RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 USP26Q9BXU7 913 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 CROCC2H7BZ55 1655 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 SMC2O95347 1197 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 CEP85Q6P2H3 762 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 ESYT1Q9BSJ8 1104 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 TEX13AQ9BXU3 409 aaPredicted RBP17.44■□□□□ 0.38
NUP50-201ENST00000347635 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
NUP50-201ENST00000347635 PLXNC1O60486 1568 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
NUP50-201ENST00000347635 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
NUP50-201ENST00000347635 GPS2Q13227 327 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 CAMK4Q16566 473 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 HS1BP3Q53T59 392 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 NGLY1Q96IV0 654 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 STX6O43752 255 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 ANAPC15P60006 121 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 CFAP45Q9UL16 551 aa17.43■□□□□ 0.38
NUP50-201ENST00000347635 KRT32Q14532 448 aa17.42■□□□□ 0.38
NUP50-201ENST00000347635 PLA2R1Q13018 1463 aa17.42■□□□□ 0.38
NUP50-201ENST00000347635 ADCY5O95622 1261 aa17.42■□□□□ 0.38
NUP50-201ENST00000347635 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
NUP50-201ENST00000347635 DYNC1I1O14576 645 aa17.42■□□□□ 0.38
NUP50-201ENST00000347635 FERMT3Q86UX7 667 aa17.42■□□□□ 0.38
NUP50-201ENST00000347635 FLT4P35916 1363 aa17.41■□□□□ 0.38
NUP50-201ENST00000347635 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
NUP50-201ENST00000347635 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
NUP50-201ENST00000347635 UBE2HP62256 183 aa17.41■□□□□ 0.38
NUP50-201ENST00000347635 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
NUP50-201ENST00000347635 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
NUP50-201ENST00000347635 ADAMTS2O95450 1211 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 STK38Q15208 465 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 PDCL2Q8N4E4 241 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 ME1P48163 572 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 TRIM34Q9BYJ4 488 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 ZNF652Q9Y2D9 606 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 SCAND2PQ9GZW5 306 aaPredicted RBP17.4■□□□□ 0.38
NUP50-201ENST00000347635 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
NUP50-201ENST00000347635 GJB2P29033 226 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
NUP50-201ENST00000347635 CCP110O43303 1012 aa17.39■□□□□ 0.38
NUP50-201ENST00000347635 MYL6BP14649 208 aa17.39■□□□□ 0.38
NUP50-201ENST00000347635 LARP6Q9BRS8 491 aaKnown RBP17.39■□□□□ 0.38
NUP50-201ENST00000347635 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.38
NUP50-201ENST00000347635 CDC42BPAQ5VT25 1732 aa17.39■□□□□ 0.37
NUP50-201ENST00000347635 OFD1O75665 1012 aa17.39■□□□□ 0.37
NUP50-201ENST00000347635 HYPKQ9NX55 129 aa17.39■□□□□ 0.37
NUP50-201ENST00000347635 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
NUP50-201ENST00000347635 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.37
NUP50-201ENST00000347635 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
NUP50-201ENST00000347635 HSPA2P54652 639 aa17.38■□□□□ 0.37
NUP50-201ENST00000347635 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
NUP50-201ENST00000347635 ZSCAN22P10073 491 aaPredicted RBP17.38■□□□□ 0.37
NUP50-201ENST00000347635 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
NUP50-201ENST00000347635 PIK3R4Q99570 1358 aa17.38■□□□□ 0.37
NUP50-201ENST00000347635 PES1O00541 588 aaKnown RBP17.38■□□□□ 0.37
NUP50-201ENST00000347635 DHX8Q14562 1220 aaKnown RBP17.38■□□□□ 0.37
NUP50-201ENST00000347635 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
NUP50-201ENST00000347635 TSR1Q2NL82 804 aaKnown RBP17.38■□□□□ 0.37
NUP50-201ENST00000347635 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
NUP50-201ENST00000347635 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
NUP50-201ENST00000347635 NLRP1Q9C000 1473 aa17.38■□□□□ 0.37
NUP50-201ENST00000347635 CCDC158Q5M9N0 1113 aa17.37■□□□□ 0.37
NUP50-201ENST00000347635 DBF4Q9UBU7 674 aaPredicted RBP17.37■□□□□ 0.37
NUP50-201ENST00000347635 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
NUP50-201ENST00000347635 CNNM1Q9NRU3 951 aa17.37■□□□□ 0.37
NUP50-201ENST00000347635 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
NUP50-201ENST00000347635 PPP1R42Q7Z4L9 355 aa17.37■□□□□ 0.37
NUP50-201ENST00000347635 ANTXR1Q9H6X2 564 aa17.37■□□□□ 0.37
NUP50-201ENST00000347635 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
NUP50-201ENST00000347635 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
NUP50-201ENST00000347635 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
NUP50-201ENST00000347635 MYOM2P54296 1465 aa17.36■□□□□ 0.37
NUP50-201ENST00000347635 PRIMPOLQ96LW4 560 aa17.36■□□□□ 0.37
NUP50-201ENST00000347635 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
NUP50-201ENST00000347635 A0A0U1RQG5 324 aaPredicted RBP17.36■□□□□ 0.37
NUP50-201ENST00000347635 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
NUP50-201ENST00000347635 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
NUP50-201ENST00000347635 PDILTQ8N807 584 aa17.35■□□□□ 0.37
NUP50-201ENST00000347635 CNPY2Q9Y2B0 182 aa17.35■□□□□ 0.37
NUP50-201ENST00000347635 PLEKHG1Q9ULL1 1385 aa17.35■□□□□ 0.37
NUP50-201ENST00000347635 MPRIPQ6WCQ1 1025 aa17.35■□□□□ 0.37
NUP50-201ENST00000347635 EVI5LQ96CN4 794 aa17.35■□□□□ 0.37
NUP50-201ENST00000347635 TULP1O00294 542 aaPredicted RBP17.35■□□□□ 0.37
NUP50-201ENST00000347635 ERICH2A1L162 156 aa17.35■□□□□ 0.37
NUP50-201ENST00000347635 ANKRD20A12PQ8NF67 263 aa17.35■□□□□ 0.37
NUP50-201ENST00000347635 HSP90AB2PQ58FF8 381 aa17.34■□□□□ 0.37
NUP50-201ENST00000347635 DDX11Q96FC9 970 aa17.34■□□□□ 0.37
NUP50-201ENST00000347635 ECHDC1Q9NTX5 307 aa17.34■□□□□ 0.37
NUP50-201ENST00000347635 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
NUP50-201ENST00000347635 RHPN1Q8TCX5 695 aa17.34■□□□□ 0.37
NUP50-201ENST00000347635 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
NUP50-201ENST00000347635 RBSNQ9H1K0 784 aa17.34■□□□□ 0.37
NUP50-201ENST00000347635 ZNF445P59923 1031 aa17.34■□□□□ 0.37
NUP50-201ENST00000347635 SHROOM2Q13796 1616 aa17.33■□□□□ 0.37
NUP50-201ENST00000347635 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.37
NUP50-201ENST00000347635 CCDC66A2RUB6 948 aa17.33■□□□□ 0.37
NUP50-201ENST00000347635 BOLA2Q9H3K6 86 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms