RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ARID3CA6NKF2 412 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 CCDC172P0C7W6 258 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 GSCP56915 257 aaPredicted RBP9.12□□□□□ -0.95
CCR9-201ENST00000355983 RPAP2Q8IXW5 612 aaPredicted RBP9.12□□□□□ -0.95
CCR9-201ENST00000355983 MSL3Q8N5Y2 521 aaKnown RBP9.12□□□□□ -0.95
CCR9-201ENST00000355983 MNS1Q8NEH6 495 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 MRFAP1L1Q96HT8 127 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
CCR9-201ENST00000355983 JRKLQ9Y4A0 524 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 EFCAB6Q5THR3 1501 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 LOC102724159A0A0B4J2E5 919 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 CPP00450 1065 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 ATP2B1P20020 1258 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 CLCN6P51797 869 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
CCR9-201ENST00000355983 API5Q9BZZ5 524 aaKnown RBP9.11□□□□□ -0.95
CCR9-201ENST00000355983 LRRFIP2Q9Y608 721 aaKnown RBP9.11□□□□□ -0.95
CCR9-201ENST00000355983 TET3O43151 1660 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 GLI2P10070 1586 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 PLEKHD1A6NEE1 506 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 MAP3K11Q16584 847 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 ANKRD44Q8N8A2 993 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 ST7Q9NRC1 585 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 DONSONQ9NYP3 566 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 MRVI1Q9Y6F6 885 aa9.11□□□□□ -0.95
CCR9-201ENST00000355983 ATP10DQ9P241 1426 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 F13A1P00488 732 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 MAPK8IP2Q13387 824 aaPredicted RBP9.1□□□□□ -0.95
CCR9-201ENST00000355983 GIMAP6Q6P9H5 292 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 CCDC91Q7Z6B0 441 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 LRRC8AQ8IWT6 810 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 CCDC191Q8NCU4 936 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 CACTINQ8WUQ7 758 aaKnown RBP9.1□□□□□ -0.95
CCR9-201ENST00000355983 CNPY2Q9Y2B0 182 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 RRP15Q9Y3B9 282 aaKnown RBP9.1□□□□□ -0.95
CCR9-201ENST00000355983 QRICH2Q9H0J4 1663 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 DEPDC5O75140 1603 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 U2SURPO15042 1029 aaKnown RBP9.1□□□□□ -0.95
CCR9-201ENST00000355983 U2AF1L5P0DN76 240 aaPredicted RBP9.1□□□□□ -0.95
CCR9-201ENST00000355983 U2AF1Q01081 240 aaKnown RBP eCLIP9.1□□□□□ -0.95
CCR9-201ENST00000355983 TYRO3Q06418 890 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 LRMPQ12912 555 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 TTC31Q49AM3 519 aaPredicted RBP9.1□□□□□ -0.95
CCR9-201ENST00000355983 TMCO3Q6UWJ1 677 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 CEP89Q96ST8 783 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 TTC21BQ7Z4L5 1316 aa9.1□□□□□ -0.95
CCR9-201ENST00000355983 FOXD4L5Q5VV16 416 aaPredicted RBP9.09□□□□□ -0.95
CCR9-201ENST00000355983 CCAR2Q8N163 923 aaKnown RBP9.09□□□□□ -0.95
CCR9-201ENST00000355983 FOXD4L4Q8WXT5 416 aaPredicted RBP9.09□□□□□ -0.95
CCR9-201ENST00000355983 CARD10Q9BWT7 1032 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 GDPD2Q9HCC8 539 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 ADGRB1O14514 1584 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 STX6O43752 255 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 HSP90B1P14625 803 aaKnown RBP9.09□□□□□ -0.95
CCR9-201ENST00000355983 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 RTF1Q92541 710 aaKnown RBP9.09□□□□□ -0.95
CCR9-201ENST00000355983 TACO1Q9BSH4 297 aaKnown RBP9.09□□□□□ -0.95
CCR9-201ENST00000355983 DEF6Q9H4E7 631 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 CBX8Q9HC52 389 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 MED4Q9NPJ6 270 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 CLIP2Q9UDT6 1046 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 ATP10BO94823 1461 aa9.09□□□□□ -0.95
CCR9-201ENST00000355983 CHD2O14647 1828 aaKnown RBP9.09□□□□□ -0.95
CCR9-201ENST00000355983 PSDA5PKW4 1024 aaPredicted RBP9.08□□□□□ -0.96
CCR9-201ENST00000355983 ACTN2P35609 894 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 HNRNPMP52272 730 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCR9-201ENST00000355983 C10orf67Q8IYJ2 551 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 NEK11Q8NG66 645 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 PPM1EQ8WY54 764 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 ESYT1Q9BSJ8 1104 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 DDX19AQ9NUU7 478 aaKnown RBP9.08□□□□□ -0.96
CCR9-201ENST00000355983 SYCP2Q9BX26 1530 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 GSDMDP57764 484 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 CCDC158Q5M9N0 1113 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 DRC7Q8IY82 874 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 GTF3C6Q969F1 213 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 SMARCE1Q969G3 411 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 TRIM5Q9C035 493 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 NUP62CLQ9H1M0 184 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 PLCH2O75038 1416 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 ARHGEF40Q8TER5 1519 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 VAMP4O75379 141 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 SATB1Q01826 763 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 TSGA10IPQ3SY00 556 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 CARMIL2Q6F5E8 1435 aa9.08□□□□□ -0.96
CCR9-201ENST00000355983 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCR9-201ENST00000355983 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
CCR9-201ENST00000355983 ORC3Q9UBD5 711 aaPredicted RBP9.08□□□□□ -0.96
CCR9-201ENST00000355983 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCR9-201ENST00000355983 KIF1BO60333 1816 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 CCP110O43303 1012 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 TRDNQ13061 729 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 REXO1L1PQ8IX06 675 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 BANK1Q8NDB2 785 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 IMPACTQ9P2X3 320 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
CCR9-201ENST00000355983 PHLPP2Q6ZVD8 1323 aa9.07□□□□□ -0.96
CCR9-201ENST00000355983 VWDEQ8N2E2 1590 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms