RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 FLT4P35916 1363 aa13.75□□□□□ -0.21
CAPN9-202ENST00000354537 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
CAPN9-202ENST00000354537 PTPRUQ92729 1446 aa13.74□□□□□ -0.21
CAPN9-202ENST00000354537 SGSM2O43147 1006 aa13.74□□□□□ -0.21
CAPN9-202ENST00000354537 POLA2Q14181 598 aa13.74□□□□□ -0.21
CAPN9-202ENST00000354537 FMN2Q9NZ56 1722 aa13.74□□□□□ -0.21
CAPN9-202ENST00000354537 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
CAPN9-202ENST00000354537 NOLC1Q14978 699 aaKnown RBP eCLIP13.74□□□□□ -0.21
CAPN9-202ENST00000354537 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
CAPN9-202ENST00000354537 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
CAPN9-202ENST00000354537 LIMCH1Q9UPQ0 1083 aa13.74□□□□□ -0.21
CAPN9-202ENST00000354537 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
CAPN9-202ENST00000354537 KDM4AO75164 1064 aa13.73□□□□□ -0.21
CAPN9-202ENST00000354537 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
CAPN9-202ENST00000354537 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
CAPN9-202ENST00000354537 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
CAPN9-202ENST00000354537 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 STX6O43752 255 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 ADCY5O95622 1261 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
CAPN9-202ENST00000354537 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 UNC5CLQ8IV45 518 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 ZSCAN31Q96LW9 406 aaPredicted RBP13.72□□□□□ -0.21
CAPN9-202ENST00000354537 CCDC94Q9BW85 323 aaPredicted RBP13.72□□□□□ -0.21
CAPN9-202ENST00000354537 SNX14Q9Y5W7 946 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 LRRFIP2Q9Y608 721 aaKnown RBP13.72□□□□□ -0.21
CAPN9-202ENST00000354537 ROBO2Q9HCK4 1378 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 F13A1P00488 732 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 CNTROBQ8N137 903 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 PI4K2BQ8TCG2 481 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 FUCA2Q9BTY2 467 aa13.72□□□□□ -0.21
CAPN9-202ENST00000354537 LSG1Q9H089 658 aaKnown RBP13.72□□□□□ -0.21
CAPN9-202ENST00000354537 KCNB2Q92953 911 aa13.71□□□□□ -0.21
CAPN9-202ENST00000354537 KIF1BPQ96EK5 621 aa13.71□□□□□ -0.21
CAPN9-202ENST00000354537 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
CAPN9-202ENST00000354537 USP25Q9UHP3 1055 aa13.71□□□□□ -0.21
CAPN9-202ENST00000354537 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
CAPN9-202ENST00000354537 FOXO3O43524 673 aa13.71□□□□□ -0.21
CAPN9-202ENST00000354537 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.22
CAPN9-202ENST00000354537 GNAT3A8MTJ3 354 aa13.7□□□□□ -0.22
CAPN9-202ENST00000354537 SYT1P21579 422 aa13.7□□□□□ -0.22
CAPN9-202ENST00000354537 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
CAPN9-202ENST00000354537 SH2B1Q9NRF2 756 aaPredicted RBP13.7□□□□□ -0.22
CAPN9-202ENST00000354537 SMC3Q9UQE7 1217 aa13.7□□□□□ -0.22
CAPN9-202ENST00000354537 TTC41PQ6P2S7 1318 aa13.7□□□□□ -0.22
CAPN9-202ENST00000354537 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
CAPN9-202ENST00000354537 CNPY2Q9Y2B0 182 aa13.7□□□□□ -0.22
CAPN9-202ENST00000354537 AK2P54819 239 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
CAPN9-202ENST00000354537 VPS53Q5VIR6 699 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
CAPN9-202ENST00000354537 RUFY2Q8WXA3 655 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 EYA1Q99502 592 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 PRDM4Q9UKN5 801 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 TMEM2Q9UHN6 1383 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
CAPN9-202ENST00000354537 RUFY3Q7L099 469 aa13.69□□□□□ -0.22
CAPN9-202ENST00000354537 IL25Q9H293 177 aa13.68□□□□□ -0.22
CAPN9-202ENST00000354537 CEP170BQ9Y4F5 1589 aaPredicted RBP13.68□□□□□ -0.22
CAPN9-202ENST00000354537 GOLGA6L6A8MZA4 724 aa13.68□□□□□ -0.22
CAPN9-202ENST00000354537 HOXB7P09629 217 aa13.68□□□□□ -0.22
CAPN9-202ENST00000354537 PPP1R42Q7Z4L9 355 aa13.68□□□□□ -0.22
CAPN9-202ENST00000354537 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
CAPN9-202ENST00000354537 SURF6O75683 361 aaKnown RBP13.67□□□□□ -0.22
CAPN9-202ENST00000354537 HCLS1P14317 486 aaPredicted RBP13.67□□□□□ -0.22
CAPN9-202ENST00000354537 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
CAPN9-202ENST00000354537 HYPKQ9NX55 129 aa13.67□□□□□ -0.22
CAPN9-202ENST00000354537 GLRX3O76003 335 aaKnown RBP13.67□□□□□ -0.22
CAPN9-202ENST00000354537 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
CAPN9-202ENST00000354537 CCDC171Q6TFL3 1326 aa13.67□□□□□ -0.22
CAPN9-202ENST00000354537 PLEKHG1Q9ULL1 1385 aa13.67□□□□□ -0.22
CAPN9-202ENST00000354537 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 ELP1O95163 1332 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 AMPHP49418 695 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
CAPN9-202ENST00000354537 RIMS1Q86UR5 1692 aaKnown RBP13.65□□□□□ -0.22
CAPN9-202ENST00000354537 CCDC192P0DO97 292 aa13.65□□□□□ -0.22
CAPN9-202ENST00000354537 MTX1Q13505 466 aa13.65□□□□□ -0.22
CAPN9-202ENST00000354537 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
CAPN9-202ENST00000354537 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
CAPN9-202ENST00000354537 TNRQ92752 1358 aa13.65□□□□□ -0.22
CAPN9-202ENST00000354537 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
CAPN9-202ENST00000354537 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
CAPN9-202ENST00000354537 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
CAPN9-202ENST00000354537 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
CAPN9-202ENST00000354537 ALDH8A1Q9H2A2 487 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-202ENST00000354537 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
CAPN9-202ENST00000354537 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
CAPN9-202ENST00000354537 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
CAPN9-202ENST00000354537 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
CAPN9-202ENST00000354537 GJB2P29033 226 aa13.64□□□□□ -0.23
CAPN9-202ENST00000354537 CHAF1AQ13111 956 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-202ENST00000354537 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-202ENST00000354537 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms