RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
SNX6-201ENST00000362031 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 TNNQ9UQP3 1299 aa13.86□□□□□ -0.19
SNX6-201ENST00000362031 SUPT16HQ9Y5B9 1047 aaKnown RBP13.86□□□□□ -0.19
SNX6-201ENST00000362031 LY75O60449 1722 aa13.85□□□□□ -0.19
SNX6-201ENST00000362031 HOXB7P09629 217 aa13.85□□□□□ -0.19
SNX6-201ENST00000362031 LRP10Q7Z4F1 713 aa13.85□□□□□ -0.19
SNX6-201ENST00000362031 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
SNX6-201ENST00000362031 CT47B1P0C2W7 299 aaPredicted RBP13.85□□□□□ -0.19
SNX6-201ENST00000362031 PHAXQ9H814 394 aaKnown RBP13.85□□□□□ -0.19
SNX6-201ENST00000362031 CCNL1Q9UK58 526 aaPredicted RBP13.85□□□□□ -0.19
SNX6-201ENST00000362031 MYH14Q7Z406 1995 aaKnown RBP13.84□□□□□ -0.19
SNX6-201ENST00000362031 DEFB132Q7Z7B7 95 aa13.84□□□□□ -0.19
SNX6-201ENST00000362031 AMIGO3Q86WK7 504 aa13.84□□□□□ -0.19
SNX6-201ENST00000362031 SMC4Q9NTJ3 1288 aa13.84□□□□□ -0.19
SNX6-201ENST00000362031 MYL6BP14649 208 aa13.83□□□□□ -0.2
SNX6-201ENST00000362031 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
SNX6-201ENST00000362031 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.2
SNX6-201ENST00000362031 PLSCR1O15162 318 aa13.83□□□□□ -0.2
SNX6-201ENST00000362031 TXNRD1Q16881 649 aa13.83□□□□□ -0.2
SNX6-201ENST00000362031 CCDC30Q5VVM6 783 aa13.83□□□□□ -0.2
SNX6-201ENST00000362031 ZBTB1Q9Y2K1 713 aa13.83□□□□□ -0.2
SNX6-201ENST00000362031 LAMB4A4D0S4 1761 aa13.82□□□□□ -0.2
SNX6-201ENST00000362031 EZH2Q15910 746 aaKnown RBP13.82□□□□□ -0.2
SNX6-201ENST00000362031 ALDH1L2Q3SY69 923 aa13.82□□□□□ -0.2
SNX6-201ENST00000362031 NOB1Q9ULX3 412 aaKnown RBP13.82□□□□□ -0.2
SNX6-201ENST00000362031 CRKLP46109 303 aaKnown RBP13.81□□□□□ -0.2
SNX6-201ENST00000362031 C20orf194Q5TEA3 1177 aa13.81□□□□□ -0.2
SNX6-201ENST00000362031 CAMKK2Q96RR4 588 aa13.81□□□□□ -0.2
SNX6-201ENST00000362031 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
SNX6-201ENST00000362031 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
SNX6-201ENST00000362031 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
SNX6-201ENST00000362031 RNF123Q5XPI4 1314 aa13.81□□□□□ -0.2
SNX6-201ENST00000362031 FRAT1Q92837 279 aaPredicted RBP13.81□□□□□ -0.2
SNX6-201ENST00000362031 ZNF428Q96B54 188 aa13.81□□□□□ -0.2
SNX6-201ENST00000362031 TAF1LQ8IZX4 1826 aa13.8□□□□□ -0.2
SNX6-201ENST00000362031 ZNF831Q5JPB2 1677 aa13.8□□□□□ -0.2
SNX6-201ENST00000362031 CICQ96RK0 1608 aaPredicted RBP13.8□□□□□ -0.2
SNX6-201ENST00000362031 STARD3NLO95772 234 aa13.8□□□□□ -0.2
SNX6-201ENST00000362031 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNX6-201ENST00000362031 DBF4Q9UBU7 674 aaPredicted RBP13.8□□□□□ -0.2
SNX6-201ENST00000362031 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
SNX6-201ENST00000362031 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
SNX6-201ENST00000362031 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
SNX6-201ENST00000362031 IRX6P78412 446 aaPredicted RBP13.79□□□□□ -0.2
SNX6-201ENST00000362031 UPF1Q92900 1129 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNX6-201ENST00000362031 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
SNX6-201ENST00000362031 SRCAPQ6ZRS2 3230 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 RLBP1P12271 317 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
SNX6-201ENST00000362031 FLIIQ13045 1269 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 TTLL7Q6ZT98 887 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 XAGE3Q8WTP9 111 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
SNX6-201ENST00000362031 F6X3S4 739 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 TRIM27P14373 513 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 SLC27A3Q5K4L6 730 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 COPS6Q7L5N1 327 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 CLUAP1Q96AJ1 413 aa13.78□□□□□ -0.2
SNX6-201ENST00000362031 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
SNX6-201ENST00000362031 C4BP0C0L5 1744 aa13.77□□□□□ -0.21
SNX6-201ENST00000362031 RREB1Q92766 1687 aa13.76□□□□□ -0.21
SNX6-201ENST00000362031 EIF5P55010 431 aaKnown RBP13.76□□□□□ -0.21
SNX6-201ENST00000362031 PANK1Q8TE04 598 aa13.76□□□□□ -0.21
SNX6-201ENST00000362031 HYPKQ9NX55 129 aa13.76□□□□□ -0.21
SNX6-201ENST00000362031 CNTNAP4Q9C0A0 1308 aa13.76□□□□□ -0.21
SNX6-201ENST00000362031 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
SNX6-201ENST00000362031 ADCY9O60503 1353 aa13.76□□□□□ -0.21
SNX6-201ENST00000362031 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
SNX6-201ENST00000362031 GNPATO15228 680 aa13.75□□□□□ -0.21
SNX6-201ENST00000362031 CACNA1FO60840 1977 aa13.75□□□□□ -0.21
SNX6-201ENST00000362031 PI4KAP2A4QPH2 592 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
SNX6-201ENST00000362031 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 PI4KAP1Q8N8J0 262 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 TBC1D2BQ9UPU7 963 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 RGPD3A6NKT7 1758 aaPredicted RBP13.74□□□□□ -0.21
SNX6-201ENST00000362031 RGPD4Q7Z3J3 1758 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
SNX6-201ENST00000362031 BAG6P46379 1132 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
SNX6-201ENST00000362031 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
SNX6-201ENST00000362031 ZKSCAN2Q63HK3 967 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 KIF16BQ96L93 1317 aa13.74□□□□□ -0.21
SNX6-201ENST00000362031 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
SNX6-201ENST00000362031 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
SNX6-201ENST00000362031 PHF14O94880 888 aa13.73□□□□□ -0.21
SNX6-201ENST00000362031 HLFQ16534 295 aa13.73□□□□□ -0.21
SNX6-201ENST00000362031 ARXQ96QS3 562 aa13.73□□□□□ -0.21
SNX6-201ENST00000362031 CCDC125Q86Z20 511 aa13.72□□□□□ -0.21
SNX6-201ENST00000362031 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
SNX6-201ENST00000362031 ARHGEF1Q92888 912 aaKnown RBP13.72□□□□□ -0.21
SNX6-201ENST00000362031 MAP3K2Q9Y2U5 619 aa13.72□□□□□ -0.21
SNX6-201ENST00000362031 UBR3Q6ZT12 1888 aa13.72□□□□□ -0.21
SNX6-201ENST00000362031 PTPRCP08575 1304 aa13.72□□□□□ -0.21
SNX6-201ENST00000362031 COL15A1P39059 1388 aa13.71□□□□□ -0.21
SNX6-201ENST00000362031 KSR2Q6VAB6 950 aa13.71□□□□□ -0.21
SNX6-201ENST00000362031 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms