RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 LMNB1P20700 586 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 SLC20A2Q08357 652 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 DNAJC14Q6Y2X3 702 aaPredicted RBP10.81□□□□□ -0.68
CALD1-201ENST00000361675 PMFBP1Q8TBY8 1022 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 SLC26A8Q96RN1 970 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 NCAPGQ9BPX3 1015 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 SUDS3Q9H7L9 328 aaPredicted RBP10.81□□□□□ -0.68
CALD1-201ENST00000361675 RBM28Q9NW13 759 aaKnown RBP10.81□□□□□ -0.68
CALD1-201ENST00000361675 TMEM131LA2VDJ0 1609 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 ARHGEF28Q8N1W1 1705 aaKnown RBP10.81□□□□□ -0.68
CALD1-201ENST00000361675 RHBDL3P58872 404 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 PPP2R5AQ15172 486 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 RWDD1Q9H446 243 aaPredicted RBP10.81□□□□□ -0.68
CALD1-201ENST00000361675 MINK1Q8N4C8 1332 aaPredicted RBP10.81□□□□□ -0.68
CALD1-201ENST00000361675 PREX1Q8TCU6 1659 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 ADCY5O95622 1261 aa10.81□□□□□ -0.68
CALD1-201ENST00000361675 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
CALD1-201ENST00000361675 EPB41L2O43491 1005 aaKnown RBP10.8□□□□□ -0.68
CALD1-201ENST00000361675 MYBPC2Q14324 1141 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 ZFYVE27Q5T4F4 411 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 ZKSCAN2Q63HK3 967 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 SYT10Q6XYQ8 523 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.8□□□□□ -0.68
CALD1-201ENST00000361675 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 INSRP06213 1382 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 CCDC172P0C7W6 258 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 FBLN1P23142 703 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 NOM1Q5C9Z4 860 aaKnown RBP10.8□□□□□ -0.68
CALD1-201ENST00000361675 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
CALD1-201ENST00000361675 PRAM1Q96QH2 718 aa10.8□□□□□ -0.68
CALD1-201ENST00000361675 SLFN5Q08AF3 891 aa10.79□□□□□ -0.68
CALD1-201ENST00000361675 GPS2Q13227 327 aa10.79□□□□□ -0.68
CALD1-201ENST00000361675 BIN2Q9UBW5 565 aaPredicted RBP10.79□□□□□ -0.68
CALD1-201ENST00000361675 MTHFSP49914 203 aa10.79□□□□□ -0.68
CALD1-201ENST00000361675 TPD52L1Q16890 204 aaPredicted RBP10.79□□□□□ -0.68
CALD1-201ENST00000361675 WDR78Q5VTH9 848 aa10.79□□□□□ -0.68
CALD1-201ENST00000361675 CWC15Q9P013 229 aaKnown RBP10.79□□□□□ -0.68
CALD1-201ENST00000361675 K7ELQ4 463 aaPredicted RBP10.78□□□□□ -0.68
CALD1-201ENST00000361675 HTATSF1O43719 755 aaKnown RBP10.78□□□□□ -0.68
CALD1-201ENST00000361675 MAP4K4O95819 1239 aaPredicted RBP10.78□□□□□ -0.68
CALD1-201ENST00000361675 LRSAM1Q6UWE0 723 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 WAPLQ7Z5K2 1190 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 GAS2L2Q8NHY3 880 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 LRRFIP2Q9Y608 721 aaKnown RBP10.78□□□□□ -0.68
CALD1-201ENST00000361675 CGNL1Q0VF96 1302 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 ZNF445P59923 1031 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 TRMT2AQ8IZ69 625 aaKnown RBP10.78□□□□□ -0.68
CALD1-201ENST00000361675 SYAP1Q96A49 352 aaPredicted RBP10.78□□□□□ -0.68
CALD1-201ENST00000361675 PDLIM2Q96JY6 352 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 JRKLQ9Y4A0 524 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 CASQ1P31415 396 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 NCBP1Q09161 790 aaKnown RBP10.78□□□□□ -0.68
CALD1-201ENST00000361675 RPAINQ86UA6 219 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 YY1AP1Q9H869 796 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
CALD1-201ENST00000361675 SHPRHQ149N8 1683 aa10.77□□□□□ -0.68
CALD1-201ENST00000361675 MECOMQ03112 1051 aa10.77□□□□□ -0.68
CALD1-201ENST00000361675 IRF5Q13568 498 aa10.77□□□□□ -0.68
CALD1-201ENST00000361675 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.68
CALD1-201ENST00000361675 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.68
CALD1-201ENST00000361675 PTPRMP28827 1452 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 MYO1CO00159 1063 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 CXorf38Q8TB03 319 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 SIRT1Q96EB6 747 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 MTA3Q9BTC8 594 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 GDPD2Q9HCC8 539 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 ANKRD65E5RJM6 399 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 CTR9Q6PD62 1173 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 DDX41Q9UJV9 622 aaKnown RBP10.77□□□□□ -0.69
CALD1-201ENST00000361675 NINLQ9Y2I6 1382 aa10.77□□□□□ -0.69
CALD1-201ENST00000361675 A0A1W2PP64 1363 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 ZNF853P0CG23 659 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 LRCH2Q5VUJ6 765 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 CCDC125Q86Z20 511 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 TMEM63CQ9P1W3 806 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 NUCB2P80303 420 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 PRPF38AQ8NAV1 312 aaKnown RBP10.76□□□□□ -0.69
CALD1-201ENST00000361675 LNPKQ9C0E8 428 aa10.76□□□□□ -0.69
CALD1-201ENST00000361675 POLR3AO14802 1390 aaPredicted RBP10.75□□□□□ -0.69
CALD1-201ENST00000361675 STK10O94804 968 aaKnown RBP10.75□□□□□ -0.69
CALD1-201ENST00000361675 HCLS1P14317 486 aaPredicted RBP10.75□□□□□ -0.69
CALD1-201ENST00000361675 ZNF662Q6ZS27 426 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 KIF18AQ8NI77 898 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 CLTCQ00610 1675 aaKnown RBP10.75□□□□□ -0.69
CALD1-201ENST00000361675 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 TPM3P06753 285 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 LMAN1P49257 510 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 CD163L1Q9NR16 1453 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 YTHDC2Q9H6S0 1430 aaKnown RBP10.75□□□□□ -0.69
CALD1-201ENST00000361675 MNAT1P51948 309 aa10.75□□□□□ -0.69
CALD1-201ENST00000361675 FKBP5Q13451 457 aaPredicted RBP10.75□□□□□ -0.69
CALD1-201ENST00000361675 H0YHG0 523 aa10.74□□□□□ -0.69
CALD1-201ENST00000361675 SARNPP82979 210 aaKnown RBP10.74□□□□□ -0.69
CALD1-201ENST00000361675 PKP1Q13835 747 aa10.74□□□□□ -0.69
CALD1-201ENST00000361675 U2AF1L5P0DN76 240 aaPredicted RBP10.74□□□□□ -0.69
CALD1-201ENST00000361675 U2AF1Q01081 240 aaKnown RBP eCLIP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms