RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PRKRIP1Q9H875 184 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-201ENST00000344376 SRP68Q9UHB9 627 aaKnown RBP21.24■□□□□ 0.99
ATG4B-201ENST00000344376 PARP3Q9Y6F1 533 aa21.24■□□□□ 0.99
ATG4B-201ENST00000344376 COL15A1P39059 1388 aa21.24■□□□□ 0.99
ATG4B-201ENST00000344376 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
ATG4B-201ENST00000344376 CANXP27824 592 aaKnown RBP21.23■□□□□ 0.99
ATG4B-201ENST00000344376 TAF7Q15545 349 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-201ENST00000344376 KCNQ3O43525 872 aa21.22■□□□□ 0.99
ATG4B-201ENST00000344376 A0A087WZG4 1122 aa21.21■□□□□ 0.99
ATG4B-201ENST00000344376 PNISRQ8TF01 805 aaKnown RBP21.21■□□□□ 0.99
ATG4B-201ENST00000344376 FKBP8Q14318 412 aa21.2■□□□□ 0.98
ATG4B-201ENST00000344376 NPM2Q86SE8 214 aaKnown RBP21.2■□□□□ 0.98
ATG4B-201ENST00000344376 NARFQ9UHQ1 456 aa21.2■□□□□ 0.98
ATG4B-201ENST00000344376 USPL1Q5W0Q7 1092 aa21.19■□□□□ 0.98
ATG4B-201ENST00000344376 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
ATG4B-201ENST00000344376 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
ATG4B-201ENST00000344376 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
ATG4B-201ENST00000344376 EIF5P55010 431 aaKnown RBP21.18■□□□□ 0.98
ATG4B-201ENST00000344376 LMOD3Q0VAK6 560 aa21.18■□□□□ 0.98
ATG4B-201ENST00000344376 ZNF330Q9Y3S2 320 aaPredicted RBP21.18■□□□□ 0.98
ATG4B-201ENST00000344376 C10orf71Q711Q0 1435 aa21.17■□□□□ 0.98
ATG4B-201ENST00000344376 IL6STP40189 918 aaPredicted RBP21.17■□□□□ 0.98
ATG4B-201ENST00000344376 RIPK4P57078 832 aa21.16■□□□□ 0.98
ATG4B-201ENST00000344376 DLG5Q8TDM6 1919 aa21.16■□□□□ 0.98
ATG4B-201ENST00000344376 YBX3P16989 372 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATG4B-201ENST00000344376 TGFB2P61812 414 aa21.15■□□□□ 0.98
ATG4B-201ENST00000344376 A1BGP04217 495 aa21.14■□□□□ 0.98
ATG4B-201ENST00000344376 DDR1Q08345 913 aa21.14■□□□□ 0.98
ATG4B-201ENST00000344376 CCDC146Q8IYE0 955 aa21.14■□□□□ 0.98
ATG4B-201ENST00000344376 RUNDC1Q96C34 613 aa21.14■□□□□ 0.98
ATG4B-201ENST00000344376 THUMPD2Q9BTF0 503 aaKnown RBP21.14■□□□□ 0.98
ATG4B-201ENST00000344376 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.98
ATG4B-201ENST00000344376 TMPOP42166 694 aaKnown RBP21.14■□□□□ 0.97
ATG4B-201ENST00000344376 USP16Q9Y5T5 823 aa21.14■□□□□ 0.97
ATG4B-201ENST00000344376 TM4SF1P30408 202 aa21.13■□□□□ 0.97
ATG4B-201ENST00000344376 PRAMEF22A3QJZ6 481 aa21.12■□□□□ 0.97
ATG4B-201ENST00000344376 POLRMTO00411 1230 aaKnown RBP21.12■□□□□ 0.97
ATG4B-201ENST00000344376 ADAMTS8Q9UP79 889 aa21.12■□□□□ 0.97
ATG4B-201ENST00000344376 PXDNLA1KZ92 1463 aa21.12■□□□□ 0.97
ATG4B-201ENST00000344376 NFIXQ14938 502 aa21.11■□□□□ 0.97
ATG4B-201ENST00000344376 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
ATG4B-201ENST00000344376 KIF13BQ9NQT8 1826 aa21.11■□□□□ 0.97
ATG4B-201ENST00000344376 NEUROD2Q15784 382 aa21.1■□□□□ 0.97
ATG4B-201ENST00000344376 TSPYL4Q9UJ04 414 aa21.1■□□□□ 0.97
ATG4B-201ENST00000344376 WWC3Q9ULE0 1092 aa21.1■□□□□ 0.97
ATG4B-201ENST00000344376 TBC1D2BQ9UPU7 963 aa21.1■□□□□ 0.97
ATG4B-201ENST00000344376 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
ATG4B-201ENST00000344376 KDM3BQ7LBC6 1761 aa21.09■□□□□ 0.97
ATG4B-201ENST00000344376 EIF4A1P60842 406 aaKnown RBP21.09■□□□□ 0.97
ATG4B-201ENST00000344376 UTRNP46939 3433 aa21.08■□□□□ 0.97
ATG4B-201ENST00000344376 A0A0G2JLW4 131 aa21.08■□□□□ 0.97
ATG4B-201ENST00000344376 DZIP3Q86Y13 1208 aaKnown RBP21.08■□□□□ 0.97
ATG4B-201ENST00000344376 BABAM1Q9NWV8 329 aa21.08■□□□□ 0.97
ATG4B-201ENST00000344376 CHD4Q14839 1912 aa21.08■□□□□ 0.96
ATG4B-201ENST00000344376 SCN7AQ01118 1682 aa21.07■□□□□ 0.96
ATG4B-201ENST00000344376 DPEP1P16444 411 aa21.07■□□□□ 0.96
ATG4B-201ENST00000344376 PIP4K2AP48426 406 aaPredicted RBP21.07■□□□□ 0.96
ATG4B-201ENST00000344376 BICDL1Q6ZP65 573 aa21.07■□□□□ 0.96
ATG4B-201ENST00000344376 GIGYF1O75420 1035 aaPredicted RBP21.06■□□□□ 0.96
ATG4B-201ENST00000344376 SERPINB2P05120 415 aa21.06■□□□□ 0.96
ATG4B-201ENST00000344376 LAMB4A4D0S4 1761 aa21.06■□□□□ 0.96
ATG4B-201ENST00000344376 CAMTA2O94983 1202 aa21.06■□□□□ 0.96
ATG4B-201ENST00000344376 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
ATG4B-201ENST00000344376 ANP32CO43423 234 aa21.05■□□□□ 0.96
ATG4B-201ENST00000344376 TBC1D9BQ66K14 1250 aa21.05■□□□□ 0.96
ATG4B-201ENST00000344376 BCS1LQ9Y276 419 aa21.05■□□□□ 0.96
ATG4B-201ENST00000344376 KIAA1551Q9HCM1 1747 aa21.04■□□□□ 0.96
ATG4B-201ENST00000344376 GOLGB1Q14789 3259 aaKnown RBP21.04■□□□□ 0.96
ATG4B-201ENST00000344376 CARMIL3Q8ND23 1372 aa21.04■□□□□ 0.96
ATG4B-201ENST00000344376 NBPF26B4DH59 902 aa21.04■□□□□ 0.96
ATG4B-201ENST00000344376 NBPF10Q6P3W6 841 aaKnown RBP21.04■□□□□ 0.96
ATG4B-201ENST00000344376 NBPF15Q8N660 670 aa21.04■□□□□ 0.96
ATG4B-201ENST00000344376 N4BP2Q86UW6 1770 aaPredicted RBP21.03■□□□□ 0.96
ATG4B-201ENST00000344376 SETDB2Q96T68 719 aa21.03■□□□□ 0.96
ATG4B-201ENST00000344376 PIM2Q9P1W9 311 aa21.03■□□□□ 0.96
ATG4B-201ENST00000344376 CLEC4GQ6UXB4 293 aa21.02■□□□□ 0.96
ATG4B-201ENST00000344376 ZNF784Q8NCA9 323 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-201ENST00000344376 TRIM35Q9UPQ4 493 aa21.02■□□□□ 0.96
ATG4B-201ENST00000344376 NPHP1O15259 732 aa21.02■□□□□ 0.95
ATG4B-201ENST00000344376 NRXN2Q9P2S2 1712 aa21.01■□□□□ 0.95
ATG4B-201ENST00000344376 RGL2O15211 777 aa21.01■□□□□ 0.95
ATG4B-201ENST00000344376 DALRD3Q5D0E6 543 aaKnown RBP21.01■□□□□ 0.95
ATG4B-201ENST00000344376 BCORQ6W2J9 1755 aa21■□□□□ 0.95
ATG4B-201ENST00000344376 ERBB4Q15303 1308 aa21■□□□□ 0.95
ATG4B-201ENST00000344376 LAS1LQ9Y4W2 734 aaKnown RBP21■□□□□ 0.95
ATG4B-201ENST00000344376 KCNA3P22001 575 aa20.99■□□□□ 0.95
ATG4B-201ENST00000344376 CHRNA5P30532 468 aa20.99■□□□□ 0.95
ATG4B-201ENST00000344376 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
ATG4B-201ENST00000344376 APAF1O14727 1248 aa20.98■□□□□ 0.95
ATG4B-201ENST00000344376 CNBD1Q8NA66 436 aa20.98■□□□□ 0.95
ATG4B-201ENST00000344376 CHL1O00533 1208 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 ST5P78524 1137 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 CALD1Q05682 793 aaKnown RBP20.97■□□□□ 0.95
ATG4B-201ENST00000344376 KIF6Q6ZMV9 814 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 NGEFQ8N5V2 710 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 MYL6BP14649 208 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 PRR5LQ6MZQ0 368 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 MRS2Q9HD23 443 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 PDZRN3Q9UPQ7 1066 aa20.97■□□□□ 0.95
ATG4B-201ENST00000344376 H0YIN7 160 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms