RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 A1BGP04217 495 aa19.18■□□□□ 0.66
CCNE1-202ENST00000357943 CRKLP46109 303 aaKnown RBP19.18■□□□□ 0.66
CCNE1-202ENST00000357943 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
CCNE1-202ENST00000357943 SOS1Q07889 1333 aaPredicted RBP19.17■□□□□ 0.66
CCNE1-202ENST00000357943 INTS5Q6P9B9 1019 aaKnown RBP19.16■□□□□ 0.66
CCNE1-202ENST00000357943 ZBTB1Q9Y2K1 713 aa19.16■□□□□ 0.66
CCNE1-202ENST00000357943 COL5A3P25940 1745 aaPredicted RBP19.16■□□□□ 0.66
CCNE1-202ENST00000357943 RREB1Q92766 1687 aa19.15■□□□□ 0.66
CCNE1-202ENST00000357943 TAF1LQ8IZX4 1826 aa19.15■□□□□ 0.66
CCNE1-202ENST00000357943 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
CCNE1-202ENST00000357943 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
CCNE1-202ENST00000357943 LAMB4A4D0S4 1761 aa19.15■□□□□ 0.66
CCNE1-202ENST00000357943 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.66
CCNE1-202ENST00000357943 CCDC87Q9NVE4 849 aa19.14■□□□□ 0.66
CCNE1-202ENST00000357943 C4BP0C0L5 1744 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 NBPF26B4DH59 902 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 ANXA1P04083 346 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 CT47B1P0C2W7 299 aaPredicted RBP19.14■□□□□ 0.65
CCNE1-202ENST00000357943 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.65
CCNE1-202ENST00000357943 PDIA6Q15084 440 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 ZNF827Q17R98 1081 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 RC3H1Q5TC82 1133 aaKnown RBP19.14■□□□□ 0.65
CCNE1-202ENST00000357943 NBPF14Q5TI25 921 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 CCDC30Q5VVM6 783 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 NBPF10Q6P3W6 841 aaKnown RBP19.14■□□□□ 0.65
CCNE1-202ENST00000357943 NBPF15Q8N660 670 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 CHPF2Q9P2E5 772 aa19.14■□□□□ 0.65
CCNE1-202ENST00000357943 PROSER3Q2NL68 480 aa19.13■□□□□ 0.65
CCNE1-202ENST00000357943 SMIM5Q71RC9 77 aa19.13■□□□□ 0.65
CCNE1-202ENST00000357943 AMIGO3Q86WK7 504 aa19.13■□□□□ 0.65
CCNE1-202ENST00000357943 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
CCNE1-202ENST00000357943 MYH14Q7Z406 1995 aaKnown RBP19.13■□□□□ 0.65
CCNE1-202ENST00000357943 GNPATO15228 680 aa19.12■□□□□ 0.65
CCNE1-202ENST00000357943 MYL6BP14649 208 aa19.12■□□□□ 0.65
CCNE1-202ENST00000357943 AK7Q96M32 723 aa19.12■□□□□ 0.65
CCNE1-202ENST00000357943 NUP188Q5SRE5 1749 aa19.12■□□□□ 0.65
CCNE1-202ENST00000357943 DBF4Q9UBU7 674 aaPredicted RBP19.11■□□□□ 0.65
CCNE1-202ENST00000357943 SOCS7O14512 581 aa19.11■□□□□ 0.65
CCNE1-202ENST00000357943 HMGB2P26583 209 aaKnown RBP19.11■□□□□ 0.65
CCNE1-202ENST00000357943 LRP10Q7Z4F1 713 aa19.11■□□□□ 0.65
CCNE1-202ENST00000357943 SSH1Q8WYL5 1049 aa19.11■□□□□ 0.65
CCNE1-202ENST00000357943 BCL2L13Q9BXK5 485 aa19.11■□□□□ 0.65
CCNE1-202ENST00000357943 DDX21Q9NR30 783 aaKnown RBP eCLIP19.11■□□□□ 0.65
CCNE1-202ENST00000357943 ZNF330Q9Y3S2 320 aaPredicted RBP19.11■□□□□ 0.65
CCNE1-202ENST00000357943 ERBB4Q15303 1308 aa19.1■□□□□ 0.65
CCNE1-202ENST00000357943 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
CCNE1-202ENST00000357943 RARSP54136 660 aaKnown RBP19.1■□□□□ 0.65
CCNE1-202ENST00000357943 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
CCNE1-202ENST00000357943 STK31Q9BXU1 1019 aa19.1■□□□□ 0.65
CCNE1-202ENST00000357943 CHMP4AQ9BY43 222 aa19.1■□□□□ 0.65
CCNE1-202ENST00000357943 RPS6KA4O75676 772 aa19.09■□□□□ 0.65
CCNE1-202ENST00000357943 IL6STP40189 918 aaPredicted RBP19.09■□□□□ 0.65
CCNE1-202ENST00000357943 EIF5P55010 431 aaKnown RBP19.09■□□□□ 0.65
CCNE1-202ENST00000357943 SLC15A2Q16348 729 aa19.09■□□□□ 0.65
CCNE1-202ENST00000357943 TFCP2L1Q9NZI6 479 aa19.09■□□□□ 0.65
CCNE1-202ENST00000357943 RTCBQ9Y3I0 505 aaKnown RBP19.09■□□□□ 0.65
CCNE1-202ENST00000357943 PHF14O94880 888 aa19.08■□□□□ 0.65
CCNE1-202ENST00000357943 ALDH1L2Q3SY69 923 aa19.07■□□□□ 0.64
CCNE1-202ENST00000357943 PHAXQ9H814 394 aaKnown RBP19.07■□□□□ 0.64
CCNE1-202ENST00000357943 STK32BQ9NY57 414 aa19.07■□□□□ 0.64
CCNE1-202ENST00000357943 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
CCNE1-202ENST00000357943 SMC4Q9NTJ3 1288 aa19.07■□□□□ 0.64
CCNE1-202ENST00000357943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
CCNE1-202ENST00000357943 BCAR3O75815 825 aa19.06■□□□□ 0.64
CCNE1-202ENST00000357943 G2E3Q7L622 706 aa19.06■□□□□ 0.64
CCNE1-202ENST00000357943 MRPL50Q8N5N7 158 aaKnown RBP19.06■□□□□ 0.64
CCNE1-202ENST00000357943 HYPKQ9NX55 129 aa19.06■□□□□ 0.64
CCNE1-202ENST00000357943 COL15A1P39059 1388 aa19.05■□□□□ 0.64
CCNE1-202ENST00000357943 SSFA2P28290 1259 aa19.05■□□□□ 0.64
CCNE1-202ENST00000357943 AIMP1Q12904 312 aaKnown RBP19.05■□□□□ 0.64
CCNE1-202ENST00000357943 ARHGEF1Q92888 912 aaKnown RBP19.05■□□□□ 0.64
CCNE1-202ENST00000357943 RCAN3Q9UKA8 241 aa19.05■□□□□ 0.64
CCNE1-202ENST00000357943 TRAPPC3LQ5T215 181 aa19.04■□□□□ 0.64
CCNE1-202ENST00000357943 TTLL7Q6ZT98 887 aa19.04■□□□□ 0.64
CCNE1-202ENST00000357943 COPS6Q7L5N1 327 aa19.04■□□□□ 0.64
CCNE1-202ENST00000357943 XAGE3Q8WTP9 111 aa19.04■□□□□ 0.64
CCNE1-202ENST00000357943 ARXQ96QS3 562 aa19.04■□□□□ 0.64
CCNE1-202ENST00000357943 UBR3Q6ZT12 1888 aa19.04■□□□□ 0.64
CCNE1-202ENST00000357943 PNPLA7Q6ZV29 1317 aa19.04■□□□□ 0.64
CCNE1-202ENST00000357943 NPM2Q86SE8 214 aaKnown RBP19.03■□□□□ 0.64
CCNE1-202ENST00000357943 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
CCNE1-202ENST00000357943 FLIIQ13045 1269 aa19.03■□□□□ 0.64
CCNE1-202ENST00000357943 COL23A1Q86Y22 540 aaPredicted RBP19.03■□□□□ 0.64
CCNE1-202ENST00000357943 ADRA2BP18089 450 aa19.02■□□□□ 0.64
CCNE1-202ENST00000357943 DZIP3Q86Y13 1208 aaKnown RBP19.02■□□□□ 0.64
CCNE1-202ENST00000357943 BRPF1P55201 1214 aaPredicted RBP19.01■□□□□ 0.63
CCNE1-202ENST00000357943 PDGFDQ9GZP0 370 aaPredicted RBP19.01■□□□□ 0.63
CCNE1-202ENST00000357943 TUBGCP6Q96RT7 1819 aa19.01■□□□□ 0.63
CCNE1-202ENST00000357943 RFC4P35249 363 aa19■□□□□ 0.63
CCNE1-202ENST00000357943 R3HDM1Q15032 1099 aaKnown RBP19■□□□□ 0.63
CCNE1-202ENST00000357943 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
CCNE1-202ENST00000357943 A0A087WZG4 1122 aa19■□□□□ 0.63
CCNE1-202ENST00000357943 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
CCNE1-202ENST00000357943 FLAD1Q8NFF5 587 aa19■□□□□ 0.63
CCNE1-202ENST00000357943 ZBTB3Q9H5J0 574 aa19■□□□□ 0.63
CCNE1-202ENST00000357943 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
CCNE1-202ENST00000357943 MSH5O43196 834 aa18.99■□□□□ 0.63
CCNE1-202ENST00000357943 CAMTA2O94983 1202 aa18.99■□□□□ 0.63
CCNE1-202ENST00000357943 KIF6Q6ZMV9 814 aa18.99■□□□□ 0.63
CCNE1-202ENST00000357943 ANKRD13DQ6ZTN6 518 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms