RNA–Protein interactions for RNA: ENST00000350669.5

LDHB-201, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHB, Length 1,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-201ENST00000350669 TIE1P35590 1138 aa11.73□□□□□ -0.53
LDHB-201ENST00000350669 TMF1P82094 1093 aa11.73□□□□□ -0.53
LDHB-201ENST00000350669 RASSF7Q02833 373 aa11.73□□□□□ -0.53
LDHB-201ENST00000350669 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
LDHB-201ENST00000350669 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
LDHB-201ENST00000350669 PIM2Q9P1W9 311 aa11.73□□□□□ -0.53
LDHB-201ENST00000350669 ITGB4P16144 1822 aa11.72□□□□□ -0.53
LDHB-201ENST00000350669 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
LDHB-201ENST00000350669 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
LDHB-201ENST00000350669 PARP3Q9Y6F1 533 aa11.72□□□□□ -0.53
LDHB-201ENST00000350669 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.53
LDHB-201ENST00000350669 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
LDHB-201ENST00000350669 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
LDHB-201ENST00000350669 RRS1Q15050 365 aaKnown RBP11.71□□□□□ -0.53
LDHB-201ENST00000350669 NLGN1Q8N2Q7 840 aa11.71□□□□□ -0.53
LDHB-201ENST00000350669 COG3Q96JB2 828 aa11.71□□□□□ -0.53
LDHB-201ENST00000350669 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.53
LDHB-201ENST00000350669 C4AP0C0L4 1744 aa11.71□□□□□ -0.54
LDHB-201ENST00000350669 ANKRD26Q9UPS8 1709 aa11.71□□□□□ -0.54
LDHB-201ENST00000350669 CHRNA5P30532 468 aa11.7□□□□□ -0.54
LDHB-201ENST00000350669 TRAPPC3LQ5T215 181 aa11.7□□□□□ -0.54
LDHB-201ENST00000350669 TESK2Q96S53 571 aa11.7□□□□□ -0.54
LDHB-201ENST00000350669 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
LDHB-201ENST00000350669 SMG6Q86US8 1419 aaKnown RBP11.7□□□□□ -0.54
LDHB-201ENST00000350669 GYS1P13807 737 aa11.69□□□□□ -0.54
LDHB-201ENST00000350669 ABHD8Q96I13 439 aa11.69□□□□□ -0.54
LDHB-201ENST00000350669 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
LDHB-201ENST00000350669 TERF2IPQ9NYB0 399 aa11.69□□□□□ -0.54
LDHB-201ENST00000350669 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
LDHB-201ENST00000350669 BRCA1P38398 1863 aaKnown RBP11.69□□□□□ -0.54
LDHB-201ENST00000350669 VIRMAQ69YN4 1812 aaKnown RBP11.68□□□□□ -0.54
LDHB-201ENST00000350669 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
LDHB-201ENST00000350669 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
LDHB-201ENST00000350669 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
LDHB-201ENST00000350669 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
LDHB-201ENST00000350669 TMOD3Q9NYL9 352 aa11.68□□□□□ -0.54
LDHB-201ENST00000350669 CTCFP49711 727 aaPredicted RBP11.67□□□□□ -0.54
LDHB-201ENST00000350669 LBX1P52954 281 aa11.67□□□□□ -0.54
LDHB-201ENST00000350669 AIDAQ96BJ3 306 aa11.67□□□□□ -0.54
LDHB-201ENST00000350669 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
LDHB-201ENST00000350669 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
LDHB-201ENST00000350669 RGL2O15211 777 aa11.66□□□□□ -0.54
LDHB-201ENST00000350669 RFC4P35249 363 aa11.66□□□□□ -0.54
LDHB-201ENST00000350669 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
LDHB-201ENST00000350669 HSP90AB2PQ58FF8 381 aa11.66□□□□□ -0.54
LDHB-201ENST00000350669 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
LDHB-201ENST00000350669 CNTNAP1P78357 1384 aa11.65□□□□□ -0.54
LDHB-201ENST00000350669 POTECB2RU33 542 aa11.65□□□□□ -0.54
LDHB-201ENST00000350669 MLLT1Q03111 559 aaPredicted RBP11.65□□□□□ -0.54
LDHB-201ENST00000350669 DDR1Q08345 913 aa11.65□□□□□ -0.54
LDHB-201ENST00000350669 TMEM106CQ9BVX2 250 aa11.65□□□□□ -0.54
LDHB-201ENST00000350669 ATG3Q9NT62 314 aa11.65□□□□□ -0.54
LDHB-201ENST00000350669 KDM6AO15550 1401 aaPredicted RBP11.65□□□□□ -0.54
LDHB-201ENST00000350669 KDRP35968 1356 aa11.64□□□□□ -0.55
LDHB-201ENST00000350669 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
LDHB-201ENST00000350669 LMNB1P20700 586 aa11.64□□□□□ -0.55
LDHB-201ENST00000350669 PSEN1P49768 467 aa11.64□□□□□ -0.55
LDHB-201ENST00000350669 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
LDHB-201ENST00000350669 SLC4A9Q96Q91 983 aa11.64□□□□□ -0.55
LDHB-201ENST00000350669 SRP68Q9UHB9 627 aaKnown RBP11.64□□□□□ -0.55
LDHB-201ENST00000350669 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
LDHB-201ENST00000350669 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
LDHB-201ENST00000350669 GGNBP2Q9H3C7 697 aa11.63□□□□□ -0.55
LDHB-201ENST00000350669 VEGFBP49765 207 aa11.62□□□□□ -0.55
LDHB-201ENST00000350669 INSRP06213 1382 aa11.62□□□□□ -0.55
LDHB-201ENST00000350669 RPS6KA4O75676 772 aa11.61□□□□□ -0.55
LDHB-201ENST00000350669 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
LDHB-201ENST00000350669 SPG7Q9UQ90 795 aa11.61□□□□□ -0.55
LDHB-201ENST00000350669 CNTNAP4Q9C0A0 1308 aa11.61□□□□□ -0.55
LDHB-201ENST00000350669 SBF1O95248 1867 aa11.61□□□□□ -0.55
LDHB-201ENST00000350669 TIAM2Q8IVF5 1701 aa11.61□□□□□ -0.55
LDHB-201ENST00000350669 HSPA8P11142 646 aaKnown RBP11.6□□□□□ -0.55
LDHB-201ENST00000350669 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
LDHB-201ENST00000350669 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
LDHB-201ENST00000350669 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
LDHB-201ENST00000350669 FLT4P35916 1363 aa11.6□□□□□ -0.55
LDHB-201ENST00000350669 NFKBIEO00221 500 aa11.6□□□□□ -0.55
LDHB-201ENST00000350669 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
LDHB-201ENST00000350669 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
LDHB-201ENST00000350669 POLRMTO00411 1230 aaKnown RBP11.59□□□□□ -0.55
LDHB-201ENST00000350669 FYB1O15117 783 aa11.59□□□□□ -0.55
LDHB-201ENST00000350669 PHKG2P15735 406 aa11.59□□□□□ -0.55
LDHB-201ENST00000350669 DPY19L2Q6NUT2 758 aa11.59□□□□□ -0.55
LDHB-201ENST00000350669 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
LDHB-201ENST00000350669 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
LDHB-201ENST00000350669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
LDHB-201ENST00000350669 CRKLP46109 303 aaKnown RBP11.57□□□□□ -0.56
LDHB-201ENST00000350669 IFNL2Q8IZJ0 200 aa11.57□□□□□ -0.56
LDHB-201ENST00000350669 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
LDHB-201ENST00000350669 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
LDHB-201ENST00000350669 POLR3GLQ9BT43 218 aa11.57□□□□□ -0.56
LDHB-201ENST00000350669 CARD14Q9BXL6 1004 aa11.57□□□□□ -0.56
LDHB-201ENST00000350669 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
LDHB-201ENST00000350669 PASKQ96RG2 1323 aa11.57□□□□□ -0.56
LDHB-201ENST00000350669 TMEM88BA6NKF7 163 aa11.56□□□□□ -0.56
LDHB-201ENST00000350669 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
LDHB-201ENST00000350669 PTCD1O75127 700 aaKnown RBP11.56□□□□□ -0.56
LDHB-201ENST00000350669 DDNO94850 711 aaPredicted RBP11.56□□□□□ -0.56
LDHB-201ENST00000350669 RGS19P49795 217 aa11.56□□□□□ -0.56
LDHB-201ENST00000350669 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms