10Q8IXB1 793 aa14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 NFATC2IPQ8NCF5 419 aa14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 CASP8AP2Q9UKL3 1982 aa14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 SOS1Q07889 1333 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-202ENST00000366216 H0YIN7 160 aa14.86□□□□□ -0.03
CSNK1E-202ENST00000366216 TNNT2P45379 298 aaPredicted RBP14.86□□□□□ -0.03
CSNK1E-202ENST00000366216 UBR2Q8IWV8 1755 aa14.85□□□□□ -0.03
CSNK1E-202ENST00000366216 SCN7AQ01118 1682 aa14.85□□□□□ -0.03
CSNK1E-202ENST00000366216 TMEM88BA6NKF7 163 aa14.84□□□□□ -0.03
CSNK1E-202ENST00000366216 HSPA8P11142 646 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms