RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 A1BGP04217 495 aa21.72■■□□□ 1.07
LMNA-202ENST00000361308 BRPF1P55201 1214 aaPredicted RBP21.72■■□□□ 1.07
LMNA-202ENST00000361308 TXNRD1Q16881 649 aa21.72■■□□□ 1.07
LMNA-202ENST00000361308 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
LMNA-202ENST00000361308 DDX21Q9NR30 783 aaKnown RBP eCLIP21.72■■□□□ 1.07
LMNA-202ENST00000361308 C5P01031 1676 aa21.72■■□□□ 1.07
LMNA-202ENST00000361308 ERBB4Q15303 1308 aa21.71■■□□□ 1.07
LMNA-202ENST00000361308 MYL6BP14649 208 aa21.71■■□□□ 1.07
LMNA-202ENST00000361308 HMGB2P26583 209 aaKnown RBP21.71■■□□□ 1.07
LMNA-202ENST00000361308 PDIA6Q15084 440 aa21.71■■□□□ 1.07
LMNA-202ENST00000361308 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
LMNA-202ENST00000361308 HYPKQ9NX55 129 aa21.71■■□□□ 1.07
LMNA-202ENST00000361308 ANXA1P04083 346 aa21.7■■□□□ 1.06
LMNA-202ENST00000361308 PIP4K2AP48426 406 aaPredicted RBP21.7■■□□□ 1.06
LMNA-202ENST00000361308 PROM2Q8N271 834 aa21.7■■□□□ 1.06
LMNA-202ENST00000361308 LRRC4BQ9NT99 713 aa21.7■■□□□ 1.06
LMNA-202ENST00000361308 LY75O60449 1722 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 CRKLP46109 303 aaKnown RBP21.69■■□□□ 1.06
LMNA-202ENST00000361308 BAG6P46379 1132 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 PROSER3Q2NL68 480 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
LMNA-202ENST00000361308 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 NOB1Q9ULX3 412 aaKnown RBP21.69■■□□□ 1.06
LMNA-202ENST00000361308 KIF16BQ96L93 1317 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 NBPF26B4DH59 902 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
LMNA-202ENST00000361308 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 NBPF10Q6P3W6 841 aaKnown RBP21.69■■□□□ 1.06
LMNA-202ENST00000361308 NBPF15Q8N660 670 aa21.69■■□□□ 1.06
LMNA-202ENST00000361308 ZNF831Q5JPB2 1677 aa21.68■■□□□ 1.06
LMNA-202ENST00000361308 IPO8O15397 1037 aaKnown RBP21.68■■□□□ 1.06
LMNA-202ENST00000361308 EN1Q05925 392 aaPredicted RBP21.68■■□□□ 1.06
LMNA-202ENST00000361308 CCDC87Q9NVE4 849 aa21.68■■□□□ 1.06
LMNA-202ENST00000361308 LAMB4A4D0S4 1761 aa21.68■■□□□ 1.06
LMNA-202ENST00000361308 TJP1Q07157 1748 aa21.67■■□□□ 1.06
LMNA-202ENST00000361308 TNS1Q9HBL0 1735 aaKnown RBP21.67■■□□□ 1.06
LMNA-202ENST00000361308 INTS5Q6P9B9 1019 aaKnown RBP21.67■■□□□ 1.06
LMNA-202ENST00000361308 G2E3Q7L622 706 aa21.67■■□□□ 1.06
LMNA-202ENST00000361308 PHAXQ9H814 394 aaKnown RBP21.67■■□□□ 1.06
LMNA-202ENST00000361308 ZBTB1Q9Y2K1 713 aa21.67■■□□□ 1.06
LMNA-202ENST00000361308 NPM2Q86SE8 214 aaKnown RBP21.66■■□□□ 1.06
LMNA-202ENST00000361308 CAMKK2Q96RR4 588 aa21.66■■□□□ 1.06
LMNA-202ENST00000361308 PLIN1O60240 522 aa21.66■■□□□ 1.06
LMNA-202ENST00000361308 RRP1P56182 461 aaKnown RBP21.66■■□□□ 1.06
LMNA-202ENST00000361308 FLIIQ13045 1269 aa21.66■■□□□ 1.06
LMNA-202ENST00000361308 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
LMNA-202ENST00000361308 ZKSCAN2Q63HK3 967 aa21.66■■□□□ 1.06
LMNA-202ENST00000361308 ZNF330Q9Y3S2 320 aaPredicted RBP21.66■■□□□ 1.06
LMNA-202ENST00000361308 PTPRCP08575 1304 aa21.65■■□□□ 1.06
LMNA-202ENST00000361308 CNTNAP4Q9C0A0 1308 aa21.65■■□□□ 1.06
LMNA-202ENST00000361308 EZH2Q15910 746 aaKnown RBP21.65■■□□□ 1.06
LMNA-202ENST00000361308 ARHGAP45Q92619 1136 aa21.65■■□□□ 1.06
LMNA-202ENST00000361308 CICQ96RK0 1608 aaPredicted RBP21.65■■□□□ 1.06
LMNA-202ENST00000361308 IL6STP40189 918 aaPredicted RBP21.64■■□□□ 1.06
LMNA-202ENST00000361308 AIMP1Q12904 312 aaKnown RBP21.64■■□□□ 1.06
LMNA-202ENST00000361308 FKBP5Q13451 457 aaPredicted RBP21.64■■□□□ 1.06
LMNA-202ENST00000361308 COPS6Q7L5N1 327 aa21.64■■□□□ 1.06
LMNA-202ENST00000361308 LRP10Q7Z4F1 713 aa21.64■■□□□ 1.06
LMNA-202ENST00000361308 DEFB132Q7Z7B7 95 aa21.64■■□□□ 1.06
LMNA-202ENST00000361308 RNF123Q5XPI4 1314 aa21.64■■□□□ 1.05
LMNA-202ENST00000361308 ATF7IPQ6VMQ6 1270 aa21.63■■□□□ 1.05
LMNA-202ENST00000361308 XAGE3Q8WTP9 111 aa21.63■■□□□ 1.05
LMNA-202ENST00000361308 CACNA1FO60840 1977 aa21.62■■□□□ 1.05
LMNA-202ENST00000361308 DDX58O95786 925 aaKnown RBP21.62■■□□□ 1.05
LMNA-202ENST00000361308 ILDR2Q71H61 639 aa21.62■■□□□ 1.05
LMNA-202ENST00000361308 UPF1Q92900 1129 aaKnown RBP eCLIP21.62■■□□□ 1.05
LMNA-202ENST00000361308 AK7Q96M32 723 aa21.62■■□□□ 1.05
LMNA-202ENST00000361308 API5Q9BZZ5 524 aaKnown RBP21.62■■□□□ 1.05
LMNA-202ENST00000361308 ARXQ96QS3 562 aa21.61■■□□□ 1.05
LMNA-202ENST00000361308 GNPATO15228 680 aa21.6■■□□□ 1.05
LMNA-202ENST00000361308 RPS6KA4O75676 772 aa21.6■■□□□ 1.05
LMNA-202ENST00000361308 TRIM27P14373 513 aa21.6■■□□□ 1.05
LMNA-202ENST00000361308 EIF5P55010 431 aaKnown RBP21.6■■□□□ 1.05
LMNA-202ENST00000361308 RTCBQ9Y3I0 505 aaKnown RBP21.6■■□□□ 1.05
LMNA-202ENST00000361308 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
LMNA-202ENST00000361308 MS4A1P11836 297 aa21.6■■□□□ 1.05
LMNA-202ENST00000361308 ANKRD13DQ6ZTN6 518 aa21.6■■□□□ 1.05
LMNA-202ENST00000361308 CLUAP1Q96AJ1 413 aa21.6■■□□□ 1.05
LMNA-202ENST00000361308 RGPD3A6NKT7 1758 aaPredicted RBP21.59■■□□□ 1.05
LMNA-202ENST00000361308 RGPD4Q7Z3J3 1758 aa21.59■■□□□ 1.05
LMNA-202ENST00000361308 PI4KAP2A4QPH2 592 aa21.58■■□□□ 1.05
LMNA-202ENST00000361308 KSR2Q6VAB6 950 aa21.58■■□□□ 1.05
LMNA-202ENST00000361308 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
LMNA-202ENST00000361308 PI4KAP1Q8N8J0 262 aa21.58■■□□□ 1.05
LMNA-202ENST00000361308 TAF1LQ8IZX4 1826 aa21.58■■□□□ 1.05
LMNA-202ENST00000361308 MYH14Q7Z406 1995 aaKnown RBP21.58■■□□□ 1.04
LMNA-202ENST00000361308 KIF6Q6ZMV9 814 aa21.58■■□□□ 1.04
LMNA-202ENST00000361308 TTLL7Q6ZT98 887 aa21.58■■□□□ 1.04
LMNA-202ENST00000361308 RIC3Q7Z5B4 369 aa21.58■■□□□ 1.04
LMNA-202ENST00000361308 DZIP1LQ8IYY4 767 aaKnown RBP21.58■■□□□ 1.04
LMNA-202ENST00000361308 C4BP0C0L5 1744 aa21.57■■□□□ 1.04
LMNA-202ENST00000361308 F6X3S4 739 aa21.57■■□□□ 1.04
LMNA-202ENST00000361308 PDE3AQ14432 1141 aa21.57■■□□□ 1.04
LMNA-202ENST00000361308 A0A087WZG4 1122 aa21.56■■□□□ 1.04
LMNA-202ENST00000361308 DZIP3Q86Y13 1208 aaKnown RBP21.56■■□□□ 1.04
LMNA-202ENST00000361308 PLBD2Q8NHP8 589 aa21.56■■□□□ 1.04
LMNA-202ENST00000361308 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
LMNA-202ENST00000361308 TNNQ9UQP3 1299 aa21.56■■□□□ 1.04
LMNA-202ENST00000361308 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
LMNA-202ENST00000361308 TRAPPC3LQ5T215 181 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms