RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 ABCC4O15439 1325 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 DDX11L8A8MPP1 907 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 KCNQ4P56696 695 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 RABEP1Q15276 862 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 CCDC83Q8IWF9 413 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 MTMR7Q9Y216 660 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
CASC4-202ENST00000345795 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
CASC4-202ENST00000345795 BICC1Q9H694 974 aaKnown RBP16.09■□□□□ 0.17
CASC4-202ENST00000345795 PALD1Q9ULE6 856 aa16.09■□□□□ 0.17
CASC4-202ENST00000345795 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
CASC4-202ENST00000345795 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
CASC4-202ENST00000345795 EIF4A1P60842 406 aaKnown RBP16.09■□□□□ 0.17
CASC4-202ENST00000345795 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.17
CASC4-202ENST00000345795 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.17
CASC4-202ENST00000345795 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.17
CASC4-202ENST00000345795 KIF1BPQ96EK5 621 aa16.08■□□□□ 0.17
CASC4-202ENST00000345795 TULP1O00294 542 aaPredicted RBP16.08■□□□□ 0.16
CASC4-202ENST00000345795 SMC3Q9UQE7 1217 aa16.08■□□□□ 0.16
CASC4-202ENST00000345795 RTL1A6NKG5 1358 aa16.08■□□□□ 0.16
CASC4-202ENST00000345795 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
CASC4-202ENST00000345795 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.16
CASC4-202ENST00000345795 ATP8B2P98198 1209 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 CHST3Q7LGC8 479 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 PTPRUQ92729 1446 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 AMOTQ4VCS5 1084 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 LMBR1LQ6UX01 489 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
CASC4-202ENST00000345795 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
CASC4-202ENST00000345795 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 CFAP74Q9C0B2 1584 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 NLRP1Q9C000 1473 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 PLEKHG1Q9ULL1 1385 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 SLC4A8Q2Y0W8 1093 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 ZNF790Q6PG37 636 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 HAND2P61296 217 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 TIMM10P62072 90 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
CASC4-202ENST00000345795 PIK3R4Q99570 1358 aa16.05■□□□□ 0.16
CASC4-202ENST00000345795 GUCY1B3Q02153 619 aa16.05■□□□□ 0.16
CASC4-202ENST00000345795 FAM182BQ5T319 152 aa16.05■□□□□ 0.16
CASC4-202ENST00000345795 CCDC129Q6ZRS4 1044 aa16.05■□□□□ 0.16
CASC4-202ENST00000345795 LMTK2Q8IWU2 1503 aa16.05■□□□□ 0.16
CASC4-202ENST00000345795 SUCLG2Q96I99 432 aa16.05■□□□□ 0.16
CASC4-202ENST00000345795 VWDEQ8N2E2 1590 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 GRM8O00222 908 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 CHGBP05060 677 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 CADPS2Q86UW7 1296 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
CASC4-202ENST00000345795 IGSF1Q8N6C5 1336 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 ISY1Q9ULR0 285 aaKnown RBP16.04■□□□□ 0.16
CASC4-202ENST00000345795 GOLIM4O00461 696 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 FAM227BQ96M60 508 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
CASC4-202ENST00000345795 USP26Q9BXU7 913 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
CASC4-202ENST00000345795 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 NRXN1Q9ULB1 1477 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 MYO3AQ8NEV4 1616 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 SYCE3A1L190 88 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 FAM173BQ6P4H8 233 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 TMX3Q96JJ7 454 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 ESYT1Q9BSJ8 1104 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 ADAMTS13Q76LX8 1427 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
CASC4-202ENST00000345795 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.16
CASC4-202ENST00000345795 H3BQV1 296 aa16.02■□□□□ 0.16
CASC4-202ENST00000345795 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.16
CASC4-202ENST00000345795 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
CASC4-202ENST00000345795 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
CASC4-202ENST00000345795 CNNM1Q9NRU3 951 aa16.02■□□□□ 0.16
CASC4-202ENST00000345795 LARP1Q6PKG0 1096 aaKnown RBP16.02■□□□□ 0.15
CASC4-202ENST00000345795 KSR2Q6VAB6 950 aa16.02■□□□□ 0.15
CASC4-202ENST00000345795 MYO5BQ9ULV0 1848 aa16.02■□□□□ 0.15
CASC4-202ENST00000345795 GIGYF1O75420 1035 aaPredicted RBP16.02■□□□□ 0.15
CASC4-202ENST00000345795 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.15
CASC4-202ENST00000345795 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.15
CASC4-202ENST00000345795 CCDC82Q8N4S0 544 aa16.02■□□□□ 0.15
CASC4-202ENST00000345795 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
CASC4-202ENST00000345795 ATP2B1P20020 1258 aa16.01■□□□□ 0.15
CASC4-202ENST00000345795 FAM184AQ8NB25 1140 aa16.01■□□□□ 0.15
CASC4-202ENST00000345795 ATP7BP35670 1465 aa16.01■□□□□ 0.15
CASC4-202ENST00000345795 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
CASC4-202ENST00000345795 CHMLP26374 656 aa16.01■□□□□ 0.15
CASC4-202ENST00000345795 ZCRB1Q8TBF4 217 aaKnown RBP16.01■□□□□ 0.15
CASC4-202ENST00000345795 SMIM5Q71RC9 77 aa16■□□□□ 0.15
CASC4-202ENST00000345795 TFIP11Q9UBB9 837 aaKnown RBP16■□□□□ 0.15
CASC4-202ENST00000345795 CPSF1Q10570 1443 aaKnown RBP16■□□□□ 0.15
CASC4-202ENST00000345795 RAB11FIP3O75154 756 aa16■□□□□ 0.15
CASC4-202ENST00000345795 IDH1O75874 414 aaKnown RBP16■□□□□ 0.15
CASC4-202ENST00000345795 GNL2Q13823 731 aaKnown RBP16■□□□□ 0.15
CASC4-202ENST00000345795 CCDC57Q2TAC2 916 aa16■□□□□ 0.15
CASC4-202ENST00000345795 DRC7Q8IY82 874 aa16■□□□□ 0.15
CASC4-202ENST00000345795 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms