RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 CUL5Q93034 780 aa16.07■□□□□ 0.16
SMARCA2-204ENST00000357248 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
SMARCA2-204ENST00000357248 TTLL12Q14166 644 aaPredicted RBP16.07■□□□□ 0.16
SMARCA2-204ENST00000357248 ARHGAP5Q13017 1502 aa16.07■□□□□ 0.16
SMARCA2-204ENST00000357248 DDX23Q9BUQ8 820 aaKnown RBP16.07■□□□□ 0.16
SMARCA2-204ENST00000357248 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 FERP16591 822 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 ADAMTS8Q9UP79 889 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 FGFR1OPO95684 399 aaKnown RBP16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 MKNK2Q9HBH9 465 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 UQCRHLA0A096LP55 91 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 UQCRHP07919 91 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 ERICH4A6NGS2 130 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
SMARCA2-204ENST00000357248 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 EHMT1Q9H9B1 1298 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 SRGAP3O43295 1099 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 MCM3P25205 808 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 SULT6B1Q6IMI4 303 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 ZSCAN12O43309 604 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 SSX2IPQ9Y2D8 614 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 C11orf95C9JLR9 678 aaPredicted RBP16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 KIF20AO95235 890 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 SPATA24Q86W54 205 aa16.05■□□□□ 0.16
SMARCA2-204ENST00000357248 KIF5CO60282 957 aa16.04■□□□□ 0.16
SMARCA2-204ENST00000357248 TMEM266Q2M3C6 531 aa16.04■□□□□ 0.16
SMARCA2-204ENST00000357248 TAOK3Q9H2K8 898 aa16.04■□□□□ 0.16
SMARCA2-204ENST00000357248 CCDC96Q2M329 555 aa16.04■□□□□ 0.16
SMARCA2-204ENST00000357248 TSNARE1Q96NA8 513 aa16.04■□□□□ 0.16
SMARCA2-204ENST00000357248 KIF2AO00139 706 aaPredicted RBP16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 PRDM11Q9NQV5 511 aa16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 FERMT1Q9BQL6 677 aa16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 LIG1P18858 919 aa16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 DDX11Q96FC9 970 aa16.03■□□□□ 0.16
SMARCA2-204ENST00000357248 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 PAFAH1B1P43034 410 aa16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 METTL24Q5JXM2 366 aa16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 BCCIPQ9P287 314 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 SFPQP23246 707 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 CETN1Q12798 172 aa16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 CASQ1P31415 396 aa16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
SMARCA2-204ENST00000357248 KLHL10Q6JEL2 608 aa16.02■□□□□ 0.15
SMARCA2-204ENST00000357248 GRPEL1Q9HAV7 217 aa16.02■□□□□ 0.15
SMARCA2-204ENST00000357248 TICAM2Q86XR7 235 aa16.02■□□□□ 0.15
SMARCA2-204ENST00000357248 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 DNA2P51530 1060 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 CCDC196A0A1B0GTZ2 297 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 STARD3NLO95772 234 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 CCDC175P0C221 793 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 TDRD12Q587J7 1177 aaKnown RBP16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 SPECC1Q5M775 1068 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 MICALCLQ6ZW33 695 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 PDCL2Q8N4E4 241 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 AKAP2Q9Y2D5 859 aa16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 POLR1AO95602 1720 aaPredicted RBP16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 PUS7Q96PZ0 661 aaKnown RBP16.01■□□□□ 0.15
SMARCA2-204ENST00000357248 TNNT1P13805 278 aa16■□□□□ 0.15
SMARCA2-204ENST00000357248 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
SMARCA2-204ENST00000357248 FSD2A1L4K1 749 aa16■□□□□ 0.15
SMARCA2-204ENST00000357248 DZIP1Q86YF9 867 aaKnown RBP16■□□□□ 0.15
SMARCA2-204ENST00000357248 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
SMARCA2-204ENST00000357248 IFIT1P09914 478 aaKnown RBP16■□□□□ 0.15
SMARCA2-204ENST00000357248 ZPR1O75312 459 aa15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 BCAR3O75815 825 aa15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 RNF187Q5TA31 235 aaPredicted RBP15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 ZNF444Q8N0Y2 327 aaPredicted RBP15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 CASTP20810 708 aaKnown RBP15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 BAG4O95429 457 aaKnown RBP15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 PTPN14Q15678 1187 aa15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 PRAM1Q96QH2 718 aa15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
SMARCA2-204ENST00000357248 PREX2Q70Z35 1606 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 C6orf163Q5TEZ5 329 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 IL1RAPL2Q9NP60 686 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 WDR70Q9NW82 654 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 TOP1P11387 765 aaKnown RBP15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 CAMK4Q16566 473 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 CCDC83Q8IWF9 413 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 ANO10Q9NW15 660 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 NUP88Q99567 741 aaPredicted RBP15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 NAA15Q9BXJ9 866 aaKnown RBP15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 NAPBQ9H115 298 aa15.98■□□□□ 0.15
SMARCA2-204ENST00000357248 YEATS4O95619 227 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms