RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CANXP27824 592 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-201ENST00000346501 PARP3Q9Y6F1 533 aa20.72■□□□□ 0.91
TSPAN4-201ENST00000346501 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-201ENST00000346501 TMPOP42166 694 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-201ENST00000346501 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
TSPAN4-201ENST00000346501 ADAMTS8Q9UP79 889 aa20.71■□□□□ 0.91
TSPAN4-201ENST00000346501 ZBTB1Q9Y2K1 713 aa20.71■□□□□ 0.91
TSPAN4-201ENST00000346501 UBR2Q8IWV8 1755 aa20.71■□□□□ 0.91
TSPAN4-201ENST00000346501 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
TSPAN4-201ENST00000346501 MYH14Q7Z406 1995 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-201ENST00000346501 GYS1P13807 737 aa20.7■□□□□ 0.9
TSPAN4-201ENST00000346501 GPR162Q16538 588 aa20.7■□□□□ 0.9
TSPAN4-201ENST00000346501 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-201ENST00000346501 USP42Q9H9J4 1324 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-201ENST00000346501 COL15A1P39059 1388 aa20.7■□□□□ 0.9
TSPAN4-201ENST00000346501 NEUROD2Q15784 382 aa20.69■□□□□ 0.9
TSPAN4-201ENST00000346501 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-201ENST00000346501 KCNQ3O43525 872 aa20.68■□□□□ 0.9
TSPAN4-201ENST00000346501 DLG5Q8TDM6 1919 aa20.67■□□□□ 0.9
TSPAN4-201ENST00000346501 SRP68Q9UHB9 627 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-201ENST00000346501 NARFQ9UHQ1 456 aa20.67■□□□□ 0.9
TSPAN4-201ENST00000346501 IL6STP40189 918 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-201ENST00000346501 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
TSPAN4-201ENST00000346501 THUMPD2Q9BTF0 503 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-201ENST00000346501 MIS18AQ9NYP9 233 aa20.66■□□□□ 0.9
TSPAN4-201ENST00000346501 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
TSPAN4-201ENST00000346501 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-201ENST00000346501 EIF5P55010 431 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-201ENST00000346501 BABAM1Q9NWV8 329 aa20.65■□□□□ 0.9
TSPAN4-201ENST00000346501 A1BGP04217 495 aa20.64■□□□□ 0.89
TSPAN4-201ENST00000346501 NLGN2Q8NFZ4 835 aa20.64■□□□□ 0.89
TSPAN4-201ENST00000346501 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
TSPAN4-201ENST00000346501 FKBP8Q14318 412 aa20.63■□□□□ 0.89
TSPAN4-201ENST00000346501 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
TSPAN4-201ENST00000346501 C4AP0C0L4 1744 aa20.63■□□□□ 0.89
TSPAN4-201ENST00000346501 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
TSPAN4-201ENST00000346501 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-201ENST00000346501 EIF4A1P60842 406 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-201ENST00000346501 TGFB2P61812 414 aa20.6■□□□□ 0.89
TSPAN4-201ENST00000346501 LAS1LQ9Y4W2 734 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-201ENST00000346501 GIGYF1O75420 1035 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-201ENST00000346501 YY1P25490 414 aa20.59■□□□□ 0.89
TSPAN4-201ENST00000346501 DZIP3Q86Y13 1208 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-201ENST00000346501 TBC1D2BQ9UPU7 963 aa20.59■□□□□ 0.89
TSPAN4-201ENST00000346501 ZNF652Q9Y2D9 606 aa20.59■□□□□ 0.89
TSPAN4-201ENST00000346501 APAF1O14727 1248 aa20.58■□□□□ 0.89
TSPAN4-201ENST00000346501 NPHP1O15259 732 aa20.58■□□□□ 0.89
TSPAN4-201ENST00000346501 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
TSPAN4-201ENST00000346501 TM4SF1P30408 202 aa20.57■□□□□ 0.88
TSPAN4-201ENST00000346501 POLRMTO00411 1230 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-201ENST00000346501 NFIXQ14938 502 aa20.56■□□□□ 0.88
TSPAN4-201ENST00000346501 BICDL1Q6ZP65 573 aa20.56■□□□□ 0.88
TSPAN4-201ENST00000346501 KDM3BQ7LBC6 1761 aa20.55■□□□□ 0.88
TSPAN4-201ENST00000346501 DDR1Q08345 913 aa20.55■□□□□ 0.88
TSPAN4-201ENST00000346501 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
TSPAN4-201ENST00000346501 TRIM35Q9UPQ4 493 aa20.55■□□□□ 0.88
TSPAN4-201ENST00000346501 C10orf71Q711Q0 1435 aa20.54■□□□□ 0.88
TSPAN4-201ENST00000346501 SERPINB2P05120 415 aa20.54■□□□□ 0.88
TSPAN4-201ENST00000346501 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-201ENST00000346501 CLEC4GQ6UXB4 293 aa20.54■□□□□ 0.88
TSPAN4-201ENST00000346501 ERBB4Q15303 1308 aa20.53■□□□□ 0.88
TSPAN4-201ENST00000346501 CHL1O00533 1208 aa20.53■□□□□ 0.88
TSPAN4-201ENST00000346501 BCL2L12Q9HB09 334 aa20.53■□□□□ 0.88
TSPAN4-201ENST00000346501 RGL2O15211 777 aa20.52■□□□□ 0.88
TSPAN4-201ENST00000346501 CAMTA2O94983 1202 aa20.52■□□□□ 0.88
TSPAN4-201ENST00000346501 EIF2S2P20042 333 aaKnown RBP20.52■□□□□ 0.88
TSPAN4-201ENST00000346501 CCDC184Q52MB2 194 aa20.52■□□□□ 0.88
TSPAN4-201ENST00000346501 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
TSPAN4-201ENST00000346501 NGEFQ8N5V2 710 aa20.52■□□□□ 0.88
TSPAN4-201ENST00000346501 CFAP44Q96MT7 982 aa20.52■□□□□ 0.88
TSPAN4-201ENST00000346501 CARMIL3Q8ND23 1372 aa20.51■□□□□ 0.87
TSPAN4-201ENST00000346501 A0A0G2JLW4 131 aa20.51■□□□□ 0.87
TSPAN4-201ENST00000346501 GNAI1P63096 354 aa20.51■□□□□ 0.87
TSPAN4-201ENST00000346501 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
TSPAN4-201ENST00000346501 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
TSPAN4-201ENST00000346501 NBPF26B4DH59 902 aa20.5■□□□□ 0.87
TSPAN4-201ENST00000346501 MYL6BP14649 208 aa20.5■□□□□ 0.87
TSPAN4-201ENST00000346501 NBPF10Q6P3W6 841 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-201ENST00000346501 NBPF15Q8N660 670 aa20.5■□□□□ 0.87
TSPAN4-201ENST00000346501 CHMP4AQ9BY43 222 aa20.5■□□□□ 0.87
TSPAN4-201ENST00000346501 PIM2Q9P1W9 311 aa20.5■□□□□ 0.87
TSPAN4-201ENST00000346501 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
TSPAN4-201ENST00000346501 DPEP1P16444 411 aa20.49■□□□□ 0.87
TSPAN4-201ENST00000346501 YBX3P16989 372 aaKnown RBP eCLIP20.49■□□□□ 0.87
TSPAN4-201ENST00000346501 IFT57Q9NWB7 429 aa20.49■□□□□ 0.87
TSPAN4-201ENST00000346501 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
TSPAN4-201ENST00000346501 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
TSPAN4-201ENST00000346501 PXDNLA1KZ92 1463 aa20.49■□□□□ 0.87
TSPAN4-201ENST00000346501 ST5P78524 1137 aa20.48■□□□□ 0.87
TSPAN4-201ENST00000346501 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
TSPAN4-201ENST00000346501 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
TSPAN4-201ENST00000346501 SCN7AQ01118 1682 aa20.48■□□□□ 0.87
TSPAN4-201ENST00000346501 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
TSPAN4-201ENST00000346501 HOXB7P09629 217 aa20.47■□□□□ 0.87
TSPAN4-201ENST00000346501 H0YIN7 160 aa20.46■□□□□ 0.87
TSPAN4-201ENST00000346501 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-201ENST00000346501 PDE6BP35913 854 aa20.46■□□□□ 0.87
TSPAN4-201ENST00000346501 NBPF5PQ86XG9 351 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-201ENST00000346501 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
TSPAN4-201ENST00000346501 CHD4Q14839 1912 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms