RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
USP6-202ENST00000357482 LRP5O75197 1615 aa18.1■□□□□ 0.49
USP6-202ENST00000357482 MYRIPQ8NFW9 859 aa18.1■□□□□ 0.49
USP6-202ENST00000357482 RAPGEF4Q8WZA2 1011 aa18.1■□□□□ 0.49
USP6-202ENST00000357482 PRIMPOLQ96LW4 560 aa18.1■□□□□ 0.49
USP6-202ENST00000357482 NHSQ6T4R5 1651 aa18.09■□□□□ 0.49
USP6-202ENST00000357482 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
USP6-202ENST00000357482 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
USP6-202ENST00000357482 SRCAPQ6ZRS2 3230 aa18.09■□□□□ 0.49
USP6-202ENST00000357482 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.49
USP6-202ENST00000357482 MEGF6O75095 1541 aa18.08■□□□□ 0.48
USP6-202ENST00000357482 GTF2F1P35269 517 aaKnown RBP eCLIP18.08■□□□□ 0.48
USP6-202ENST00000357482 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
USP6-202ENST00000357482 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
USP6-202ENST00000357482 TBC1D2Q9BYX2 928 aa18.08■□□□□ 0.48
USP6-202ENST00000357482 TATP17735 454 aaPredicted RBP18.07■□□□□ 0.48
USP6-202ENST00000357482 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
USP6-202ENST00000357482 NPC1L1Q9UHC9 1359 aa18.06■□□□□ 0.48
USP6-202ENST00000357482 GBP4Q96PP9 640 aa18.06■□□□□ 0.48
USP6-202ENST00000357482 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
USP6-202ENST00000357482 IRX5P78411 483 aaPredicted RBP18.06■□□□□ 0.48
USP6-202ENST00000357482 GABPB1Q06547 395 aaPredicted RBP18.06■□□□□ 0.48
USP6-202ENST00000357482 PROM2Q8N271 834 aa18.06■□□□□ 0.48
USP6-202ENST00000357482 ZKSCAN5Q9Y2L8 839 aa18.06■□□□□ 0.48
USP6-202ENST00000357482 KAT6BQ8WYB5 2073 aa18.05■□□□□ 0.48
USP6-202ENST00000357482 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
USP6-202ENST00000357482 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
USP6-202ENST00000357482 CBX1P83916 185 aa18.04■□□□□ 0.48
USP6-202ENST00000357482 ZNF622Q969S3 477 aaKnown RBP eCLIP18.04■□□□□ 0.48
USP6-202ENST00000357482 TBC1D32Q96NH3 1257 aa18.04■□□□□ 0.48
USP6-202ENST00000357482 FEZ1Q99689 392 aa18.04■□□□□ 0.48
USP6-202ENST00000357482 SKAP1Q86WV1 359 aa18.04■□□□□ 0.48
USP6-202ENST00000357482 GAS2L3Q86XJ1 694 aa18.04■□□□□ 0.48
USP6-202ENST00000357482 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
USP6-202ENST00000357482 ANKRD26Q9UPS8 1709 aa18.04■□□□□ 0.48
USP6-202ENST00000357482 BTAF1O14981 1849 aa18.03■□□□□ 0.48
USP6-202ENST00000357482 FAM193AP78312 1265 aa18.03■□□□□ 0.48
USP6-202ENST00000357482 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
USP6-202ENST00000357482 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
USP6-202ENST00000357482 MAP2P11137 1827 aaKnown RBP18.02■□□□□ 0.48
USP6-202ENST00000357482 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
USP6-202ENST00000357482 PDLIM2Q96JY6 352 aa18.02■□□□□ 0.48
USP6-202ENST00000357482 GEMIN8Q9NWZ8 242 aaKnown RBP18.02■□□□□ 0.48
USP6-202ENST00000357482 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.47
USP6-202ENST00000357482 KIF3AQ9Y496 699 aa18.02■□□□□ 0.47
USP6-202ENST00000357482 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
USP6-202ENST00000357482 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
USP6-202ENST00000357482 ZNF771Q7L3S4 317 aaPredicted RBP18■□□□□ 0.47
USP6-202ENST00000357482 TIGD1Q96MW7 591 aa18■□□□□ 0.47
USP6-202ENST00000357482 CCDC39Q9UFE4 941 aa18■□□□□ 0.47
USP6-202ENST00000357482 NSD2O96028 1365 aa18■□□□□ 0.47
USP6-202ENST00000357482 SHANK3Q9BYB0 1731 aa18■□□□□ 0.47
USP6-202ENST00000357482 PCDH11XQ9BZA7 1347 aa18■□□□□ 0.47
USP6-202ENST00000357482 PCDH11YQ9BZA8 1340 aa18■□□□□ 0.47
USP6-202ENST00000357482 SPON1Q9HCB6 807 aa18■□□□□ 0.47
USP6-202ENST00000357482 PPP1R1BQ9UD71 204 aaPredicted RBP18■□□□□ 0.47
USP6-202ENST00000357482 SLC15A2Q16348 729 aa17.98■□□□□ 0.47
USP6-202ENST00000357482 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
USP6-202ENST00000357482 EYA1Q99502 592 aa17.98■□□□□ 0.47
USP6-202ENST00000357482 KCNJ4P48050 445 aa17.97■□□□□ 0.47
USP6-202ENST00000357482 PPP2R1AP30153 589 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 EIF4A2Q14240 407 aaKnown RBP17.96■□□□□ 0.47
USP6-202ENST00000357482 CREBRFQ8IUR6 639 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 ARID3AQ99856 593 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 HDAC5Q9UQL6 1122 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 TULP2O00295 520 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.96■□□□□ 0.47
USP6-202ENST00000357482 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 SPG7Q9UQ90 795 aa17.96■□□□□ 0.47
USP6-202ENST00000357482 PLIN1O60240 522 aa17.95■□□□□ 0.46
USP6-202ENST00000357482 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
USP6-202ENST00000357482 PDGFDQ9GZP0 370 aaPredicted RBP17.95■□□□□ 0.46
USP6-202ENST00000357482 ZNF445P59923 1031 aa17.94■□□□□ 0.46
USP6-202ENST00000357482 ATP2B3Q16720 1220 aa17.94■□□□□ 0.46
USP6-202ENST00000357482 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
USP6-202ENST00000357482 OGFRQ9NZT2 677 aa17.94■□□□□ 0.46
USP6-202ENST00000357482 CYP27B1O15528 508 aa17.94■□□□□ 0.46
USP6-202ENST00000357482 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
USP6-202ENST00000357482 GOLGA6L22H0YM25 854 aa17.93■□□□□ 0.46
USP6-202ENST00000357482 PTMAP06454 111 aaKnown RBP17.93■□□□□ 0.46
USP6-202ENST00000357482 KCNQ4P56696 695 aa17.93■□□□□ 0.46
USP6-202ENST00000357482 CASZ1Q86V15 1759 aa17.93■□□□□ 0.46
USP6-202ENST00000357482 PSEN1P49768 467 aa17.92■□□□□ 0.46
USP6-202ENST00000357482 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
USP6-202ENST00000357482 ZNF710Q8N1W2 664 aa17.92■□□□□ 0.46
USP6-202ENST00000357482 ATF5Q9Y2D1 282 aaPredicted RBP17.92■□□□□ 0.46
USP6-202ENST00000357482 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
USP6-202ENST00000357482 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
USP6-202ENST00000357482 PDCL2Q8N4E4 241 aa17.92■□□□□ 0.46
USP6-202ENST00000357482 DDIT3P35638 169 aa17.91■□□□□ 0.46
USP6-202ENST00000357482 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
USP6-202ENST00000357482 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
USP6-202ENST00000357482 APPP05067 770 aa17.9■□□□□ 0.46
USP6-202ENST00000357482 PAPPAQ13219 1627 aa17.9■□□□□ 0.46
USP6-202ENST00000357482 KIAA2012Q0VF49 1180 aa17.9■□□□□ 0.46
USP6-202ENST00000357482 KLHL40Q2TBA0 621 aa17.9■□□□□ 0.46
USP6-202ENST00000357482 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
USP6-202ENST00000357482 ZBTB22O15209 634 aa17.88■□□□□ 0.45
USP6-202ENST00000357482 SEC24BO95487 1268 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms