RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 F6X3S4 739 aa9.47□□□□□ -0.89
GDNF-202ENST00000344622 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
GDNF-202ENST00000344622 BRCA2P51587 3418 aa9.47□□□□□ -0.89
GDNF-202ENST00000344622 COL4A1P02462 1669 aa9.47□□□□□ -0.89
GDNF-202ENST00000344622 RREB1Q92766 1687 aa9.47□□□□□ -0.89
GDNF-202ENST00000344622 EIF2S2P20042 333 aaKnown RBP9.47□□□□□ -0.89
GDNF-202ENST00000344622 CABP4P57796 275 aa9.47□□□□□ -0.89
GDNF-202ENST00000344622 A1BGP04217 495 aa9.46□□□□□ -0.89
GDNF-202ENST00000344622 NEFLP07196 543 aa9.46□□□□□ -0.89
GDNF-202ENST00000344622 TEFQ10587 303 aa9.46□□□□□ -0.89
GDNF-202ENST00000344622 FRAT1Q92837 279 aaPredicted RBP9.46□□□□□ -0.89
GDNF-202ENST00000344622 C4AP0C0L4 1744 aa9.46□□□□□ -0.9
GDNF-202ENST00000344622 C4BP0C0L5 1744 aa9.46□□□□□ -0.9
GDNF-202ENST00000344622 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
GDNF-202ENST00000344622 A0A0G2JS52 829 aa9.46□□□□□ -0.9
GDNF-202ENST00000344622 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.9
GDNF-202ENST00000344622 MYH16Q9H6N6 1097 aa9.46□□□□□ -0.9
GDNF-202ENST00000344622 CRBNQ96SW2 442 aa9.45□□□□□ -0.9
GDNF-202ENST00000344622 CICQ96RK0 1608 aaPredicted RBP9.45□□□□□ -0.9
GDNF-202ENST00000344622 NUP98P52948 1817 aa9.45□□□□□ -0.9
GDNF-202ENST00000344622 ADCY9O60503 1353 aa9.45□□□□□ -0.9
GDNF-202ENST00000344622 SLC4A2P04920 1241 aa9.45□□□□□ -0.9
GDNF-202ENST00000344622 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
GDNF-202ENST00000344622 UBR3Q6ZT12 1888 aa9.45□□□□□ -0.9
GDNF-202ENST00000344622 TRIM37O94972 964 aa9.44□□□□□ -0.9
GDNF-202ENST00000344622 NEFMP07197 916 aa9.44□□□□□ -0.9
GDNF-202ENST00000344622 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
GDNF-202ENST00000344622 DNAJC10Q8IXB1 793 aa9.44□□□□□ -0.9
GDNF-202ENST00000344622 TAF1P21675 1872 aa9.44□□□□□ -0.9
GDNF-202ENST00000344622 SMC4Q9NTJ3 1288 aa9.44□□□□□ -0.9
GDNF-202ENST00000344622 COG6Q9Y2V7 657 aa9.44□□□□□ -0.9
GDNF-202ENST00000344622 AFDNP55196 1824 aaKnown RBP9.43□□□□□ -0.9
GDNF-202ENST00000344622 MYL6BP14649 208 aa9.43□□□□□ -0.9
GDNF-202ENST00000344622 LINC00116Q8NCU8 138 aa9.43□□□□□ -0.9
GDNF-202ENST00000344622 TMOD3Q9NYL9 352 aa9.43□□□□□ -0.9
GDNF-202ENST00000344622 RBM6P78332 1123 aaKnown RBP9.43□□□□□ -0.9
GDNF-202ENST00000344622 TMEM57Q8N5G2 664 aa9.43□□□□□ -0.9
GDNF-202ENST00000344622 ZNF831Q5JPB2 1677 aa9.43□□□□□ -0.9
GDNF-202ENST00000344622 INTS5Q6P9B9 1019 aaKnown RBP9.42□□□□□ -0.9
GDNF-202ENST00000344622 TTLL7Q6ZT98 887 aa9.42□□□□□ -0.9
GDNF-202ENST00000344622 PDGFDQ9GZP0 370 aaPredicted RBP9.42□□□□□ -0.9
GDNF-202ENST00000344622 PALLDQ8WX93 1383 aa9.42□□□□□ -0.9
GDNF-202ENST00000344622 KRT27Q7Z3Y8 459 aa9.42□□□□□ -0.9
GDNF-202ENST00000344622 ZBTB1Q9Y2K1 713 aa9.42□□□□□ -0.9
GDNF-202ENST00000344622 HDGFL1Q5TGJ6 251 aa9.42□□□□□ -0.9
GDNF-202ENST00000344622 CYP19A1P11511 503 aaPredicted RBP9.41□□□□□ -0.9
GDNF-202ENST00000344622 SLC51AQ86UW1 340 aa9.41□□□□□ -0.9
GDNF-202ENST00000344622 RXRBP28702 533 aa9.41□□□□□ -0.9
GDNF-202ENST00000344622 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
GDNF-202ENST00000344622 C1orf115Q9H7X2 142 aa9.41□□□□□ -0.9
GDNF-202ENST00000344622 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
GDNF-202ENST00000344622 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
GDNF-202ENST00000344622 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
GDNF-202ENST00000344622 BCORQ6W2J9 1755 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 ZNF772Q68DY9 489 aaPredicted RBP9.4□□□□□ -0.9
GDNF-202ENST00000344622 SYNE4Q8N205 404 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 ABCC4O15439 1325 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 SIK1P57059 783 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 FLIIQ13045 1269 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 ATF7IPQ6VMQ6 1270 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 SIRT2Q8IXJ6 389 aa9.4□□□□□ -0.9
GDNF-202ENST00000344622 CDCA7Q9BWT1 371 aaPredicted RBP9.4□□□□□ -0.9
GDNF-202ENST00000344622 AIMP1Q12904 312 aaKnown RBP9.4□□□□□ -0.91
GDNF-202ENST00000344622 HLFQ16534 295 aa9.4□□□□□ -0.91
GDNF-202ENST00000344622 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.91
GDNF-202ENST00000344622 CEP350Q5VT06 3117 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 IGHDP01880 384 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 IGKV5-2P06315 115 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 ALDH1L2Q3SY69 923 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 PI4KAP2A4QPH2 592 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 PI4KAP1Q8N8J0 262 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 BABAM1Q9NWV8 329 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.39□□□□□ -0.91
GDNF-202ENST00000344622 ANKRD36CQ5JPF3 1778 aa9.39□□□□□ -0.91
GDNF-202ENST00000344622 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
GDNF-202ENST00000344622 HSP90AB1P08238 724 aaKnown RBP9.38□□□□□ -0.91
GDNF-202ENST00000344622 COPS6Q7L5N1 327 aa9.38□□□□□ -0.91
GDNF-202ENST00000344622 KAZALD1Q96I82 304 aa9.38□□□□□ -0.91
GDNF-202ENST00000344622 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
GDNF-202ENST00000344622 SNRPA1P09661 255 aaKnown RBP9.38□□□□□ -0.91
GDNF-202ENST00000344622 DEFB132Q7Z7B7 95 aa9.38□□□□□ -0.91
GDNF-202ENST00000344622 NBPF7P0C2Y1 421 aaPredicted RBP9.37□□□□□ -0.91
GDNF-202ENST00000344622 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
GDNF-202ENST00000344622 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
GDNF-202ENST00000344622 XAGE3Q8WTP9 111 aa9.37□□□□□ -0.91
GDNF-202ENST00000344622 MEIS3Q99687 375 aa9.37□□□□□ -0.91
GDNF-202ENST00000344622 CRKLP46109 303 aaKnown RBP9.37□□□□□ -0.91
GDNF-202ENST00000344622 ZNF827Q17R98 1081 aa9.37□□□□□ -0.91
GDNF-202ENST00000344622 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
GDNF-202ENST00000344622 DDX60Q8IY21 1712 aaKnown RBP9.36□□□□□ -0.91
GDNF-202ENST00000344622 TTC5Q8N0Z6 440 aa9.36□□□□□ -0.91
GDNF-202ENST00000344622 ANO8Q9HCE9 1232 aaPredicted RBP9.36□□□□□ -0.91
GDNF-202ENST00000344622 CANXP27824 592 aaKnown RBP9.36□□□□□ -0.91
GDNF-202ENST00000344622 BCL2L12Q9HB09 334 aa9.36□□□□□ -0.91
GDNF-202ENST00000344622 BEND3Q5T5X7 828 aa9.36□□□□□ -0.91
GDNF-202ENST00000344622 BCL11BQ9C0K0 894 aaPredicted RBP9.36□□□□□ -0.91
GDNF-202ENST00000344622 DDX21Q9NR30 783 aaKnown RBP eCLIP9.36□□□□□ -0.91
GDNF-202ENST00000344622 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms