RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 CCDC96Q2M329 555 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 CRACR2BQ8N4Y2 399 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-203ENST00000361391 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 THEMISQ8N1K5 641 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-203ENST00000361391 CTNNBL1Q8WYA6 563 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-203ENST00000361391 C8orf76Q96K31 380 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 SCLT1Q96NL6 688 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 NUP88Q99567 741 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-203ENST00000361391 NAPBQ9H115 298 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 EFCAB5A4FU69 1503 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 MACROD2A1Z1Q3 448 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 HAND2P61296 217 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 SPA17Q15506 151 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 SPTY2D1Q68D10 685 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-203ENST00000361391 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 CDK13Q14004 1512 aaKnown RBP9.38□□□□□ -0.91
CTNND1-203ENST00000361391 GOLGA6L7A0A1B0GV03 622 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 SFPQP23246 707 aaKnown RBP eCLIP9.38□□□□□ -0.911e-8■■■□□ 15.1
CTNND1-203ENST00000361391 CACNA2D4Q7Z3S7 1137 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 TXLNBQ8N3L3 684 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 DYDC1Q8WWB3 177 aa9.38□□□□□ -0.91
CTNND1-203ENST00000361391 TOP1P11387 765 aaKnown RBP9.37□□□□□ -0.91
CTNND1-203ENST00000361391 GJB2P29033 226 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 TMCO3Q6UWJ1 677 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 ZSCAN30Q86W11 494 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 TMOD3Q9NYL9 352 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-203ENST00000361391 KIF4BQ2VIQ3 1234 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 DZIP1Q86YF9 867 aaKnown RBP9.37□□□□□ -0.91
CTNND1-203ENST00000361391 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 HECW1Q76N89 1606 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 VAT1LQ9HCJ6 419 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 SLC12A7Q9Y666 1083 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 STARD3NLO95772 234 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 CRACR2AQ9BSW2 395 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-203ENST00000361391 TMC6Q7Z403 805 aa9.37□□□□□ -0.91
CTNND1-203ENST00000361391 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
CTNND1-203ENST00000361391 FAM83GA6ND36 823 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 GOLGA8AA7E2F4 631 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 GLRX3O76003 335 aaKnown RBP9.36□□□□□ -0.91
CTNND1-203ENST00000361391 ADAMTS2O95450 1211 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 KIF5CO60282 957 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 MAP2K1Q02750 393 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-203ENST00000361391 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
CTNND1-203ENST00000361391 HSP90AA4PQ58FG1 418 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 CAVIN4Q5BKX8 364 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 FSIP1Q8NA03 581 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 MMRN2Q9H8L6 949 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-203ENST00000361391 FBLN1P23142 703 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 TDRD12Q587J7 1177 aaKnown RBP9.36□□□□□ -0.91
CTNND1-203ENST00000361391 ANO10Q9NW15 660 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 CC2D2AQ9P2K1 1620 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 GOLIM4O00461 696 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 ZNF213O14771 459 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 NLRP5P59047 1200 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 UBE4AQ14139 1066 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 FKBP15Q5T1M5 1219 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 ZNF830Q96NB3 372 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-203ENST00000361391 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
CTNND1-203ENST00000361391 IFIT3O14879 490 aaKnown RBP9.35□□□□□ -0.91
CTNND1-203ENST00000361391 TTC16Q8NEE8 873 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 TSG101Q99816 390 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 TRMT112Q9UI30 125 aaKnown RBP9.35□□□□□ -0.91
CTNND1-203ENST00000361391 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 NKTRP30414 1462 aaKnown RBP9.35□□□□□ -0.91
CTNND1-203ENST00000361391 ZPR1O75312 459 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 ANKLE2Q86XL3 938 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 TICAM2Q86XR7 235 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 AKAP2Q9Y2D5 859 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 TOPBP1Q92547 1522 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 ATAD2Q6PL18 1390 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 EZRP15311 586 aaKnown RBP9.35□□□□□ -0.91
CTNND1-203ENST00000361391 RNF187Q5TA31 235 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-203ENST00000361391 LUZP1Q86V48 1076 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 ANXA1P04083 346 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 IFFO1Q0D2I5 559 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 VTI1AQ96AJ9 217 aa9.35□□□□□ -0.91
CTNND1-203ENST00000361391 SRRTQ9BXP5 876 aaKnown RBP9.35□□□□□ -0.91
CTNND1-203ENST00000361391 TRIM27P14373 513 aa9.34□□□□□ -0.91
CTNND1-203ENST00000361391 IFIT5Q13325 482 aaKnown RBP9.34□□□□□ -0.91
CTNND1-203ENST00000361391 ADCY5O95622 1261 aa9.34□□□□□ -0.91
CTNND1-203ENST00000361391 IGHDP01880 384 aa9.34□□□□□ -0.91
CTNND1-203ENST00000361391 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
CTNND1-203ENST00000361391 LRRC2Q9BYS8 371 aa9.34□□□□□ -0.91
CTNND1-203ENST00000361391 GSTTP1A0A1W2PQM5 241 aa9.34□□□□□ -0.91
CTNND1-203ENST00000361391 USP8P40818 1118 aa9.34□□□□□ -0.91
CTNND1-203ENST00000361391 ANAPC15P60006 121 aa9.34□□□□□ -0.91
CTNND1-203ENST00000361391 ZNF444Q8N0Y2 327 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms