RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 TAGLNQ01995 201 aaKnown RBP6.73□□□□□ -1.33
VCAM1-202ENST00000347652 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
VCAM1-202ENST00000347652 IP6K1Q92551 441 aa6.73□□□□□ -1.33
VCAM1-202ENST00000347652 CDCA7Q9BWT1 371 aaPredicted RBP6.73□□□□□ -1.33
VCAM1-202ENST00000347652 MFRPQ9BY79 579 aa6.73□□□□□ -1.33
VCAM1-202ENST00000347652 FLT4P35916 1363 aa6.73□□□□□ -1.33
VCAM1-202ENST00000347652 HOXC9P31274 260 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 GSE1Q14687 1217 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 HSP90AB2PQ58FF8 381 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 MRS2Q9HD23 443 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 GOPCQ9HD26 462 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 ABCC6O95255 1503 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 SOCS7O14512 581 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 CSB-PGBD3P0DP91 1061 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 AMPHP49418 695 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 TOM1L2Q6ZVM7 507 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 OXER1Q8TDS5 423 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 ANKRD24Q8TF21 1146 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 CFAP53Q96M91 514 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 ERBB3P21860 1342 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 WDR17Q8IZU2 1322 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 AAMPQ13685 434 aa6.72□□□□□ -1.33
VCAM1-202ENST00000347652 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-202ENST00000347652 APBB1IPQ7Z5R6 666 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-202ENST00000347652 PNISRQ8TF01 805 aaKnown RBP6.72□□□□□ -1.33
VCAM1-202ENST00000347652 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.72□□□□□ -1.33
VCAM1-202ENST00000347652 LAS1LQ9Y4W2 734 aaKnown RBP6.72□□□□□ -1.33
VCAM1-202ENST00000347652 THSD7AQ9UPZ6 1657 aa6.71□□□□□ -1.33
VCAM1-202ENST00000347652 CRB1P82279 1406 aa6.71□□□□□ -1.34
VCAM1-202ENST00000347652 IL13P35225 146 aa6.71□□□□□ -1.34
VCAM1-202ENST00000347652 USHBP1Q8N6Y0 703 aa6.71□□□□□ -1.34
VCAM1-202ENST00000347652 BLMP54132 1417 aaPredicted RBP6.71□□□□□ -1.34
VCAM1-202ENST00000347652 DIAPH1O60610 1272 aaKnown RBP6.71□□□□□ -1.34
VCAM1-202ENST00000347652 EIF4A2Q14240 407 aaKnown RBP6.71□□□□□ -1.34
VCAM1-202ENST00000347652 TCP11L2Q8N4U5 519 aa6.71□□□□□ -1.34
VCAM1-202ENST00000347652 MYH16Q9H6N6 1097 aa6.71□□□□□ -1.34
VCAM1-202ENST00000347652 PYGBP11216 843 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 AMHR2Q16671 573 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 ADAMTS19Q8TE59 1207 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 GIPC2Q8TF65 315 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 NLRP2Q9NX02 1062 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 TBC1D12O60347 775 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 CANXP27824 592 aaKnown RBP6.7□□□□□ -1.34
VCAM1-202ENST00000347652 NAALADL2Q58DX5 795 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 NBPF6Q5VWK0 638 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 GIGYF2Q6Y7W6 1299 aaKnown RBP6.7□□□□□ -1.34
VCAM1-202ENST00000347652 DPH6Q7L8W6 267 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 PBXIP1Q96AQ6 731 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 NBPF4Q96M43 638 aa6.7□□□□□ -1.34
VCAM1-202ENST00000347652 DNAJC2Q99543 621 aaKnown RBP6.7□□□□□ -1.34
VCAM1-202ENST00000347652 WNK3Q9BYP7 1800 aa6.69□□□□□ -1.34
VCAM1-202ENST00000347652 TMTC2Q8N394 836 aa6.69□□□□□ -1.34
VCAM1-202ENST00000347652 LARP6Q9BRS8 491 aaKnown RBP6.69□□□□□ -1.34
VCAM1-202ENST00000347652 LRRC37A3O60309 1634 aa6.69□□□□□ -1.34
VCAM1-202ENST00000347652 KRT27Q7Z3Y8 459 aa6.69□□□□□ -1.34
VCAM1-202ENST00000347652 UPF1Q92900 1129 aaKnown RBP eCLIP6.69□□□□□ -1.34
VCAM1-202ENST00000347652 CARD10Q9BWT7 1032 aa6.69□□□□□ -1.34
VCAM1-202ENST00000347652 NUDCQ9Y266 331 aa6.69□□□□□ -1.34
VCAM1-202ENST00000347652 FAM208AQ9UK61 1670 aaKnown RBP6.69□□□□□ -1.34
VCAM1-202ENST00000347652 RGPD1P0DJD0 1748 aa6.69□□□□□ -1.34
VCAM1-202ENST00000347652 RBM46Q8TBY0 533 aaKnown RBP6.68□□□□□ -1.34
VCAM1-202ENST00000347652 ADAMTS8Q9UP79 889 aa6.68□□□□□ -1.34
VCAM1-202ENST00000347652 WDR43Q15061 677 aaKnown RBP eCLIP6.68□□□□□ -1.34
VCAM1-202ENST00000347652 POLR3EQ9NVU0 708 aa6.68□□□□□ -1.34
VCAM1-202ENST00000347652 DISP2A7MBM2 1401 aa6.68□□□□□ -1.34
VCAM1-202ENST00000347652 PARNO95453 639 aaKnown RBP6.68□□□□□ -1.34
VCAM1-202ENST00000347652 PTF1AQ7RTS3 328 aa6.68□□□□□ -1.34
VCAM1-202ENST00000347652 UBXN4Q92575 508 aa6.68□□□□□ -1.34
VCAM1-202ENST00000347652 EYA1Q99502 592 aa6.68□□□□□ -1.34
VCAM1-202ENST00000347652 PARP4Q9UKK3 1724 aaKnown RBP6.68□□□□□ -1.34
VCAM1-202ENST00000347652 MEGF6O75095 1541 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 IGSF1Q8N6C5 1336 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 TMEM88BA6NKF7 163 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 U2SURPO15042 1029 aaKnown RBP6.67□□□□□ -1.34
VCAM1-202ENST00000347652 HSP90AB4PQ58FF6 505 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 THRAP3Q9Y2W1 955 aaKnown RBP6.67□□□□□ -1.34
VCAM1-202ENST00000347652 NCAPD2Q15021 1401 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 PATL2C9JE40 543 aaKnown RBP6.67□□□□□ -1.34
VCAM1-202ENST00000347652 IRF6O14896 467 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 MAFGO15525 162 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 U2AF1L5P0DN76 240 aaPredicted RBP6.67□□□□□ -1.34
VCAM1-202ENST00000347652 U2AF1Q01081 240 aaKnown RBP eCLIP6.67□□□□□ -1.34
VCAM1-202ENST00000347652 BCL2L13Q9BXK5 485 aa6.67□□□□□ -1.34
VCAM1-202ENST00000347652 DDB1Q16531 1140 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 GORABQ5T7V8 394 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 SPTY2D1Q68D10 685 aaPredicted RBP6.66□□□□□ -1.34
VCAM1-202ENST00000347652 MARCH10Q8NA82 808 aaPredicted RBP6.66□□□□□ -1.34
VCAM1-202ENST00000347652 SGIP1Q9BQI5 828 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 ZBTB47Q9UFB7 747 aaPredicted RBP6.66□□□□□ -1.34
VCAM1-202ENST00000347652 USTQ9Y2C2 406 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 KDRP35968 1356 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 FCHSD2O94868 740 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 GPATCH11Q8N954 259 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 PLEKHF1Q96S99 279 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 SHANK3Q9BYB0 1731 aa6.66□□□□□ -1.34
VCAM1-202ENST00000347652 HMOX1P09601 288 aa6.65□□□□□ -1.34
VCAM1-202ENST00000347652 IL2RBP14784 551 aa6.65□□□□□ -1.34
VCAM1-202ENST00000347652 PDE3BQ13370 1112 aa6.65□□□□□ -1.34
VCAM1-202ENST00000347652 TSR1Q2NL82 804 aaKnown RBP6.65□□□□□ -1.34
VCAM1-202ENST00000347652 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms