RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 C8orf58Q8NAV2 365 aa20.09■□□□□ 0.81
TRIM13-201ENST00000356017 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
TRIM13-201ENST00000356017 CCDC87Q9NVE4 849 aa20.09■□□□□ 0.81
TRIM13-201ENST00000356017 C5P01031 1676 aa20.09■□□□□ 0.81
TRIM13-201ENST00000356017 NUP188Q5SRE5 1749 aa20.08■□□□□ 0.8
TRIM13-201ENST00000356017 TJP1Q07157 1748 aa20.07■□□□□ 0.8
TRIM13-201ENST00000356017 ELL2O00472 640 aaPredicted RBP20.07■□□□□ 0.8
TRIM13-201ENST00000356017 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
TRIM13-201ENST00000356017 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
TRIM13-201ENST00000356017 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
TRIM13-201ENST00000356017 TFCP2L1Q9NZI6 479 aa20.07■□□□□ 0.8
TRIM13-201ENST00000356017 EIF2S2P20042 333 aaKnown RBP20.06■□□□□ 0.8
TRIM13-201ENST00000356017 INTS5Q6P9B9 1019 aaKnown RBP20.06■□□□□ 0.8
TRIM13-201ENST00000356017 RTCBQ9Y3I0 505 aaKnown RBP20.06■□□□□ 0.8
TRIM13-201ENST00000356017 C4BP0C0L5 1744 aa20.06■□□□□ 0.8
TRIM13-201ENST00000356017 TAF1LQ8IZX4 1826 aa20.06■□□□□ 0.8
TRIM13-201ENST00000356017 GNPATO15228 680 aa20.05■□□□□ 0.8
TRIM13-201ENST00000356017 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
TRIM13-201ENST00000356017 HDGFL1Q5TGJ6 251 aa20.05■□□□□ 0.8
TRIM13-201ENST00000356017 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
TRIM13-201ENST00000356017 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
TRIM13-201ENST00000356017 COL5A3P25940 1745 aaPredicted RBP20.05■□□□□ 0.8
TRIM13-201ENST00000356017 RPS6KA4O75676 772 aa20.05■□□□□ 0.8
TRIM13-201ENST00000356017 TSPYL6Q8N831 410 aa20.05■□□□□ 0.8
TRIM13-201ENST00000356017 FLAD1Q8NFF5 587 aa20.05■□□□□ 0.8
TRIM13-201ENST00000356017 A1BGP04217 495 aa20.04■□□□□ 0.8
TRIM13-201ENST00000356017 SSFA2P28290 1259 aa20.04■□□□□ 0.8
TRIM13-201ENST00000356017 NPM2Q86SE8 214 aaKnown RBP20.04■□□□□ 0.8
TRIM13-201ENST00000356017 ZBTB1Q9Y2K1 713 aa20.04■□□□□ 0.8
TRIM13-201ENST00000356017 CANXP27824 592 aaKnown RBP20.03■□□□□ 0.8
TRIM13-201ENST00000356017 IL6STP40189 918 aaPredicted RBP20.03■□□□□ 0.8
TRIM13-201ENST00000356017 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
TRIM13-201ENST00000356017 VAMP4O75379 141 aa20.02■□□□□ 0.8
TRIM13-201ENST00000356017 CT47B1P0C2W7 299 aaPredicted RBP20.02■□□□□ 0.8
TRIM13-201ENST00000356017 ADRA2BP18089 450 aa20.02■□□□□ 0.8
TRIM13-201ENST00000356017 DBF4Q9UBU7 674 aaPredicted RBP20.02■□□□□ 0.79
TRIM13-201ENST00000356017 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
TRIM13-201ENST00000356017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.01■□□□□ 0.79
TRIM13-201ENST00000356017 TRAPPC3LQ5T215 181 aa20.01■□□□□ 0.79
TRIM13-201ENST00000356017 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
TRIM13-201ENST00000356017 ZNF428Q96B54 188 aa20.01■□□□□ 0.79
TRIM13-201ENST00000356017 EIF5P55010 431 aaKnown RBP20■□□□□ 0.79
TRIM13-201ENST00000356017 DDX21Q9NR30 783 aaKnown RBP eCLIP20■□□□□ 0.79
TRIM13-201ENST00000356017 A0A087WZG4 1122 aa19.99■□□□□ 0.79
TRIM13-201ENST00000356017 NBPF26B4DH59 902 aa19.99■□□□□ 0.79
TRIM13-201ENST00000356017 PHF14O94880 888 aa19.99■□□□□ 0.79
TRIM13-201ENST00000356017 R3HDM1Q15032 1099 aaKnown RBP19.99■□□□□ 0.79
TRIM13-201ENST00000356017 NBPF10Q6P3W6 841 aaKnown RBP19.99■□□□□ 0.79
TRIM13-201ENST00000356017 NBPF15Q8N660 670 aa19.99■□□□□ 0.79
TRIM13-201ENST00000356017 STK31Q9BXU1 1019 aa19.99■□□□□ 0.79
TRIM13-201ENST00000356017 PNPLA7Q6ZV29 1317 aa19.99■□□□□ 0.79
TRIM13-201ENST00000356017 PDIA6Q15084 440 aa19.98■□□□□ 0.79
TRIM13-201ENST00000356017 ZNF330Q9Y3S2 320 aaPredicted RBP19.98■□□□□ 0.79
TRIM13-201ENST00000356017 MYL6BP14649 208 aa19.98■□□□□ 0.79
TRIM13-201ENST00000356017 RFC4P35249 363 aa19.98■□□□□ 0.79
TRIM13-201ENST00000356017 HYPKQ9NX55 129 aa19.98■□□□□ 0.79
TRIM13-201ENST00000356017 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
TRIM13-201ENST00000356017 MYH14Q7Z406 1995 aaKnown RBP19.97■□□□□ 0.79
TRIM13-201ENST00000356017 COL15A1P39059 1388 aa19.97■□□□□ 0.79
TRIM13-201ENST00000356017 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
TRIM13-201ENST00000356017 ARHGEF1Q92888 912 aaKnown RBP19.97■□□□□ 0.79
TRIM13-201ENST00000356017 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
TRIM13-201ENST00000356017 MSH5O43196 834 aa19.95■□□□□ 0.78
TRIM13-201ENST00000356017 COL23A1Q86Y22 540 aaPredicted RBP19.95■□□□□ 0.78
TRIM13-201ENST00000356017 UBR3Q6ZT12 1888 aa19.95■□□□□ 0.78
TRIM13-201ENST00000356017 SLC16A10Q8TF71 515 aa19.94■□□□□ 0.78
TRIM13-201ENST00000356017 PSDA5PKW4 1024 aaPredicted RBP19.94■□□□□ 0.78
TRIM13-201ENST00000356017 ZPR1O75312 459 aa19.94■□□□□ 0.78
TRIM13-201ENST00000356017 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
TRIM13-201ENST00000356017 PROSER3Q2NL68 480 aa19.94■□□□□ 0.78
TRIM13-201ENST00000356017 LRP10Q7Z4F1 713 aa19.94■□□□□ 0.78
TRIM13-201ENST00000356017 ARXQ96QS3 562 aa19.94■□□□□ 0.78
TRIM13-201ENST00000356017 ALDH1L2Q3SY69 923 aa19.93■□□□□ 0.78
TRIM13-201ENST00000356017 SMIM5Q71RC9 77 aa19.93■□□□□ 0.78
TRIM13-201ENST00000356017 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
TRIM13-201ENST00000356017 NARFQ9UHQ1 456 aa19.93■□□□□ 0.78
TRIM13-201ENST00000356017 QSER1Q2KHR3 1735 aa19.93■□□□□ 0.78
TRIM13-201ENST00000356017 ANXA1P04083 346 aa19.92■□□□□ 0.78
TRIM13-201ENST00000356017 USP42Q9H9J4 1324 aaKnown RBP19.92■□□□□ 0.78
TRIM13-201ENST00000356017 KIF6Q6ZMV9 814 aa19.91■□□□□ 0.78
TRIM13-201ENST00000356017 COPS6Q7L5N1 327 aa19.91■□□□□ 0.78
TRIM13-201ENST00000356017 TBC1D2BQ9UPU7 963 aa19.91■□□□□ 0.78
TRIM13-201ENST00000356017 TCERG1O14776 1098 aaKnown RBP19.91■□□□□ 0.78
TRIM13-201ENST00000356017 RGL2O15211 777 aa19.91■□□□□ 0.78
TRIM13-201ENST00000356017 XAGE3Q8WTP9 111 aa19.91■□□□□ 0.78
TRIM13-201ENST00000356017 ERVV-1B6SEH8 477 aa19.9■□□□□ 0.78
TRIM13-201ENST00000356017 AIMP1Q12904 312 aaKnown RBP19.9■□□□□ 0.78
TRIM13-201ENST00000356017 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.77
TRIM13-201ENST00000356017 SSH1Q8WYL5 1049 aa19.89■□□□□ 0.77
TRIM13-201ENST00000356017 TUBGCP6Q96RT7 1819 aa19.89■□□□□ 0.77
TRIM13-201ENST00000356017 CAMTA2O94983 1202 aa19.88■□□□□ 0.77
TRIM13-201ENST00000356017 DDX58O95786 925 aaKnown RBP19.88■□□□□ 0.77
TRIM13-201ENST00000356017 USPL1Q5W0Q7 1092 aa19.88■□□□□ 0.77
TRIM13-201ENST00000356017 CLEC4GQ6UXB4 293 aa19.88■□□□□ 0.77
TRIM13-201ENST00000356017 PDGFDQ9GZP0 370 aaPredicted RBP19.88■□□□□ 0.77
TRIM13-201ENST00000356017 PHAXQ9H814 394 aaKnown RBP19.88■□□□□ 0.77
TRIM13-201ENST00000356017 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
TRIM13-201ENST00000356017 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
TRIM13-201ENST00000356017 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
TRIM13-201ENST00000356017 RARSP54136 660 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms